RNA–Protein interactions for RNA: ENST00000426856.1

CRIM1-203, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-203ENST00000426856 NPM2Q86SE8 214 aaKnown RBP20.34■□□□□ 0.85
CRIM1-203ENST00000426856 PDZRN3Q9UPQ7 1066 aa20.34■□□□□ 0.85
CRIM1-203ENST00000426856 ARFGEF2Q9Y6D5 1785 aa20.34■□□□□ 0.85
CRIM1-203ENST00000426856 DCTN1Q14203 1278 aa20.33■□□□□ 0.85
CRIM1-203ENST00000426856 POTECB2RU33 542 aa20.32■□□□□ 0.84
CRIM1-203ENST00000426856 NPHP1O15259 732 aa20.32■□□□□ 0.84
CRIM1-203ENST00000426856 RTF1Q92541 710 aaKnown RBP20.32■□□□□ 0.84
CRIM1-203ENST00000426856 SNRPA1P09661 255 aaKnown RBP20.31■□□□□ 0.84
CRIM1-203ENST00000426856 SRGNP10124 158 aa20.31■□□□□ 0.84
CRIM1-203ENST00000426856 ST5P78524 1137 aa20.31■□□□□ 0.84
CRIM1-203ENST00000426856 JMYQ8N9B5 988 aa20.31■□□□□ 0.84
CRIM1-203ENST00000426856 NBPF26B4DH59 902 aa20.3■□□□□ 0.84
CRIM1-203ENST00000426856 ERFEQ4G0M1 354 aa20.3■□□□□ 0.84
CRIM1-203ENST00000426856 STYK1Q6J9G0 422 aa20.3■□□□□ 0.84
CRIM1-203ENST00000426856 PRPF40BQ6NWY9 871 aaKnown RBP20.3■□□□□ 0.84
CRIM1-203ENST00000426856 NBPF10Q6P3W6 841 aaKnown RBP20.3■□□□□ 0.84
CRIM1-203ENST00000426856 NBPF15Q8N660 670 aa20.3■□□□□ 0.84
CRIM1-203ENST00000426856 LTBP3Q9NS15 1303 aa20.29■□□□□ 0.84
CRIM1-203ENST00000426856 CNKSR1Q969H4 720 aa20.29■□□□□ 0.84
CRIM1-203ENST00000426856 TAOK3Q9H2K8 898 aa20.29■□□□□ 0.84
CRIM1-203ENST00000426856 CLEC4GQ6UXB4 293 aa20.28■□□□□ 0.84
CRIM1-203ENST00000426856 NBPF5PQ86XG9 351 aaPredicted RBP20.28■□□□□ 0.84
CRIM1-203ENST00000426856 MASTLQ96GX5 879 aa20.28■□□□□ 0.84
CRIM1-203ENST00000426856 LAMB4A4D0S4 1761 aa20.28■□□□□ 0.84
CRIM1-203ENST00000426856 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
CRIM1-203ENST00000426856 DPY19L2Q6NUT2 758 aa20.27■□□□□ 0.84
CRIM1-203ENST00000426856 HTATSF1O43719 755 aaKnown RBP20.26■□□□□ 0.83
CRIM1-203ENST00000426856 MIS18AQ9NYP9 233 aa20.26■□□□□ 0.83
CRIM1-203ENST00000426856 ZNF652Q9Y2D9 606 aa20.26■□□□□ 0.83
CRIM1-203ENST00000426856 NIP7Q9Y221 180 aaKnown RBP eCLIP20.25■□□□□ 0.83
CRIM1-203ENST00000426856 KDM3BQ7LBC6 1761 aa20.24■□□□□ 0.83
CRIM1-203ENST00000426856 TAF7Q15545 349 aaPredicted RBP20.24■□□□□ 0.83
CRIM1-203ENST00000426856 C7orf43Q8WVR3 580 aa20.24■□□□□ 0.83
CRIM1-203ENST00000426856 DDNO94850 711 aaPredicted RBP20.23■□□□□ 0.83
CRIM1-203ENST00000426856 HLFQ16534 295 aa20.23■□□□□ 0.83
CRIM1-203ENST00000426856 SOGA3Q5TF21 947 aa20.23■□□□□ 0.83
CRIM1-203ENST00000426856 KLRG2A4D1S0 409 aaPredicted RBP20.22■□□□□ 0.83
CRIM1-203ENST00000426856 FAM177BA6PVY3 158 aa20.22■□□□□ 0.83
CRIM1-203ENST00000426856 NPR1P16066 1061 aa20.22■□□□□ 0.83
CRIM1-203ENST00000426856 RGL2O15211 777 aa20.21■□□□□ 0.83
CRIM1-203ENST00000426856 POTEIP0CG38 1075 aa20.21■□□□□ 0.83
CRIM1-203ENST00000426856 POTEJP0CG39 1038 aa20.21■□□□□ 0.83
CRIM1-203ENST00000426856 COL13A1Q5TAT6 717 aaPredicted RBP20.21■□□□□ 0.83
CRIM1-203ENST00000426856 OLFM4Q6UX06 510 aa20.21■□□□□ 0.83
CRIM1-203ENST00000426856 TPTE2Q6XPS3 522 aa20.21■□□□□ 0.83
CRIM1-203ENST00000426856 CCDC93Q567U6 631 aa20.2■□□□□ 0.82
CRIM1-203ENST00000426856 PLEKHF1Q96S99 279 aa20.19■□□□□ 0.82
CRIM1-203ENST00000426856 THUMPD2Q9BTF0 503 aaKnown RBP20.19■□□□□ 0.82
CRIM1-203ENST00000426856 NUP98P52948 1817 aa20.18■□□□□ 0.82
CRIM1-203ENST00000426856 NGEFQ8N5V2 710 aa20.18■□□□□ 0.82
CRIM1-203ENST00000426856 ABCC12Q96J65 1359 aa20.18■□□□□ 0.82
CRIM1-203ENST00000426856 CHADLQ6NUI6 762 aa20.17■□□□□ 0.82
CRIM1-203ENST00000426856 ZNF277Q9NRM2 450 aaPredicted RBP20.17■□□□□ 0.82
CRIM1-203ENST00000426856 SCN4AP35499 1836 aa20.16■□□□□ 0.82
CRIM1-203ENST00000426856 EIF4A1P60842 406 aaKnown RBP20.16■□□□□ 0.82
CRIM1-203ENST00000426856 FKBP4Q02790 459 aaKnown RBP eCLIP20.16■□□□□ 0.829e-6■□□□□ 10.4
CRIM1-203ENST00000426856 ZNF541Q9H0D2 1346 aa20.16■□□□□ 0.82
CRIM1-203ENST00000426856 NEFMP07197 916 aa20.15■□□□□ 0.82
CRIM1-203ENST00000426856 NFE2L2Q16236 605 aa20.15■□□□□ 0.82
CRIM1-203ENST00000426856 TTLL7Q6ZT98 887 aa20.15■□□□□ 0.82
CRIM1-203ENST00000426856 NUTM1Q86Y26 1132 aa20.15■□□□□ 0.82
CRIM1-203ENST00000426856 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
CRIM1-203ENST00000426856 L3MBTL3Q96JM7 780 aaPredicted RBP20.15■□□□□ 0.82
CRIM1-203ENST00000426856 SNED1Q8TER0 1413 aa20.15■□□□□ 0.82
CRIM1-203ENST00000426856 MAP3K15Q6ZN16 1313 aa20.14■□□□□ 0.81
CRIM1-203ENST00000426856 HSPA1AP0DMV8 641 aaKnown RBP20.14■□□□□ 0.81
CRIM1-203ENST00000426856 HSPA1BP0DMV9 641 aaKnown RBP20.14■□□□□ 0.81
CRIM1-203ENST00000426856 GTF2E1P29083 439 aaPredicted RBP20.14■□□□□ 0.81
CRIM1-203ENST00000426856 RRP7AQ9Y3A4 280 aaKnown RBP20.14■□□□□ 0.81
CRIM1-203ENST00000426856 UBN2Q6ZU65 1347 aa20.13■□□□□ 0.81
CRIM1-203ENST00000426856 ERVV-1B6SEH8 477 aa20.13■□□□□ 0.81
CRIM1-203ENST00000426856 CRY2Q49AN0 593 aa20.13■□□□□ 0.81
CRIM1-203ENST00000426856 RTKN2Q8IZC4 609 aa20.13■□□□□ 0.81
CRIM1-203ENST00000426856 TAF1DQ9H5J8 278 aaPredicted RBP20.13■□□□□ 0.81
CRIM1-203ENST00000426856 IQCA1LA6NCM1 817 aa20.12■□□□□ 0.81
CRIM1-203ENST00000426856 MYL6BP14649 208 aa20.12■□□□□ 0.81
CRIM1-203ENST00000426856 GPTP24298 496 aa20.12■□□□□ 0.81
CRIM1-203ENST00000426856 ALDH1B1P30837 517 aa20.12■□□□□ 0.81
CRIM1-203ENST00000426856 ZBTB3Q9H5J0 574 aa20.12■□□□□ 0.81
CRIM1-203ENST00000426856 CREBZFQ9NS37 354 aa20.12■□□□□ 0.81
CRIM1-203ENST00000426856 KIF6Q6ZMV9 814 aa20.11■□□□□ 0.81
CRIM1-203ENST00000426856 LDHDQ86WU2 507 aa20.11■□□□□ 0.81
CRIM1-203ENST00000426856 NYXQ9GZU5 481 aa20.11■□□□□ 0.81
CRIM1-203ENST00000426856 MKRN1Q9UHC7 482 aaKnown RBP20.11■□□□□ 0.81
CRIM1-203ENST00000426856 COL4A5P29400 1685 aa20.1■□□□□ 0.81
CRIM1-203ENST00000426856 PASKQ96RG2 1323 aa20.1■□□□□ 0.81
CRIM1-203ENST00000426856 IARSP41252 1262 aaKnown RBP20.1■□□□□ 0.81
CRIM1-203ENST00000426856 SLC51AQ86UW1 340 aa20.1■□□□□ 0.81
CRIM1-203ENST00000426856 SYNE4Q8N205 404 aa20.1■□□□□ 0.81
CRIM1-203ENST00000426856 ADAMTSL1Q8N6G6 1762 aa20.1■□□□□ 0.81
CRIM1-203ENST00000426856 RIC1Q4ADV7 1423 aa20.1■□□□□ 0.81
CRIM1-203ENST00000426856 IBTKQ9P2D0 1353 aaPredicted RBP20.09■□□□□ 0.81
CRIM1-203ENST00000426856 MAPK8IP3Q9UPT6 1336 aa20.09■□□□□ 0.81
CRIM1-203ENST00000426856 FZD9O00144 591 aa20.08■□□□□ 0.81
CRIM1-203ENST00000426856 EAPPQ56P03 285 aaPredicted RBP20.08■□□□□ 0.81
CRIM1-203ENST00000426856 SUSD4Q5VX71 490 aa20.08■□□□□ 0.81
CRIM1-203ENST00000426856 TNS4Q8IZW8 715 aa20.08■□□□□ 0.81
CRIM1-203ENST00000426856 HACL1Q9UJ83 578 aa20.08■□□□□ 0.81
CRIM1-203ENST00000426856 RNF123Q5XPI4 1314 aa20.07■□□□□ 0.8
CRIM1-203ENST00000426856 HOXA10P31260 410 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms