RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 APBB1O00213 710 aa17.77■□□□□ 0.43
DDX56-205ENST00000433257 SLC4A10Q6U841 1118 aa17.77■□□□□ 0.43
DDX56-205ENST00000433257 AEBP1Q8IUX7 1158 aa17.77■□□□□ 0.43
DDX56-205ENST00000433257 RGS17Q9UGC6 210 aaPredicted RBP17.77■□□□□ 0.43
DDX56-205ENST00000433257 TRPC5Q9UL62 973 aaPredicted RBP17.77■□□□□ 0.43
DDX56-205ENST00000433257 AMPHP49418 695 aa17.76■□□□□ 0.43
DDX56-205ENST00000433257 USP54Q70EL1 1684 aa17.75■□□□□ 0.43
DDX56-205ENST00000433257 FLIIQ13045 1269 aa17.75■□□□□ 0.43
DDX56-205ENST00000433257 ZMYND15Q9H091 742 aa17.75■□□□□ 0.43
DDX56-205ENST00000433257 STRN4Q9NRL3 753 aa17.75■□□□□ 0.43
DDX56-205ENST00000433257 HDAC5Q9UQL6 1122 aa17.75■□□□□ 0.43
DDX56-205ENST00000433257 SLIT2O94813 1529 aa17.75■□□□□ 0.43
DDX56-205ENST00000433257 COL14A1Q05707 1796 aaKnown RBP17.75■□□□□ 0.43
DDX56-205ENST00000433257 UBE2HP62256 183 aa17.74■□□□□ 0.43
DDX56-205ENST00000433257 RILPL2Q969X0 211 aa17.74■□□□□ 0.43
DDX56-205ENST00000433257 CCDC9Q9Y3X0 531 aaKnown RBP17.74■□□□□ 0.43
DDX56-205ENST00000433257 IGSF1Q8N6C5 1336 aa17.74■□□□□ 0.43
DDX56-205ENST00000433257 RUFY2Q8WXA3 655 aa17.74■□□□□ 0.43
DDX56-205ENST00000433257 BCL9LQ86UU0 1499 aa17.73■□□□□ 0.43
DDX56-205ENST00000433257 NFAT5O94916 1531 aa17.73■□□□□ 0.43
DDX56-205ENST00000433257 KRT24Q2M2I5 525 aa17.73■□□□□ 0.43
DDX56-205ENST00000433257 CNTROBQ8N137 903 aa17.73■□□□□ 0.43
DDX56-205ENST00000433257 SSH3Q8TE77 659 aa17.73■□□□□ 0.43
DDX56-205ENST00000433257 ZSCAN31Q96LW9 406 aaPredicted RBP17.73■□□□□ 0.43
DDX56-205ENST00000433257 EXOC6BQ9Y2D4 811 aa17.73■□□□□ 0.43
DDX56-205ENST00000433257 AXIN2Q9Y2T1 843 aa17.73■□□□□ 0.43
DDX56-205ENST00000433257 MAP3K19Q56UN5 1328 aa17.73■□□□□ 0.43
DDX56-205ENST00000433257 RAD50Q92878 1312 aa17.73■□□□□ 0.43
DDX56-205ENST00000433257 RPAP1Q9BWH6 1393 aaPredicted RBP17.72■□□□□ 0.43
DDX56-205ENST00000433257 UBTFL1P0CB47 393 aaPredicted RBP17.72■□□□□ 0.43
DDX56-205ENST00000433257 FKBP5Q13451 457 aaPredicted RBP17.72■□□□□ 0.43
DDX56-205ENST00000433257 PIBF1Q8WXW3 757 aa17.72■□□□□ 0.43
DDX56-205ENST00000433257 IP6K1Q92551 441 aa17.72■□□□□ 0.43
DDX56-205ENST00000433257 MAP3K5Q99683 1374 aa17.72■□□□□ 0.43
DDX56-205ENST00000433257 ZSCAN22P10073 491 aaPredicted RBP17.71■□□□□ 0.43
DDX56-205ENST00000433257 RXRBP28702 533 aa17.71■□□□□ 0.43
DDX56-205ENST00000433257 VPS72Q15906 364 aa17.71■□□□□ 0.43
DDX56-205ENST00000433257 POTEAQ6S8J7 498 aa17.71■□□□□ 0.43
DDX56-205ENST00000433257 MYRIPQ8NFW9 859 aa17.71■□□□□ 0.43
DDX56-205ENST00000433257 LIMCH1Q9UPQ0 1083 aa17.71■□□□□ 0.43
DDX56-205ENST00000433257 GOLGA6L6A8MZA4 724 aa17.71■□□□□ 0.42
DDX56-205ENST00000433257 HOXB7P09629 217 aa17.71■□□□□ 0.42
DDX56-205ENST00000433257 CSB-PGBD3P0DP91 1061 aa17.71■□□□□ 0.42
DDX56-205ENST00000433257 MTHFSDQ2M296 383 aaKnown RBP17.71■□□□□ 0.42
DDX56-205ENST00000433257 USP48Q86UV5 1035 aa17.71■□□□□ 0.42
DDX56-205ENST00000433257 KIF1BPQ96EK5 621 aa17.71■□□□□ 0.42
DDX56-205ENST00000433257 SH2B1Q9NRF2 756 aaPredicted RBP17.71■□□□□ 0.42
DDX56-205ENST00000433257 TTC41PQ6P2S7 1318 aa17.7■□□□□ 0.42
DDX56-205ENST00000433257 GNAT3A8MTJ3 354 aa17.7■□□□□ 0.42
DDX56-205ENST00000433257 GTF2F1P35269 517 aaKnown RBP eCLIP17.7■□□□□ 0.421e-7■■■■■ 30.9
DDX56-205ENST00000433257 G2E3Q7L622 706 aa17.7■□□□□ 0.42
DDX56-205ENST00000433257 GJD4Q96KN9 370 aaPredicted RBP17.7■□□□□ 0.42
DDX56-205ENST00000433257 USP42Q9H9J4 1324 aaKnown RBP17.7■□□□□ 0.42
DDX56-205ENST00000433257 SGSM2O43147 1006 aa17.69■□□□□ 0.42
DDX56-205ENST00000433257 HOXC9P31274 260 aa17.69■□□□□ 0.42
DDX56-205ENST00000433257 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
DDX56-205ENST00000433257 HSP90AB2PQ58FF8 381 aa17.69■□□□□ 0.42
DDX56-205ENST00000433257 SMAP1Q8IYB5 467 aaPredicted RBP17.69■□□□□ 0.42
DDX56-205ENST00000433257 FAM13BQ9NYF5 915 aa17.69■□□□□ 0.42
DDX56-205ENST00000433257 USP25Q9UHP3 1055 aa17.69■□□□□ 0.42
DDX56-205ENST00000433257 PALD1Q9ULE6 856 aa17.69■□□□□ 0.42
DDX56-205ENST00000433257 NSFL1CQ9UNZ2 370 aaKnown RBP17.69■□□□□ 0.42
DDX56-205ENST00000433257 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDX56-205ENST00000433257 PLCH1Q4KWH8 1693 aa17.69■□□□□ 0.42
DDX56-205ENST00000433257 CAMTA1Q9Y6Y1 1673 aa17.69■□□□□ 0.42
DDX56-205ENST00000433257 NWD2Q9ULI1 1742 aa17.69■□□□□ 0.42
DDX56-205ENST00000433257 F6X3S4 739 aa17.68■□□□□ 0.42
DDX56-205ENST00000433257 POLA2Q14181 598 aa17.68■□□□□ 0.42
DDX56-205ENST00000433257 TOM1L2Q6ZVM7 507 aa17.68■□□□□ 0.42
DDX56-205ENST00000433257 TM6SF1Q9BZW5 370 aa17.68■□□□□ 0.42
DDX56-205ENST00000433257 DNTTIP2Q5QJE6 756 aaKnown RBP17.67■□□□□ 0.42
DDX56-205ENST00000433257 LARP1Q6PKG0 1096 aaKnown RBP17.67■□□□□ 0.42
DDX56-205ENST00000433257 ANKRD24Q8TF21 1146 aa17.67■□□□□ 0.42
DDX56-205ENST00000433257 SMC3Q9UQE7 1217 aa17.67■□□□□ 0.42
DDX56-205ENST00000433257 STX6O43752 255 aa17.67■□□□□ 0.42
DDX56-205ENST00000433257 RNF214Q8ND24 703 aa17.67■□□□□ 0.42
DDX56-205ENST00000433257 LTV1Q96GA3 475 aaPredicted RBP17.67■□□□□ 0.42
DDX56-205ENST00000433257 GPATCH3Q96I76 525 aa17.67■□□□□ 0.42
DDX56-205ENST00000433257 LTN1O94822 1766 aa17.67■□□□□ 0.42
DDX56-205ENST00000433257 COL5A2P05997 1499 aaPredicted RBP17.66■□□□□ 0.42
DDX56-205ENST00000433257 ATRNO75882 1429 aa17.66■□□□□ 0.42
DDX56-205ENST00000433257 WDR17Q8IZU2 1322 aa17.66■□□□□ 0.42
DDX56-205ENST00000433257 PNMA6EA0A0J9YXQ4 647 aa17.66■□□□□ 0.42
DDX56-205ENST00000433257 HIP1O00291 1037 aa17.66■□□□□ 0.42
DDX56-205ENST00000433257 F13A1P00488 732 aa17.66■□□□□ 0.42
DDX56-205ENST00000433257 CHAF1AQ13111 956 aaPredicted RBP17.66■□□□□ 0.42
DDX56-205ENST00000433257 TAF7Q15545 349 aaPredicted RBP17.66■□□□□ 0.42
DDX56-205ENST00000433257 TTC14Q96N46 770 aa17.66■□□□□ 0.42
DDX56-205ENST00000433257 DIAPH3Q9NSV4 1193 aa17.66■□□□□ 0.42
DDX56-205ENST00000433257 SPTLC3Q9NUV7 552 aa17.66■□□□□ 0.42
DDX56-205ENST00000433257 LRRFIP2Q9Y608 721 aaKnown RBP17.66■□□□□ 0.42
DDX56-205ENST00000433257 LMO7Q8WWI1 1683 aa17.65■□□□□ 0.42
DDX56-205ENST00000433257 ABCC6O95255 1503 aa17.65■□□□□ 0.42
DDX56-205ENST00000433257 CCDC171Q6TFL3 1326 aa17.65■□□□□ 0.42
DDX56-205ENST00000433257 GLRX3O76003 335 aaKnown RBP17.65■□□□□ 0.42
DDX56-205ENST00000433257 VPS53Q5VIR6 699 aa17.65■□□□□ 0.42
DDX56-205ENST00000433257 ERBB3P21860 1342 aa17.65■□□□□ 0.42
DDX56-205ENST00000433257 SPATA31A5Q5VU36 1347 aa17.65■□□□□ 0.42
DDX56-205ENST00000433257 SPATA31A7Q8IWB4 1347 aa17.65■□□□□ 0.42
DDX56-205ENST00000433257 KDM4AO75164 1064 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 1256.7 ms