RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 TRIM37O94972 964 aa15.23■□□□□ 0.03
RFC4-206ENST00000427785 CRKLP46109 303 aaKnown RBP15.23■□□□□ 0.03
RFC4-206ENST00000427785 RIC3Q7Z5B4 369 aa15.23■□□□□ 0.03
RFC4-206ENST00000427785 LINC00116Q8NCU8 138 aa15.23■□□□□ 0.03
RFC4-206ENST00000427785 CCDC87Q9NVE4 849 aa15.23■□□□□ 0.03
RFC4-206ENST00000427785 PCDHB15Q9Y5E8 787 aa15.23■□□□□ 0.03
RFC4-206ENST00000427785 CASZ1Q86V15 1759 aa15.23■□□□□ 0.03
RFC4-206ENST00000427785 AAMPQ13685 434 aa15.22■□□□□ 0.03
RFC4-206ENST00000427785 BEND3Q5T5X7 828 aa15.22■□□□□ 0.03
RFC4-206ENST00000427785 SRCIN1Q9C0H9 1055 aa15.22■□□□□ 0.03
RFC4-206ENST00000427785 CCNL1Q9UK58 526 aaPredicted RBP15.22■□□□□ 0.03
RFC4-206ENST00000427785 MYH3P11055 1940 aa15.21■□□□□ 0.03
RFC4-206ENST00000427785 ILDR1Q86SU0 546 aaPredicted RBP15.21■□□□□ 0.03
RFC4-206ENST00000427785 MYD88Q99836 296 aa15.21■□□□□ 0.03
RFC4-206ENST00000427785 ZBTB3Q9H5J0 574 aa15.21■□□□□ 0.03
RFC4-206ENST00000427785 KDM2BQ8NHM5 1336 aa15.2■□□□□ 0.02
RFC4-206ENST00000427785 CWF19L2Q2TBE0 894 aaKnown RBP15.2■□□□□ 0.02
RFC4-206ENST00000427785 INTS5Q6P9B9 1019 aaKnown RBP15.2■□□□□ 0.02
RFC4-206ENST00000427785 ANKRD13DQ6ZTN6 518 aa15.2■□□□□ 0.02
RFC4-206ENST00000427785 PLBD2Q8NHP8 589 aa15.2■□□□□ 0.02
RFC4-206ENST00000427785 METTL22Q9BUU2 404 aaPredicted RBP15.2■□□□□ 0.02
RFC4-206ENST00000427785 CHMP4BQ9H444 224 aaKnown RBP15.2■□□□□ 0.02
RFC4-206ENST00000427785 COL15A1P39059 1388 aa15.2■□□□□ 0.02
RFC4-206ENST00000427785 CNTNAP4Q9C0A0 1308 aa15.19■□□□□ 0.02
RFC4-206ENST00000427785 LAMB2P55268 1798 aa15.19■□□□□ 0.02
RFC4-206ENST00000427785 KIF6Q6ZMV9 814 aa15.19■□□□□ 0.02
RFC4-206ENST00000427785 EP400Q96L91 3159 aa15.18■□□□□ 0.02
RFC4-206ENST00000427785 ALDH1L1O75891 902 aa15.18■□□□□ 0.02
RFC4-206ENST00000427785 IGHDP01880 384 aa15.18■□□□□ 0.02
RFC4-206ENST00000427785 IGKV5-2P06315 115 aa15.18■□□□□ 0.02
RFC4-206ENST00000427785 LINS1Q8NG48 757 aa15.18■□□□□ 0.02
RFC4-206ENST00000427785 MAP3K15Q6ZN16 1313 aa15.17■□□□□ 0.02
RFC4-206ENST00000427785 COL24A1Q17RW2 1714 aa15.17■□□□□ 0.02
RFC4-206ENST00000427785 NEURL1BA8MQ27 555 aa15.17■□□□□ 0.02
RFC4-206ENST00000427785 UBTFL1P0CB47 393 aaPredicted RBP15.17■□□□□ 0.02
RFC4-206ENST00000427785 IL6STP40189 918 aaPredicted RBP15.17■□□□□ 0.02
RFC4-206ENST00000427785 NEXNQ0ZGT2 675 aa15.17■□□□□ 0.02
RFC4-206ENST00000427785 CENPQQ7L2Z9 268 aaPredicted RBP15.17■□□□□ 0.02
RFC4-206ENST00000427785 ARXQ96QS3 562 aa15.17■□□□□ 0.02
RFC4-206ENST00000427785 ATP5J2-PTCD1G3V325 749 aa15.16■□□□□ 0.02
RFC4-206ENST00000427785 DZIP3Q86Y13 1208 aaKnown RBP15.16■□□□□ 0.02
RFC4-206ENST00000427785 USP44Q9H0E7 712 aa15.16■□□□□ 0.02
RFC4-206ENST00000427785 LRRFIP2Q9Y608 721 aaKnown RBP15.16■□□□□ 0.02
RFC4-206ENST00000427785 DDX60Q8IY21 1712 aaKnown RBP15.15■□□□□ 0.02
RFC4-206ENST00000427785 GNAI3P08754 354 aa15.15■□□□□ 0.02
RFC4-206ENST00000427785 EIF5P55010 431 aaKnown RBP15.15■□□□□ 0.02
RFC4-206ENST00000427785 TBC1D2BQ9UPU7 963 aa15.15■□□□□ 0.02
RFC4-206ENST00000427785 GNPATO15228 680 aa15.14■□□□□ 0.01
RFC4-206ENST00000427785 GNAI2P04899 355 aa15.14■□□□□ 0.01
RFC4-206ENST00000427785 NBPF7P0C2Y1 421 aaPredicted RBP15.14■□□□□ 0.01
RFC4-206ENST00000427785 CEP85Q6P2H3 762 aa15.14■□□□□ 0.01
RFC4-206ENST00000427785 SMIM5Q71RC9 77 aa15.14■□□□□ 0.01
RFC4-206ENST00000427785 NPM2Q86SE8 214 aaKnown RBP15.14■□□□□ 0.01
RFC4-206ENST00000427785 LRRC4BQ9NT99 713 aa15.14■□□□□ 0.01
RFC4-206ENST00000427785 IBTKQ9P2D0 1353 aaPredicted RBP15.13■□□□□ 0.01
RFC4-206ENST00000427785 SPEF2Q9C093 1822 aa15.13■□□□□ 0.01
RFC4-206ENST00000427785 GRM8O00222 908 aa15.13■□□□□ 0.01
RFC4-206ENST00000427785 HDAC1Q13547 482 aaPredicted RBP15.13■□□□□ 0.01
RFC4-206ENST00000427785 HLFQ16534 295 aa15.13■□□□□ 0.01
RFC4-206ENST00000427785 SKAP1Q86WV1 359 aa15.13■□□□□ 0.01
RFC4-206ENST00000427785 SIRT2Q8IXJ6 389 aa15.13■□□□□ 0.01
RFC4-206ENST00000427785 RWDD1Q9H446 243 aaPredicted RBP15.13■□□□□ 0.01
RFC4-206ENST00000427785 C9orf78Q9NZ63 289 aaPredicted RBP15.13■□□□□ 0.01
RFC4-206ENST00000427785 APBA3O96018 575 aa15.12■□□□□ 0.01
RFC4-206ENST00000427785 GCKRQ14397 625 aa15.12■□□□□ 0.01
RFC4-206ENST00000427785 ANKRD44Q8N8A2 993 aa15.12■□□□□ 0.01
RFC4-206ENST00000427785 AK7Q96M32 723 aa15.12■□□□□ 0.01
RFC4-206ENST00000427785 CAMTA2O94983 1202 aa15.11■□□□□ 0.01
RFC4-206ENST00000427785 GPTP24298 496 aa15.11■□□□□ 0.01
RFC4-206ENST00000427785 TXNRD1Q16881 649 aa15.11■□□□□ 0.01
RFC4-206ENST00000427785 SLC27A3Q5K4L6 730 aa15.11■□□□□ 0.01
RFC4-206ENST00000427785 RC3H1Q5TC82 1133 aaKnown RBP15.11■□□□□ 0.01
RFC4-206ENST00000427785 GIGYF2Q6Y7W6 1299 aaKnown RBP15.11■□□□□ 0.01
RFC4-206ENST00000427785 UBE3BQ7Z3V4 1068 aa15.11■□□□□ 0.01
RFC4-206ENST00000427785 AMIGO3Q86WK7 504 aa15.11■□□□□ 0.01
RFC4-206ENST00000427785 JARID2Q92833 1246 aaPredicted RBP15.11■□□□□ 0.01
RFC4-206ENST00000427785 SUCLG2Q96I99 432 aa15.11■□□□□ 0.01
RFC4-206ENST00000427785 CWC25Q9NXE8 425 aaPredicted RBP15.11■□□□□ 0.01
RFC4-206ENST00000427785 QSER1Q2KHR3 1735 aa15.11■□□□□ 0.01
RFC4-206ENST00000427785 UTYO14607 1347 aa15.11■□□□□ 0.01
RFC4-206ENST00000427785 RPS6KA4O75676 772 aa15.1■□□□□ 0.01
RFC4-206ENST00000427785 PHF14O94880 888 aa15.1■□□□□ 0.01
RFC4-206ENST00000427785 TCIRG1Q13488 830 aa15.1■□□□□ 0.01
RFC4-206ENST00000427785 ISCA1Q9BUE6 129 aa15.1■□□□□ 0.01
RFC4-206ENST00000427785 A0A087WZG4 1122 aa15.09■□□□□ 0.01
RFC4-206ENST00000427785 ERVV-1B6SEH8 477 aa15.09■□□□□ 0.01
RFC4-206ENST00000427785 HSP90AB3PQ58FF7 597 aa15.09■□□□□ 0.01
RFC4-206ENST00000427785 UBN2Q6ZU65 1347 aa15.09■□□□□ 0.01
RFC4-206ENST00000427785 PNMA6EA0A0J9YXQ4 647 aa15.08■□□□□ 0
RFC4-206ENST00000427785 RTL5Q5HYW3 569 aaPredicted RBP15.08■□□□□ 0
RFC4-206ENST00000427785 RPAP2Q8IXW5 612 aaPredicted RBP15.08■□□□□ 0
RFC4-206ENST00000427785 CCDC191Q8NCU4 936 aa15.08■□□□□ 0
RFC4-206ENST00000427785 SRP68Q9UHB9 627 aaKnown RBP15.08■□□□□ 0
RFC4-206ENST00000427785 RTCBQ9Y3I0 505 aaKnown RBP15.08■□□□□ 0
RFC4-206ENST00000427785 HMMRO75330 724 aa15.07■□□□□ 0
RFC4-206ENST00000427785 CASP7P55210 303 aa15.07■□□□□ 0
RFC4-206ENST00000427785 SMC5Q8IY18 1101 aa15.07■□□□□ 0
RFC4-206ENST00000427785 PROM2Q8N271 834 aa15.07■□□□□ 0
RFC4-206ENST00000427785 KAZALD1Q96I82 304 aa15.07■□□□□ 0
RFC4-206ENST00000427785 BICC1Q9H694 974 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms