RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 KIF6Q6ZMV9 814 aa20.05■□□□□ 0.8
DDX55-203ENST00000421670 ADCY9O60503 1353 aa20.05■□□□□ 0.8
DDX55-203ENST00000421670 SOCS7O14512 581 aa20.04■□□□□ 0.8
DDX55-203ENST00000421670 ADRA2BP18089 450 aa20.04■□□□□ 0.8
DDX55-203ENST00000421670 SRP68Q9UHB9 627 aaKnown RBP20.04■□□□□ 0.8
DDX55-203ENST00000421670 RFC4P35249 363 aa20.04■□□□□ 0.8
DDX55-203ENST00000421670 COL23A1Q86Y22 540 aaPredicted RBP20.04■□□□□ 0.8
DDX55-203ENST00000421670 PTPRCP08575 1304 aa20.04■□□□□ 0.8
DDX55-203ENST00000421670 A0A087WZG4 1122 aa20.03■□□□□ 0.8
DDX55-203ENST00000421670 PI4KAP2A4QPH2 592 aa20.03■□□□□ 0.8
DDX55-203ENST00000421670 MSH5O43196 834 aa20.03■□□□□ 0.8
DDX55-203ENST00000421670 PLIN1O60240 522 aa20.03■□□□□ 0.8
DDX55-203ENST00000421670 PI4KAP1Q8N8J0 262 aa20.03■□□□□ 0.8
DDX55-203ENST00000421670 TNNQ9UQP3 1299 aa20.03■□□□□ 0.8
DDX55-203ENST00000421670 MAP3K15Q6ZN16 1313 aa20.03■□□□□ 0.8
DDX55-203ENST00000421670 USP42Q9H9J4 1324 aaKnown RBP20.02■□□□□ 0.8
DDX55-203ENST00000421670 F6X3S4 739 aa20.02■□□□□ 0.8
DDX55-203ENST00000421670 CAMTA2O94983 1202 aa20.02■□□□□ 0.8
DDX55-203ENST00000421670 DDX58O95786 925 aaKnown RBP20.02■□□□□ 0.8
DDX55-203ENST00000421670 ANKRD13DQ6ZTN6 518 aa20.02■□□□□ 0.8
DDX55-203ENST00000421670 R3HDM1Q15032 1099 aaKnown RBP20.01■□□□□ 0.79
DDX55-203ENST00000421670 USPL1Q5W0Q7 1092 aa20.01■□□□□ 0.79
DDX55-203ENST00000421670 RIC3Q7Z5B4 369 aa20.01■□□□□ 0.79
DDX55-203ENST00000421670 PLBD2Q8NHP8 589 aa20.01■□□□□ 0.79
DDX55-203ENST00000421670 PDGFDQ9GZP0 370 aaPredicted RBP20.01■□□□□ 0.79
DDX55-203ENST00000421670 NARFQ9UHQ1 456 aa20.01■□□□□ 0.79
DDX55-203ENST00000421670 MAP3K2Q9Y2U5 619 aa20.01■□□□□ 0.79
DDX55-203ENST00000421670 ZPR1O75312 459 aa20■□□□□ 0.79
DDX55-203ENST00000421670 TRIM27P14373 513 aa20■□□□□ 0.79
DDX55-203ENST00000421670 HLFQ16534 295 aa20■□□□□ 0.79
DDX55-203ENST00000421670 ZKSCAN2Q63HK3 967 aa20■□□□□ 0.79
DDX55-203ENST00000421670 KSR2Q6VAB6 950 aa20■□□□□ 0.79
DDX55-203ENST00000421670 FLAD1Q8NFF5 587 aa20■□□□□ 0.79
DDX55-203ENST00000421670 COL24A1Q17RW2 1714 aa20■□□□□ 0.79
DDX55-203ENST00000421670 RRP1P56182 461 aaKnown RBP20■□□□□ 0.79
DDX55-203ENST00000421670 ATF7IPQ6VMQ6 1270 aa20■□□□□ 0.79
DDX55-203ENST00000421670 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
DDX55-203ENST00000421670 PSDA5PKW4 1024 aaPredicted RBP19.99■□□□□ 0.79
DDX55-203ENST00000421670 IPO8O15397 1037 aaKnown RBP19.99■□□□□ 0.79
DDX55-203ENST00000421670 CLUAP1Q96AJ1 413 aa19.99■□□□□ 0.79
DDX55-203ENST00000421670 BCL2L12Q9HB09 334 aa19.99■□□□□ 0.79
DDX55-203ENST00000421670 PXDNLA1KZ92 1463 aa19.99■□□□□ 0.79
DDX55-203ENST00000421670 ERVV-1B6SEH8 477 aa19.98■□□□□ 0.79
DDX55-203ENST00000421670 DNAAF4Q8WXU2 420 aa19.98■□□□□ 0.79
DDX55-203ENST00000421670 ARHGAP45Q92619 1136 aa19.98■□□□□ 0.79
DDX55-203ENST00000421670 API5Q9BZZ5 524 aaKnown RBP19.98■□□□□ 0.79
DDX55-203ENST00000421670 GYS1P13807 737 aa19.97■□□□□ 0.79
DDX55-203ENST00000421670 SLC4A10Q6U841 1118 aa19.97■□□□□ 0.79
DDX55-203ENST00000421670 GIGYF2Q6Y7W6 1299 aaKnown RBP19.97■□□□□ 0.79
DDX55-203ENST00000421670 ABCC4O15439 1325 aa19.97■□□□□ 0.79
DDX55-203ENST00000421670 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.96■□□□□ 0.79
DDX55-203ENST00000421670 MYD88Q99836 296 aa19.96■□□□□ 0.79
DDX55-203ENST00000421670 FKBP8Q14318 412 aa19.95■□□□□ 0.78
DDX55-203ENST00000421670 METTL22Q9BUU2 404 aaPredicted RBP19.95■□□□□ 0.78
DDX55-203ENST00000421670 ATP10DQ9P241 1426 aa19.95■□□□□ 0.78
DDX55-203ENST00000421670 ZNF652Q9Y2D9 606 aa19.95■□□□□ 0.78
DDX55-203ENST00000421670 RNF123Q5XPI4 1314 aa19.95■□□□□ 0.78
DDX55-203ENST00000421670 RLBP1P12271 317 aa19.95■□□□□ 0.78
DDX55-203ENST00000421670 GPTP24298 496 aa19.95■□□□□ 0.78
DDX55-203ENST00000421670 C20orf194Q5TEA3 1177 aa19.95■□□□□ 0.78
DDX55-203ENST00000421670 MSL1Q68DK7 614 aa19.95■□□□□ 0.78
DDX55-203ENST00000421670 FTSJ3Q8IY81 847 aaKnown RBP19.95■□□□□ 0.78
DDX55-203ENST00000421670 ATP5J2-PTCD1G3V325 749 aa19.94■□□□□ 0.78
DDX55-203ENST00000421670 PANK1Q8TE04 598 aa19.94■□□□□ 0.78
DDX55-203ENST00000421670 CWF19L2Q2TBE0 894 aaKnown RBP19.93■□□□□ 0.78
DDX55-203ENST00000421670 TBC1D9BQ66K14 1250 aa19.93■□□□□ 0.78
DDX55-203ENST00000421670 CLEC4GQ6UXB4 293 aa19.93■□□□□ 0.78
DDX55-203ENST00000421670 BICDL1Q6ZP65 573 aa19.93■□□□□ 0.78
DDX55-203ENST00000421670 DZIP1LQ8IYY4 767 aaKnown RBP19.93■□□□□ 0.78
DDX55-203ENST00000421670 UBN2Q6ZU65 1347 aa19.93■□□□□ 0.78
DDX55-203ENST00000421670 IGKV5-2P06315 115 aa19.92■□□□□ 0.78
DDX55-203ENST00000421670 NEXNQ0ZGT2 675 aa19.92■□□□□ 0.78
DDX55-203ENST00000421670 TCIRG1Q13488 830 aa19.92■□□□□ 0.78
DDX55-203ENST00000421670 HSP90AB3PQ58FF7 597 aa19.91■□□□□ 0.78
DDX55-203ENST00000421670 BEND3Q5T5X7 828 aa19.91■□□□□ 0.78
DDX55-203ENST00000421670 TMEM57Q8N5G2 664 aa19.91■□□□□ 0.78
DDX55-203ENST00000421670 NIP7Q9Y221 180 aaKnown RBP eCLIP19.91■□□□□ 0.78
DDX55-203ENST00000421670 SRCAPQ6ZRS2 3230 aa19.91■□□□□ 0.78
DDX55-203ENST00000421670 RGL2O15211 777 aa19.91■□□□□ 0.78
DDX55-203ENST00000421670 ZNF34Q8IZ26 560 aa19.91■□□□□ 0.78
DDX55-203ENST00000421670 ISCA1Q9BUE6 129 aa19.91■□□□□ 0.78
DDX55-203ENST00000421670 NRXN2Q9P2S2 1712 aa19.9■□□□□ 0.78
DDX55-203ENST00000421670 LAMB2P55268 1798 aa19.9■□□□□ 0.78
DDX55-203ENST00000421670 NEURL1BA8MQ27 555 aa19.9■□□□□ 0.78
DDX55-203ENST00000421670 ZBTB7AO95365 584 aa19.9■□□□□ 0.78
DDX55-203ENST00000421670 NFIXQ14938 502 aa19.9■□□□□ 0.78
DDX55-203ENST00000421670 LINS1Q8NG48 757 aa19.9■□□□□ 0.78
DDX55-203ENST00000421670 SRCIN1Q9C0H9 1055 aa19.9■□□□□ 0.78
DDX55-203ENST00000421670 DDX60Q8IY21 1712 aaKnown RBP19.89■□□□□ 0.77
DDX55-203ENST00000421670 CARMIL3Q8ND23 1372 aa19.88■□□□□ 0.77
DDX55-203ENST00000421670 FAM177BA6PVY3 158 aa19.88■□□□□ 0.77
DDX55-203ENST00000421670 CCT4P50991 539 aaKnown RBP19.88■□□□□ 0.77
DDX55-203ENST00000421670 INTS3Q68E01 1043 aaKnown RBP19.88■□□□□ 0.77
DDX55-203ENST00000421670 NLRP10Q86W26 655 aa19.88■□□□□ 0.77
DDX55-203ENST00000421670 ITPRIPQ8IWB1 547 aa19.88■□□□□ 0.77
DDX55-203ENST00000421670 NLGN1Q8N2Q7 840 aa19.88■□□□□ 0.77
DDX55-203ENST00000421670 MYH3P11055 1940 aa19.88■□□□□ 0.77
DDX55-203ENST00000421670 MS4A1P11836 297 aa19.87■□□□□ 0.77
DDX55-203ENST00000421670 PDE3AQ14432 1141 aa19.87■□□□□ 0.77
DDX55-203ENST00000421670 SLC16A10Q8TF71 515 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms