RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 PCGF6Q9BYE7 350 aa14.39□□□□□ -0.11
CPNE1-214ENST00000435747 WASHC2AQ641Q2 1341 aa14.38□□□□□ -0.11
CPNE1-214ENST00000435747 MTHFSP49914 203 aa14.37□□□□□ -0.11
CPNE1-214ENST00000435747 CCDC93Q567U6 631 aa14.37□□□□□ -0.11
CPNE1-214ENST00000435747 CST9Q5W186 159 aa14.37□□□□□ -0.11
CPNE1-214ENST00000435747 STYK1Q6J9G0 422 aa14.37□□□□□ -0.11
CPNE1-214ENST00000435747 ZNF530Q6P9A1 599 aaPredicted RBP14.37□□□□□ -0.11
CPNE1-214ENST00000435747 CCDC24Q8N4L8 307 aa14.37□□□□□ -0.11
CPNE1-214ENST00000435747 NBPF15Q8N660 670 aa14.37□□□□□ -0.11
CPNE1-214ENST00000435747 NFATC2IPQ8NCF5 419 aa14.37□□□□□ -0.11
CPNE1-214ENST00000435747 PLEKHO1Q53GL0 409 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-214ENST00000435747 CIAPIN1Q6FI81 312 aa14.36□□□□□ -0.11
CPNE1-214ENST00000435747 GPC2Q8N158 579 aa14.36□□□□□ -0.11
CPNE1-214ENST00000435747 ZNF277Q9NRM2 450 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-214ENST00000435747 TRAF5O00463 557 aa14.35□□□□□ -0.11
CPNE1-214ENST00000435747 CYP19A1P11511 503 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-214ENST00000435747 LMOD1P29536 600 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-214ENST00000435747 FKBP4Q02790 459 aaKnown RBP eCLIP14.35□□□□□ -0.11
CPNE1-214ENST00000435747 PRR5LQ6MZQ0 368 aa14.35□□□□□ -0.11
CPNE1-214ENST00000435747 MASTLQ96GX5 879 aa14.35□□□□□ -0.11
CPNE1-214ENST00000435747 CARD14Q9BXL6 1004 aa14.35□□□□□ -0.11
CPNE1-214ENST00000435747 ZBTB1Q9Y2K1 713 aa14.35□□□□□ -0.11
CPNE1-214ENST00000435747 NPHP1O15259 732 aa14.34□□□□□ -0.11
CPNE1-214ENST00000435747 HABP4Q5JVS0 413 aaKnown RBP14.34□□□□□ -0.11
CPNE1-214ENST00000435747 C1orf141Q5JVX7 400 aa14.34□□□□□ -0.11
CPNE1-214ENST00000435747 SAPCD2Q86UD0 394 aa14.34□□□□□ -0.11
CPNE1-214ENST00000435747 CUL9Q8IWT3 2517 aa14.34□□□□□ -0.11
CPNE1-214ENST00000435747 FZD9O00144 591 aa14.33□□□□□ -0.12
CPNE1-214ENST00000435747 SRGNP10124 158 aa14.33□□□□□ -0.12
CPNE1-214ENST00000435747 CDCA8Q53HL2 280 aa14.33□□□□□ -0.12
CPNE1-214ENST00000435747 TBC1D9BQ66K14 1250 aa14.33□□□□□ -0.12
CPNE1-214ENST00000435747 HHIPL1Q96JK4 782 aa14.33□□□□□ -0.12
CPNE1-214ENST00000435747 AMOTQ4VCS5 1084 aa14.32□□□□□ -0.12
CPNE1-214ENST00000435747 GJA3Q9Y6H8 435 aa14.32□□□□□ -0.12
CPNE1-214ENST00000435747 CELF2O95319 508 aaKnown RBP14.31□□□□□ -0.12
CPNE1-214ENST00000435747 CANXP27824 592 aaKnown RBP14.31□□□□□ -0.12
CPNE1-214ENST00000435747 IARSP41252 1262 aaKnown RBP14.31□□□□□ -0.12
CPNE1-214ENST00000435747 ST5P78524 1137 aa14.31□□□□□ -0.12
CPNE1-214ENST00000435747 EIF4A2Q14240 407 aaKnown RBP14.31□□□□□ -0.12
CPNE1-214ENST00000435747 CNBD1Q8NA66 436 aa14.31□□□□□ -0.12
CPNE1-214ENST00000435747 C7orf43Q8WVR3 580 aa14.31□□□□□ -0.12
CPNE1-214ENST00000435747 SCN11AQ9UI33 1791 aa14.3□□□□□ -0.12
CPNE1-214ENST00000435747 A0A087WZG4 1122 aa14.3□□□□□ -0.12
CPNE1-214ENST00000435747 NOGQ13253 232 aa14.3□□□□□ -0.12
CPNE1-214ENST00000435747 RTKN2Q8IZC4 609 aa14.3□□□□□ -0.12
CPNE1-214ENST00000435747 EPS15P42566 896 aa14.29□□□□□ -0.12
CPNE1-214ENST00000435747 EIF6P56537 245 aaKnown RBP14.29□□□□□ -0.12
CPNE1-214ENST00000435747 USP50Q70EL3 339 aaPredicted RBP14.29□□□□□ -0.12
CPNE1-214ENST00000435747 JDP2Q8WYK2 163 aa14.29□□□□□ -0.12
CPNE1-214ENST00000435747 SCN7AQ01118 1682 aa14.29□□□□□ -0.12
CPNE1-214ENST00000435747 AKAP11Q9UKA4 1901 aa14.29□□□□□ -0.12
CPNE1-214ENST00000435747 BCORQ6W2J9 1755 aa14.28□□□□□ -0.12
CPNE1-214ENST00000435747 SCNN1DP51172 638 aa14.27□□□□□ -0.13
CPNE1-214ENST00000435747 CTU1Q7Z7A3 348 aaKnown RBP14.27□□□□□ -0.13
CPNE1-214ENST00000435747 SYNE4Q8N205 404 aa14.27□□□□□ -0.13
CPNE1-214ENST00000435747 CCER1Q8TC90 406 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-214ENST00000435747 ZIC5Q96T25 663 aa14.27□□□□□ -0.13
CPNE1-214ENST00000435747 SETDB2Q96T68 719 aa14.27□□□□□ -0.13
CPNE1-214ENST00000435747 SAGE1Q9NXZ1 904 aa14.27□□□□□ -0.13
CPNE1-214ENST00000435747 HSPA5P11021 654 aaKnown RBP14.26□□□□□ -0.13
CPNE1-214ENST00000435747 EIF5P55010 431 aaKnown RBP14.26□□□□□ -0.13
CPNE1-214ENST00000435747 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
CPNE1-214ENST00000435747 ZNF408Q9H9D4 720 aa14.26□□□□□ -0.13
CPNE1-214ENST00000435747 POLKQ9UBT6 870 aa14.26□□□□□ -0.13
CPNE1-214ENST00000435747 HPS5Q9UPZ3 1129 aa14.26□□□□□ -0.13
CPNE1-214ENST00000435747 NPR1P16066 1061 aa14.25□□□□□ -0.13
CPNE1-214ENST00000435747 SLC39A6Q13433 755 aa14.25□□□□□ -0.13
CPNE1-214ENST00000435747 AKAP4Q5JQC9 854 aa14.25□□□□□ -0.13
CPNE1-214ENST00000435747 FXR1P51114 621 aaKnown RBP eCLIP14.24□□□□□ -0.13
CPNE1-214ENST00000435747 EIF4G2P78344 907 aaKnown RBP eCLIP14.24□□□□□ -0.13
CPNE1-214ENST00000435747 VSIG10Q8N0Z9 540 aa14.24□□□□□ -0.13
CPNE1-214ENST00000435747 GLIS2Q9BZE0 524 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-214ENST00000435747 SLC52A2Q9HAB3 445 aa14.24□□□□□ -0.13
CPNE1-214ENST00000435747 TBC1D2BQ9UPU7 963 aa14.24□□□□□ -0.13
CPNE1-214ENST00000435747 ZNF330Q9Y3S2 320 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-214ENST00000435747 CEP290O15078 2479 aa14.24□□□□□ -0.13
CPNE1-214ENST00000435747 TRIOBPQ9H2D6 2365 aa14.24□□□□□ -0.13
CPNE1-214ENST00000435747 MKI67P46013 3256 aaKnown RBP14.23□□□□□ -0.13
CPNE1-214ENST00000435747 DLL1O00548 723 aa14.23□□□□□ -0.13
CPNE1-214ENST00000435747 STARD3NLO95772 234 aa14.23□□□□□ -0.13
CPNE1-214ENST00000435747 TRPA1O75762 1119 aa14.22□□□□□ -0.13
CPNE1-214ENST00000435747 HUNKP57058 714 aa14.22□□□□□ -0.13
CPNE1-214ENST00000435747 PSMD1Q99460 953 aa14.22□□□□□ -0.13
CPNE1-214ENST00000435747 ADARB2Q9NS39 739 aaKnown RBP14.22□□□□□ -0.13
CPNE1-214ENST00000435747 A0A0C4DFX4 3053 aa14.22□□□□□ -0.13
CPNE1-214ENST00000435747 NPM2Q86SE8 214 aaKnown RBP14.21□□□□□ -0.13
CPNE1-214ENST00000435747 RNF186Q9NXI6 227 aa14.21□□□□□ -0.13
CPNE1-214ENST00000435747 COL4A5P29400 1685 aa14.2□□□□□ -0.14
CPNE1-214ENST00000435747 PKN2Q16513 984 aaKnown RBP14.2□□□□□ -0.14
CPNE1-214ENST00000435747 NBPF5PQ86XG9 351 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-214ENST00000435747 AEBP1Q8IUX7 1158 aa14.2□□□□□ -0.14
CPNE1-214ENST00000435747 SZT2Q5T011 3432 aa14.19□□□□□ -0.14
CPNE1-214ENST00000435747 KIF23Q02241 960 aaPredicted RBP14.19□□□□□ -0.14
CPNE1-214ENST00000435747 LARGE2Q8N3Y3 721 aa14.19□□□□□ -0.14
CPNE1-214ENST00000435747 GPRC5DQ9NZD1 345 aa14.19□□□□□ -0.14
CPNE1-214ENST00000435747 UBR2Q8IWV8 1755 aa14.19□□□□□ -0.14
CPNE1-214ENST00000435747 MRC1P22897 1456 aa14.18□□□□□ -0.14
CPNE1-214ENST00000435747 KIAA0100Q14667 2235 aaKnown RBP14.18□□□□□ -0.14
CPNE1-214ENST00000435747 ALDH1B1P30837 517 aa14.18□□□□□ -0.14
CPNE1-214ENST00000435747 TNNT2P45379 298 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms