RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 DDX54Q8TDD1 881 aaKnown RBP25.4■■□□□ 1.66
USP48-205ENST00000421625 ANKRD7Q92527 254 aa25.4■■□□□ 1.66
USP48-205ENST00000421625 RAB11FIP3O75154 756 aa25.4■■□□□ 1.66
USP48-205ENST00000421625 TPM3P06753 285 aa25.39■■□□□ 1.66
USP48-205ENST00000421625 PTH1RQ03431 593 aa25.39■■□□□ 1.65
USP48-205ENST00000421625 JAKMIP1Q96N16 626 aaKnown RBP25.39■■□□□ 1.65
USP48-205ENST00000421625 GOLGA6L6A8MZA4 724 aa25.38■■□□□ 1.65
USP48-205ENST00000421625 POLA2Q14181 598 aa25.38■■□□□ 1.65
USP48-205ENST00000421625 CAMK4Q16566 473 aa25.38■■□□□ 1.65
USP48-205ENST00000421625 PHAXQ9H814 394 aaKnown RBP25.38■■□□□ 1.65
USP48-205ENST00000421625 PDRG1Q9NUG6 133 aa25.38■■□□□ 1.65
USP48-205ENST00000421625 GTPBP4Q9BZE4 634 aaKnown RBP25.38■■□□□ 1.65
USP48-205ENST00000421625 CEP170BQ9Y4F5 1589 aaPredicted RBP25.38■■□□□ 1.65
USP48-205ENST00000421625 SRGAP3O43295 1099 aa25.37■■□□□ 1.65
USP48-205ENST00000421625 LUZP1Q86V48 1076 aa25.37■■□□□ 1.65
USP48-205ENST00000421625 NECAB1Q8N987 351 aa25.37■■□□□ 1.65
USP48-205ENST00000421625 EYA1Q99502 592 aa25.37■■□□□ 1.65
USP48-205ENST00000421625 CTIFO43310 598 aaKnown RBP25.37■■□□□ 1.65
USP48-205ENST00000421625 NALCNQ8IZF0 1738 aa25.37■■□□□ 1.65
USP48-205ENST00000421625 PRPF40BQ6NWY9 871 aaKnown RBP25.36■■□□□ 1.65
USP48-205ENST00000421625 TTC6Q86TZ1 520 aa25.36■■□□□ 1.65
USP48-205ENST00000421625 USP31Q70CQ4 1352 aa25.36■■□□□ 1.65
USP48-205ENST00000421625 FAM200AQ8TCP9 573 aa25.36■■□□□ 1.65
USP48-205ENST00000421625 KIF1BPQ96EK5 621 aa25.36■■□□□ 1.65
USP48-205ENST00000421625 MRVI1Q9Y6F6 885 aa25.36■■□□□ 1.65
USP48-205ENST00000421625 LIG1P18858 919 aa25.36■■□□□ 1.65
USP48-205ENST00000421625 FAM173BQ6P4H8 233 aa25.36■■□□□ 1.65
USP48-205ENST00000421625 USP6P35125 1406 aa25.35■■□□□ 1.65
USP48-205ENST00000421625 ME3Q16798 604 aa25.35■■□□□ 1.65
USP48-205ENST00000421625 FERMT3Q86UX7 667 aa25.35■■□□□ 1.65
USP48-205ENST00000421625 KDRP35968 1356 aa25.35■■□□□ 1.65
USP48-205ENST00000421625 LRMPQ12912 555 aa25.35■■□□□ 1.65
USP48-205ENST00000421625 N4BP2Q86UW6 1770 aaPredicted RBP25.34■■□□□ 1.65
USP48-205ENST00000421625 VPS53Q5VIR6 699 aa25.34■■□□□ 1.65
USP48-205ENST00000421625 PXDNLA1KZ92 1463 aa25.34■■□□□ 1.65
USP48-205ENST00000421625 TYRO3Q06418 890 aa25.34■■□□□ 1.65
USP48-205ENST00000421625 PLEKHG1Q9ULL1 1385 aa25.34■■□□□ 1.65
USP48-205ENST00000421625 TECPR2O15040 1411 aa25.34■■□□□ 1.65
USP48-205ENST00000421625 NBPF7P0C2Y1 421 aaPredicted RBP25.33■■□□□ 1.65
USP48-205ENST00000421625 MAP3K11Q16584 847 aa25.33■■□□□ 1.65
USP48-205ENST00000421625 KLHL34Q8N239 644 aa25.33■■□□□ 1.65
USP48-205ENST00000421625 NUP62CLQ9H1M0 184 aa25.33■■□□□ 1.65
USP48-205ENST00000421625 FMN2Q9NZ56 1722 aa25.33■■□□□ 1.65
USP48-205ENST00000421625 CCDC186Q7Z3E2 898 aa25.33■■□□□ 1.65
USP48-205ENST00000421625 CKAP2LQ8IYA6 745 aa25.33■■□□□ 1.65
USP48-205ENST00000421625 AMOTL2Q9Y2J4 779 aa25.33■■□□□ 1.65
USP48-205ENST00000421625 FER1L4A9Z1Z3 1794 aa25.33■■□□□ 1.64
USP48-205ENST00000421625 SIRT1Q96EB6 747 aa25.32■■□□□ 1.64
USP48-205ENST00000421625 NRBP1Q9UHY1 535 aa25.32■■□□□ 1.64
USP48-205ENST00000421625 CYP46A1Q9Y6A2 500 aa25.32■■□□□ 1.64
USP48-205ENST00000421625 CDC37L1Q7L3B6 337 aa25.32■■□□□ 1.64
USP48-205ENST00000421625 ZSWIM6Q9HCJ5 1215 aa25.32■■□□□ 1.64
USP48-205ENST00000421625 SH2B1Q9NRF2 756 aaPredicted RBP25.32■■□□□ 1.64
USP48-205ENST00000421625 IGSF1Q8N6C5 1336 aa25.32■■□□□ 1.64
USP48-205ENST00000421625 IGSF3O75054 1194 aa25.32■■□□□ 1.64
USP48-205ENST00000421625 NCBP1Q09161 790 aaKnown RBP25.32■■□□□ 1.64
USP48-205ENST00000421625 COL9A3Q14050 684 aaPredicted RBP25.32■■□□□ 1.64
USP48-205ENST00000421625 ZSCAN31Q96LW9 406 aaPredicted RBP25.32■■□□□ 1.64
USP48-205ENST00000421625 C16orf45Q96MC5 204 aaPredicted RBP25.32■■□□□ 1.64
USP48-205ENST00000421625 LRRC37A3O60309 1634 aa25.31■■□□□ 1.64
USP48-205ENST00000421625 GNAT3A8MTJ3 354 aa25.31■■□□□ 1.64
USP48-205ENST00000421625 HDGFL1Q5TGJ6 251 aa25.31■■□□□ 1.64
USP48-205ENST00000421625 PTPRUQ92729 1446 aa25.31■■□□□ 1.64
USP48-205ENST00000421625 THEMISQ8N1K5 641 aaPredicted RBP25.31■■□□□ 1.64
USP48-205ENST00000421625 IL17REQ8NFR9 667 aa25.31■■□□□ 1.64
USP48-205ENST00000421625 FLT4P35916 1363 aa25.3■■□□□ 1.64
USP48-205ENST00000421625 MAP3K5Q99683 1374 aa25.3■■□□□ 1.64
USP48-205ENST00000421625 LARP1BQ659C4 914 aaKnown RBP25.3■■□□□ 1.64
USP48-205ENST00000421625 CBX8Q9HC52 389 aa25.3■■□□□ 1.64
USP48-205ENST00000421625 TPCN1Q9ULQ1 816 aa25.3■■□□□ 1.64
USP48-205ENST00000421625 PLEKHG3A1L390 1219 aa25.3■■□□□ 1.64
USP48-205ENST00000421625 KRT85P78386 507 aa25.3■■□□□ 1.64
USP48-205ENST00000421625 ANO6Q4KMQ2 910 aa25.3■■□□□ 1.64
USP48-205ENST00000421625 CACNA1FO60840 1977 aa25.3■■□□□ 1.64
USP48-205ENST00000421625 CRYBG1Q9Y4K1 1723 aa25.3■■□□□ 1.64
USP48-205ENST00000421625 AMPHP49418 695 aa25.29■■□□□ 1.64
USP48-205ENST00000421625 DRC7Q8IY82 874 aa25.29■■□□□ 1.64
USP48-205ENST00000421625 SBNO1A3KN83 1393 aa25.29■■□□□ 1.64
USP48-205ENST00000421625 DACT1Q9NYF0 836 aa25.28■■□□□ 1.64
USP48-205ENST00000421625 HTATSF1O43719 755 aaKnown RBP25.27■■□□□ 1.64
USP48-205ENST00000421625 GLRX3O76003 335 aaKnown RBP25.27■■□□□ 1.64
USP48-205ENST00000421625 TNMDQ9H2S6 317 aa25.27■■□□□ 1.64
USP48-205ENST00000421625 RUFY2Q8WXA3 655 aa25.27■■□□□ 1.64
USP48-205ENST00000421625 TM6SF1Q9BZW5 370 aa25.27■■□□□ 1.64
USP48-205ENST00000421625 KIF20AO95235 890 aa25.27■■□□□ 1.64
USP48-205ENST00000421625 OS9Q13438 667 aaPredicted RBP25.27■■□□□ 1.64
USP48-205ENST00000421625 NAA30Q147X3 362 aaPredicted RBP25.27■■□□□ 1.64
USP48-205ENST00000421625 TOPAZ1Q8N9V7 1692 aa25.26■■□□□ 1.63
USP48-205ENST00000421625 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.26■■□□□ 1.63
USP48-205ENST00000421625 USP42Q9H9J4 1324 aaKnown RBP25.26■■□□□ 1.63
USP48-205ENST00000421625 NECTIN1Q15223 517 aa25.26■■□□□ 1.63
USP48-205ENST00000421625 TFIP11Q9UBB9 837 aaKnown RBP25.26■■□□□ 1.63
USP48-205ENST00000421625 EIF2S2P20042 333 aaKnown RBP25.25■■□□□ 1.63
USP48-205ENST00000421625 TAF7Q15545 349 aaPredicted RBP25.25■■□□□ 1.63
USP48-205ENST00000421625 KCNB2Q92953 911 aa25.25■■□□□ 1.63
USP48-205ENST00000421625 TRIM5Q9C035 493 aa25.25■■□□□ 1.63
USP48-205ENST00000421625 TTC41PQ6P2S7 1318 aa25.25■■□□□ 1.63
USP48-205ENST00000421625 ZSCAN25Q6NSZ9 544 aa25.25■■□□□ 1.63
USP48-205ENST00000421625 TCEANC2Q96MN5 208 aa25.25■■□□□ 1.63
USP48-205ENST00000421625 ELP1O95163 1332 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms