RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 CREBZFQ9NS37 354 aa22.81■■□□□ 1.24
SCRN1-203ENST00000409570 PRPF40BQ6NWY9 871 aaKnown RBP22.8■■□□□ 1.24
SCRN1-203ENST00000409570 FMNL2Q96PY5 1086 aa22.8■■□□□ 1.24
SCRN1-203ENST00000409570 CEMIPQ8WUJ3 1361 aa22.79■■□□□ 1.24
SCRN1-203ENST00000409570 U2SURPO15042 1029 aaKnown RBP22.79■■□□□ 1.24
SCRN1-203ENST00000409570 KCNQ3O43525 872 aa22.79■■□□□ 1.24
SCRN1-203ENST00000409570 ST5P78524 1137 aa22.78■■□□□ 1.24
SCRN1-203ENST00000409570 MASTLQ96GX5 879 aa22.78■■□□□ 1.24
SCRN1-203ENST00000409570 MKRN1Q9UHC7 482 aaKnown RBP22.78■■□□□ 1.24
SCRN1-203ENST00000409570 NPHP1O15259 732 aa22.77■■□□□ 1.24
SCRN1-203ENST00000409570 DZIP3Q86Y13 1208 aaKnown RBP22.77■■□□□ 1.24
SCRN1-203ENST00000409570 SOGA3Q5TF21 947 aa22.76■■□□□ 1.23
SCRN1-203ENST00000409570 NPM2Q86SE8 214 aaKnown RBP22.76■■□□□ 1.23
SCRN1-203ENST00000409570 C7orf43Q8WVR3 580 aa22.75■■□□□ 1.23
SCRN1-203ENST00000409570 USP16Q9Y5T5 823 aa22.75■■□□□ 1.23
SCRN1-203ENST00000409570 NPC1L1Q9UHC9 1359 aa22.75■■□□□ 1.23
SCRN1-203ENST00000409570 PIP4K2AP48426 406 aaPredicted RBP22.74■■□□□ 1.23
SCRN1-203ENST00000409570 PASKQ96RG2 1323 aa22.74■■□□□ 1.23
SCRN1-203ENST00000409570 CNTNAP1P78357 1384 aa22.74■■□□□ 1.23
SCRN1-203ENST00000409570 BTBD11A6QL63 1104 aa22.73■■□□□ 1.23
SCRN1-203ENST00000409570 L3MBTL3Q96JM7 780 aaPredicted RBP22.73■■□□□ 1.23
SCRN1-203ENST00000409570 PHACTR3Q96KR7 559 aa22.73■■□□□ 1.23
SCRN1-203ENST00000409570 ADAMTSL1Q8N6G6 1762 aa22.72■■□□□ 1.23
SCRN1-203ENST00000409570 PRAMEF22A3QJZ6 481 aa22.72■■□□□ 1.23
SCRN1-203ENST00000409570 IQCA1LA6NCM1 817 aa22.72■■□□□ 1.23
SCRN1-203ENST00000409570 LDHDQ86WU2 507 aa22.72■■□□□ 1.23
SCRN1-203ENST00000409570 TAF1DQ9H5J8 278 aaPredicted RBP22.72■■□□□ 1.23
SCRN1-203ENST00000409570 CCDC93Q567U6 631 aa22.71■■□□□ 1.23
SCRN1-203ENST00000409570 CLEC4GQ6UXB4 293 aa22.71■■□□□ 1.23
SCRN1-203ENST00000409570 NBPF5PQ86XG9 351 aaPredicted RBP22.71■■□□□ 1.23
SCRN1-203ENST00000409570 FOXN1O15353 648 aa22.7■■□□□ 1.22
SCRN1-203ENST00000409570 CNGB1Q14028 1251 aaPredicted RBP22.7■■□□□ 1.22
SCRN1-203ENST00000409570 ZNF541Q9H0D2 1346 aa22.69■■□□□ 1.22
SCRN1-203ENST00000409570 KLRG2A4D1S0 409 aaPredicted RBP22.69■■□□□ 1.22
SCRN1-203ENST00000409570 NPR1P16066 1061 aa22.69■■□□□ 1.22
SCRN1-203ENST00000409570 PRKAR2BP31323 418 aa22.69■■□□□ 1.22
SCRN1-203ENST00000409570 CCER1Q8TC90 406 aaPredicted RBP22.69■■□□□ 1.22
SCRN1-203ENST00000409570 RSPH6AQ9H0K4 717 aa22.69■■□□□ 1.22
SCRN1-203ENST00000409570 ITGBL1O95965 494 aaPredicted RBP22.68■■□□□ 1.22
SCRN1-203ENST00000409570 FKBP4Q02790 459 aaKnown RBP eCLIP22.68■■□□□ 1.22
SCRN1-203ENST00000409570 OLFM4Q6UX06 510 aa22.67■■□□□ 1.22
SCRN1-203ENST00000409570 ZNF277Q9NRM2 450 aaPredicted RBP22.67■■□□□ 1.22
SCRN1-203ENST00000409570 ZNF652Q9Y2D9 606 aa22.67■■□□□ 1.22
SCRN1-203ENST00000409570 SNRPA1P09661 255 aaKnown RBP22.66■■□□□ 1.22
SCRN1-203ENST00000409570 TMEM88BA6NKF7 163 aa22.65■■□□□ 1.22
SCRN1-203ENST00000409570 NBPF26B4DH59 902 aa22.65■■□□□ 1.22
SCRN1-203ENST00000409570 VEGFBP49765 207 aa22.65■■□□□ 1.22
SCRN1-203ENST00000409570 NBPF10Q6P3W6 841 aaKnown RBP22.65■■□□□ 1.22
SCRN1-203ENST00000409570 TPTE2Q6XPS3 522 aa22.65■■□□□ 1.22
SCRN1-203ENST00000409570 NBPF15Q8N660 670 aa22.65■■□□□ 1.22
SCRN1-203ENST00000409570 PRDM10Q9NQV6 1147 aa22.65■■□□□ 1.22
SCRN1-203ENST00000409570 NIP7Q9Y221 180 aaKnown RBP eCLIP22.65■■□□□ 1.22
SCRN1-203ENST00000409570 NUP98P52948 1817 aa22.65■■□□□ 1.22
SCRN1-203ENST00000409570 LAMB4A4D0S4 1761 aa22.65■■□□□ 1.22
SCRN1-203ENST00000409570 RGL2O15211 777 aa22.64■■□□□ 1.21
SCRN1-203ENST00000409570 EAPPQ56P03 285 aaPredicted RBP22.64■■□□□ 1.21
SCRN1-203ENST00000409570 HACL1Q9UJ83 578 aa22.64■■□□□ 1.21
SCRN1-203ENST00000409570 MCM10Q7L590 875 aa22.63■■□□□ 1.21
SCRN1-203ENST00000409570 RTKN2Q8IZC4 609 aa22.63■■□□□ 1.21
SCRN1-203ENST00000409570 FAM177BA6PVY3 158 aa22.62■■□□□ 1.21
SCRN1-203ENST00000409570 EPHX2P34913 555 aa22.62■■□□□ 1.21
SCRN1-203ENST00000409570 SNED1Q8TER0 1413 aa22.62■■□□□ 1.21
SCRN1-203ENST00000409570 FZD9O00144 591 aa22.61■■□□□ 1.21
SCRN1-203ENST00000409570 IARSP41252 1262 aaKnown RBP22.61■■□□□ 1.21
SCRN1-203ENST00000409570 CTCFP49711 727 aaPredicted RBP22.61■■□□□ 1.21
SCRN1-203ENST00000409570 HLFQ16534 295 aa22.61■■□□□ 1.21
SCRN1-203ENST00000409570 CLEC11AQ9Y240 323 aa22.61■■□□□ 1.21
SCRN1-203ENST00000409570 DLG5Q8TDM6 1919 aa22.61■■□□□ 1.21
SCRN1-203ENST00000409570 RNF123Q5XPI4 1314 aa22.6■■□□□ 1.21
SCRN1-203ENST00000409570 DCTN1Q14203 1278 aa22.6■■□□□ 1.21
SCRN1-203ENST00000409570 SYNE4Q8N205 404 aa22.6■■□□□ 1.21
SCRN1-203ENST00000409570 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
SCRN1-203ENST00000409570 AIDAQ96BJ3 306 aa22.6■■□□□ 1.21
SCRN1-203ENST00000409570 CFAP53Q96M91 514 aa22.6■■□□□ 1.21
SCRN1-203ENST00000409570 WBP1LQ9NX94 342 aa22.6■■□□□ 1.21
SCRN1-203ENST00000409570 ALDH1B1P30837 517 aa22.59■■□□□ 1.21
SCRN1-203ENST00000409570 LTBP1Q14766 1721 aa22.59■■□□□ 1.21
SCRN1-203ENST00000409570 MAP1SQ66K74 1059 aaPredicted RBP22.58■■□□□ 1.21
SCRN1-203ENST00000409570 PNMA8AQ86V59 439 aaPredicted RBP22.58■■□□□ 1.21
SCRN1-203ENST00000409570 CNTROBQ8N137 903 aa22.58■■□□□ 1.21
SCRN1-203ENST00000409570 NUDCQ9Y266 331 aa22.58■■□□□ 1.21
SCRN1-203ENST00000409570 COL4A5P29400 1685 aa22.58■■□□□ 1.2
SCRN1-203ENST00000409570 TRPM7Q96QT4 1865 aa22.58■■□□□ 1.2
SCRN1-203ENST00000409570 RASSF10A6NK89 507 aa22.57■■□□□ 1.2
SCRN1-203ENST00000409570 GPC2Q8N158 579 aa22.57■■□□□ 1.2
SCRN1-203ENST00000409570 KDM3BQ7LBC6 1761 aa22.57■■□□□ 1.2
SCRN1-203ENST00000409570 ABCC12Q96J65 1359 aa22.56■■□□□ 1.2
SCRN1-203ENST00000409570 U2AF1L5P0DN76 240 aaPredicted RBP22.56■■□□□ 1.2
SCRN1-203ENST00000409570 LBX1P52954 281 aa22.56■■□□□ 1.2
SCRN1-203ENST00000409570 U2AF1Q01081 240 aaKnown RBP eCLIP22.56■■□□□ 1.2
SCRN1-203ENST00000409570 DEFB115Q30KQ5 88 aa22.56■■□□□ 1.2
SCRN1-203ENST00000409570 PSMD1Q99460 953 aa22.56■■□□□ 1.2
SCRN1-203ENST00000409570 HTATSF1O43719 755 aaKnown RBP22.55■■□□□ 1.2
SCRN1-203ENST00000409570 GTF2E1P29083 439 aaPredicted RBP22.55■■□□□ 1.2
SCRN1-203ENST00000409570 CRY2Q49AN0 593 aa22.55■■□□□ 1.2
SCRN1-203ENST00000409570 TAF7Q15545 349 aaPredicted RBP22.53■■□□□ 1.2
SCRN1-203ENST00000409570 NUTM1Q86Y26 1132 aa22.53■■□□□ 1.2
SCRN1-203ENST00000409570 JDP2Q8WYK2 163 aa22.53■■□□□ 1.2
SCRN1-203ENST00000409570 MIS18AQ9NYP9 233 aa22.53■■□□□ 1.2
SCRN1-203ENST00000409570 HSPA8P11142 646 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms