RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 SSH1Q8WYL5 1049 aa39.24■■■■□ 3.87
CSNK1E-206ENST00000413574 ATF5Q9Y2D1 282 aaPredicted RBP39.24■■■■□ 3.87
CSNK1E-206ENST00000413574 ZBTB3Q9H5J0 574 aa39.23■■■■□ 3.87
CSNK1E-206ENST00000413574 FKBP8Q14318 412 aa39.22■■■■□ 3.87
CSNK1E-206ENST00000413574 KIF6Q6ZMV9 814 aa39.22■■■■□ 3.87
CSNK1E-206ENST00000413574 NUP98P52948 1817 aa39.21■■■■□ 3.87
CSNK1E-206ENST00000413574 HLFQ16534 295 aa39.21■■■■□ 3.87
CSNK1E-206ENST00000413574 MAP3K15Q6ZN16 1313 aa39.2■■■■□ 3.87
CSNK1E-206ENST00000413574 ZNF428Q96B54 188 aa39.2■■■■□ 3.87
CSNK1E-206ENST00000413574 MTFR1LQ9H019 292 aa39.2■■■■□ 3.87
CSNK1E-206ENST00000413574 MRPL50Q8N5N7 158 aaKnown RBP39.18■■■■□ 3.86
CSNK1E-206ENST00000413574 SRCAPQ6ZRS2 3230 aa39.18■■■■□ 3.86
CSNK1E-206ENST00000413574 RARSP54136 660 aaKnown RBP39.18■■■■□ 3.86
CSNK1E-206ENST00000413574 ALDH1L2Q3SY69 923 aa39.17■■■■□ 3.86
CSNK1E-206ENST00000413574 FLIIQ13045 1269 aa39.16■■■■□ 3.86
CSNK1E-206ENST00000413574 SMC4Q9NTJ3 1288 aa39.16■■■■□ 3.86
CSNK1E-206ENST00000413574 COL24A1Q17RW2 1714 aa39.16■■■■□ 3.86
CSNK1E-206ENST00000413574 ARFGEF2Q9Y6D5 1785 aa39.15■■■■□ 3.86
CSNK1E-206ENST00000413574 ERVV-1B6SEH8 477 aa39.14■■■■□ 3.86
CSNK1E-206ENST00000413574 ANKRD13DQ6ZTN6 518 aa39.14■■■■□ 3.86
CSNK1E-206ENST00000413574 NLGN1Q8N2Q7 840 aa39.14■■■■□ 3.86
CSNK1E-206ENST00000413574 TBC1D9BQ66K14 1250 aa39.13■■■■□ 3.85
CSNK1E-206ENST00000413574 BICDL1Q6ZP65 573 aa39.12■■■■□ 3.85
CSNK1E-206ENST00000413574 PLBD2Q8NHP8 589 aa39.12■■■■□ 3.85
CSNK1E-206ENST00000413574 ZNF652Q9Y2D9 606 aa39.11■■■■□ 3.85
CSNK1E-206ENST00000413574 BCAR3O75815 825 aa39.1■■■■□ 3.85
CSNK1E-206ENST00000413574 FKBP5Q13451 457 aaPredicted RBP39.1■■■■□ 3.85
CSNK1E-206ENST00000413574 CLEC4GQ6UXB4 293 aa39.1■■■■□ 3.85
CSNK1E-206ENST00000413574 GIGYF2Q6Y7W6 1299 aaKnown RBP39.1■■■■□ 3.85
CSNK1E-206ENST00000413574 RIC3Q7Z5B4 369 aa39.1■■■■□ 3.85
CSNK1E-206ENST00000413574 NFIXQ14938 502 aa39.09■■■■□ 3.85
CSNK1E-206ENST00000413574 SPON1Q9HCB6 807 aa39.09■■■■□ 3.85
CSNK1E-206ENST00000413574 PI4KAP2A4QPH2 592 aa39.08■■■■□ 3.85
CSNK1E-206ENST00000413574 MMP10P09238 476 aa39.08■■■■□ 3.85
CSNK1E-206ENST00000413574 PTGER2P43116 358 aa39.08■■■■□ 3.85
CSNK1E-206ENST00000413574 PI4KAP1Q8N8J0 262 aa39.08■■■■□ 3.85
CSNK1E-206ENST00000413574 ADCY9O60503 1353 aa39.08■■■■□ 3.85
CSNK1E-206ENST00000413574 ANKRD36CQ5JPF3 1778 aa39.07■■■■□ 3.85
CSNK1E-206ENST00000413574 TM4SF1P30408 202 aa39.07■■■■□ 3.85
CSNK1E-206ENST00000413574 SGIP1Q9BQI5 828 aa39.07■■■■□ 3.85
CSNK1E-206ENST00000413574 DDX58O95786 925 aaKnown RBP39.07■■■■□ 3.84
CSNK1E-206ENST00000413574 MAP3K2Q9Y2U5 619 aa39.06■■■■□ 3.84
CSNK1E-206ENST00000413574 GPTP24298 496 aa39.05■■■■□ 3.84
CSNK1E-206ENST00000413574 DDR1Q08345 913 aa39.05■■■■□ 3.84
CSNK1E-206ENST00000413574 KSR2Q6VAB6 950 aa39.05■■■■□ 3.84
CSNK1E-206ENST00000413574 NIP7Q9Y221 180 aaKnown RBP eCLIP39.04■■■■□ 3.84
CSNK1E-206ENST00000413574 RGL2O15211 777 aa39.03■■■■□ 3.84
CSNK1E-206ENST00000413574 NOB1Q9ULX3 412 aaKnown RBP39.03■■■■□ 3.84
CSNK1E-206ENST00000413574 F6X3S4 739 aa39.02■■■■□ 3.84
CSNK1E-206ENST00000413574 AFDNP55196 1824 aaKnown RBP39.01■■■■□ 3.84
CSNK1E-206ENST00000413574 ATP10DQ9P241 1426 aa39.01■■■■□ 3.84
CSNK1E-206ENST00000413574 POLD1P28340 1107 aa39.01■■■■□ 3.84
CSNK1E-206ENST00000413574 TCIRG1Q13488 830 aa39.01■■■■□ 3.84
CSNK1E-206ENST00000413574 SETDB2Q96T68 719 aa39.01■■■■□ 3.84
CSNK1E-206ENST00000413574 POLRMTO00411 1230 aaKnown RBP39■■■■□ 3.83
CSNK1E-206ENST00000413574 BRPF1P55201 1214 aaPredicted RBP39■■■■□ 3.83
CSNK1E-206ENST00000413574 ZNF34Q8IZ26 560 aa39■■■■□ 3.83
CSNK1E-206ENST00000413574 UBN2Q6ZU65 1347 aa39■■■■□ 3.83
CSNK1E-206ENST00000413574 ATP5J2-PTCD1G3V325 749 aa39■■■■□ 3.83
CSNK1E-206ENST00000413574 MYD88Q99836 296 aa38.99■■■■□ 3.83
CSNK1E-206ENST00000413574 RCAN3Q9UKA8 241 aa38.99■■■■□ 3.83
CSNK1E-206ENST00000413574 PARP3Q9Y6F1 533 aa38.99■■■■□ 3.83
CSNK1E-206ENST00000413574 METTL22Q9BUU2 404 aaPredicted RBP38.98■■■■□ 3.83
CSNK1E-206ENST00000413574 FAM177BA6PVY3 158 aa38.97■■■■□ 3.83
CSNK1E-206ENST00000413574 HSP90AB3PQ58FF7 597 aa38.97■■■■□ 3.83
CSNK1E-206ENST00000413574 PTPRCP08575 1304 aa38.97■■■■□ 3.83
CSNK1E-206ENST00000413574 DNAAF4Q8WXU2 420 aa38.96■■■■□ 3.83
CSNK1E-206ENST00000413574 CARMIL3Q8ND23 1372 aa38.96■■■■□ 3.83
CSNK1E-206ENST00000413574 FRAT1Q92837 279 aaPredicted RBP38.96■■■■□ 3.83
CSNK1E-206ENST00000413574 SERPINB2P05120 415 aa38.95■■■■□ 3.83
CSNK1E-206ENST00000413574 ISCA1Q9BUE6 129 aa38.94■■■■□ 3.82
CSNK1E-206ENST00000413574 KIF16BQ96L93 1317 aa38.94■■■■□ 3.82
CSNK1E-206ENST00000413574 NRXN2Q9P2S2 1712 aa38.93■■■■□ 3.82
CSNK1E-206ENST00000413574 SUSD4Q5VX71 490 aa38.92■■■■□ 3.82
CSNK1E-206ENST00000413574 NLRP10Q86W26 655 aa38.92■■■■□ 3.82
CSNK1E-206ENST00000413574 IGKV5-2P06315 115 aa38.91■■■■□ 3.82
CSNK1E-206ENST00000413574 SLC4A10Q6U841 1118 aa38.91■■■■□ 3.82
CSNK1E-206ENST00000413574 LRP5O75197 1615 aa38.91■■■■□ 3.82
CSNK1E-206ENST00000413574 CCDC24Q8N4L8 307 aa38.9■■■■□ 3.82
CSNK1E-206ENST00000413574 CWF19L2Q2TBE0 894 aaKnown RBP38.89■■■■□ 3.82
CSNK1E-206ENST00000413574 NBPF5PQ86XG9 351 aaPredicted RBP38.89■■■■□ 3.82
CSNK1E-206ENST00000413574 TNNQ9UQP3 1299 aa38.89■■■■□ 3.82
CSNK1E-206ENST00000413574 NEXNQ0ZGT2 675 aa38.89■■■■□ 3.82
CSNK1E-206ENST00000413574 PARP10Q53GL7 1025 aa38.88■■■■□ 3.81
CSNK1E-206ENST00000413574 PRR5LQ6MZQ0 368 aa38.86■■■■□ 3.81
CSNK1E-206ENST00000413574 TRIM28Q13263 835 aaKnown RBP38.85■■■■□ 3.81
CSNK1E-206ENST00000413574 BEND3Q5T5X7 828 aa38.85■■■■□ 3.81
CSNK1E-206ENST00000413574 NUTM1Q86Y26 1132 aa38.85■■■■□ 3.81
CSNK1E-206ENST00000413574 ARHGAP45Q92619 1136 aa38.85■■■■□ 3.81
CSNK1E-206ENST00000413574 PPP1R1BQ9UD71 204 aaPredicted RBP38.85■■■■□ 3.81
CSNK1E-206ENST00000413574 NTSR2O95665 410 aa38.85■■■■□ 3.81
CSNK1E-206ENST00000413574 CNBD1Q8NA66 436 aa38.85■■■■□ 3.81
CSNK1E-206ENST00000413574 API5Q9BZZ5 524 aaKnown RBP38.85■■■■□ 3.81
CSNK1E-206ENST00000413574 NEURL1BA8MQ27 555 aa38.84■■■■□ 3.81
CSNK1E-206ENST00000413574 NPHP1O15259 732 aa38.84■■■■□ 3.81
CSNK1E-206ENST00000413574 IPO8O15397 1037 aaKnown RBP38.84■■■■□ 3.81
CSNK1E-206ENST00000413574 TRIM27P14373 513 aa38.84■■■■□ 3.81
CSNK1E-206ENST00000413574 PPP1R42Q7Z4L9 355 aa38.84■■■■□ 3.81
CSNK1E-206ENST00000413574 KLHL34Q8N239 644 aa38.84■■■■□ 3.81
CSNK1E-206ENST00000413574 ATF7IPQ6VMQ6 1270 aa38.83■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms