RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 C10orf71Q711Q0 1435 aa20.58■□□□□ 0.89
GDPD3-202ENST00000406256 EXOSC9Q06265 439 aaKnown RBP20.58■□□□□ 0.88
GDPD3-202ENST00000406256 HLFQ16534 295 aa20.58■□□□□ 0.88
GDPD3-202ENST00000406256 TBC1D9BQ66K14 1250 aa20.58■□□□□ 0.88
GDPD3-202ENST00000406256 CDCA7LQ96GN5 454 aa20.58■□□□□ 0.88
GDPD3-202ENST00000406256 PPP1R1BQ9UD71 204 aaPredicted RBP20.58■□□□□ 0.88
GDPD3-202ENST00000406256 BRCA1P38398 1863 aaKnown RBP20.57■□□□□ 0.88
GDPD3-202ENST00000406256 RGL2O15211 777 aa20.57■□□□□ 0.88
GDPD3-202ENST00000406256 SLFN5Q08AF3 891 aa20.57■□□□□ 0.88
GDPD3-202ENST00000406256 TRMT2AQ8IZ69 625 aaKnown RBP20.57■□□□□ 0.88
GDPD3-202ENST00000406256 SYT17Q9BSW7 474 aa20.57■□□□□ 0.88
GDPD3-202ENST00000406256 N4BP2Q86UW6 1770 aaPredicted RBP20.56■□□□□ 0.88
GDPD3-202ENST00000406256 MAP3K15Q6ZN16 1313 aa20.56■□□□□ 0.88
GDPD3-202ENST00000406256 GOLGA2Q08379 1002 aa20.56■□□□□ 0.88
GDPD3-202ENST00000406256 TWISTNBQ3B726 338 aaPredicted RBP20.56■□□□□ 0.88
GDPD3-202ENST00000406256 VAMP4O75379 141 aa20.55■□□□□ 0.88
GDPD3-202ENST00000406256 MYH16Q9H6N6 1097 aa20.55■□□□□ 0.88
GDPD3-202ENST00000406256 DBF4Q9UBU7 674 aaPredicted RBP20.55■□□□□ 0.88
GDPD3-202ENST00000406256 ATP10DQ9P241 1426 aa20.54■□□□□ 0.88
GDPD3-202ENST00000406256 CLEC4GQ6UXB4 293 aa20.54■□□□□ 0.88
GDPD3-202ENST00000406256 XAGE3Q8WTP9 111 aa20.54■□□□□ 0.88
GDPD3-202ENST00000406256 ERVV-1B6SEH8 477 aa20.53■□□□□ 0.88
GDPD3-202ENST00000406256 COPS6Q7L5N1 327 aa20.53■□□□□ 0.88
GDPD3-202ENST00000406256 NLGN2Q8NFZ4 835 aa20.53■□□□□ 0.88
GDPD3-202ENST00000406256 CARMIL3Q8ND23 1372 aa20.52■□□□□ 0.88
GDPD3-202ENST00000406256 DLEC1Q9Y238 1755 aa20.52■□□□□ 0.88
GDPD3-202ENST00000406256 E9PSI1 815 aa20.52■□□□□ 0.88
GDPD3-202ENST00000406256 NPM2Q86SE8 214 aaKnown RBP20.52■□□□□ 0.88
GDPD3-202ENST00000406256 ZBTB3Q9H5J0 574 aa20.52■□□□□ 0.88
GDPD3-202ENST00000406256 PHAXQ9H814 394 aaKnown RBP20.52■□□□□ 0.88
GDPD3-202ENST00000406256 PARP3Q9Y6F1 533 aa20.52■□□□□ 0.88
GDPD3-202ENST00000406256 COL11A2P13942 1736 aaPredicted RBP20.51■□□□□ 0.87
GDPD3-202ENST00000406256 PXDNLA1KZ92 1463 aa20.51■□□□□ 0.87
GDPD3-202ENST00000406256 BICDL1Q6ZP65 573 aa20.51■□□□□ 0.87
GDPD3-202ENST00000406256 CD2APQ9Y5K6 639 aa20.51■□□□□ 0.87
GDPD3-202ENST00000406256 SERPINB2P05120 415 aa20.5■□□□□ 0.87
GDPD3-202ENST00000406256 HNRNPUQ00839 825 aaKnown RBP eCLIP20.5■□□□□ 0.87
GDPD3-202ENST00000406256 CCDC30Q5VVM6 783 aa20.5■□□□□ 0.87
GDPD3-202ENST00000406256 GIGYF2Q6Y7W6 1299 aaKnown RBP20.5■□□□□ 0.87
GDPD3-202ENST00000406256 HYPKQ9NX55 129 aa20.5■□□□□ 0.87
GDPD3-202ENST00000406256 UBN2Q6ZU65 1347 aa20.5■□□□□ 0.87
GDPD3-202ENST00000406256 TCERG1O14776 1098 aaKnown RBP20.49■□□□□ 0.87
GDPD3-202ENST00000406256 KIF6Q6ZMV9 814 aa20.49■□□□□ 0.87
GDPD3-202ENST00000406256 AIMP1Q12904 312 aaKnown RBP20.48■□□□□ 0.87
GDPD3-202ENST00000406256 ZNF34Q8IZ26 560 aa20.48■□□□□ 0.87
GDPD3-202ENST00000406256 ZNF652Q9Y2D9 606 aa20.48■□□□□ 0.87
GDPD3-202ENST00000406256 TNRC6CQ9HCJ0 1690 aaKnown RBP20.48■□□□□ 0.87
GDPD3-202ENST00000406256 G2E3Q7L622 706 aa20.47■□□□□ 0.87
GDPD3-202ENST00000406256 KLHL34Q8N239 644 aa20.47■□□□□ 0.87
GDPD3-202ENST00000406256 PRR5LQ6MZQ0 368 aa20.46■□□□□ 0.87
GDPD3-202ENST00000406256 NIP7Q9Y221 180 aaKnown RBP eCLIP20.46■□□□□ 0.87
GDPD3-202ENST00000406256 PLBD2Q8NHP8 589 aa20.46■□□□□ 0.87
GDPD3-202ENST00000406256 SETDB2Q96T68 719 aa20.46■□□□□ 0.87
GDPD3-202ENST00000406256 ZBED9Q6R2W3 1325 aa20.45■□□□□ 0.86
GDPD3-202ENST00000406256 LAMB2P55268 1798 aa20.45■□□□□ 0.86
GDPD3-202ENST00000406256 IBTKQ9P2D0 1353 aaPredicted RBP20.45■□□□□ 0.86
GDPD3-202ENST00000406256 ANKRD13DQ6ZTN6 518 aa20.45■□□□□ 0.86
GDPD3-202ENST00000406256 ADCY9O60503 1353 aa20.44■□□□□ 0.86
GDPD3-202ENST00000406256 GPTP24298 496 aa20.44■□□□□ 0.86
GDPD3-202ENST00000406256 CCDC24Q8N4L8 307 aa20.44■□□□□ 0.86
GDPD3-202ENST00000406256 CHMP4AQ9BY43 222 aa20.44■□□□□ 0.86
GDPD3-202ENST00000406256 DDX60Q8IY21 1712 aaKnown RBP20.43■□□□□ 0.86
GDPD3-202ENST00000406256 SLC4A2P04920 1241 aa20.43■□□□□ 0.86
GDPD3-202ENST00000406256 KCNA3P22001 575 aa20.43■□□□□ 0.86
GDPD3-202ENST00000406256 TCIRG1Q13488 830 aa20.43■□□□□ 0.86
GDPD3-202ENST00000406256 ARFGEF1Q9Y6D6 1849 aa20.43■□□□□ 0.86
GDPD3-202ENST00000406256 ABCC12Q96J65 1359 aa20.42■□□□□ 0.86
GDPD3-202ENST00000406256 NTSR2O95665 410 aa20.42■□□□□ 0.86
GDPD3-202ENST00000406256 ISCA1Q9BUE6 129 aa20.42■□□□□ 0.86
GDPD3-202ENST00000406256 STK31Q9BXU1 1019 aa20.42■□□□□ 0.86
GDPD3-202ENST00000406256 CACNA1SQ13698 1873 aa20.41■□□□□ 0.86
GDPD3-202ENST00000406256 TGFB2P61812 414 aa20.41■□□□□ 0.86
GDPD3-202ENST00000406256 SUSD4Q5VX71 490 aa20.41■□□□□ 0.86
GDPD3-202ENST00000406256 CNBD1Q8NA66 436 aa20.41■□□□□ 0.86
GDPD3-202ENST00000406256 RIC1Q4ADV7 1423 aa20.4■□□□□ 0.86
GDPD3-202ENST00000406256 DPEP1P16444 411 aa20.4■□□□□ 0.86
GDPD3-202ENST00000406256 FLIIQ13045 1269 aa20.4■□□□□ 0.86
GDPD3-202ENST00000406256 NLRP10Q86W26 655 aa20.4■□□□□ 0.86
GDPD3-202ENST00000406256 NBPF5PQ86XG9 351 aaPredicted RBP20.4■□□□□ 0.86
GDPD3-202ENST00000406256 A0A0G2JLW4 131 aa20.39■□□□□ 0.85
GDPD3-202ENST00000406256 PI4KAP2A4QPH2 592 aa20.38■□□□□ 0.85
GDPD3-202ENST00000406256 FAM177BA6PVY3 158 aa20.38■□□□□ 0.85
GDPD3-202ENST00000406256 CHRNA5P30532 468 aa20.38■□□□□ 0.85
GDPD3-202ENST00000406256 HSP90AB3PQ58FF7 597 aa20.38■□□□□ 0.85
GDPD3-202ENST00000406256 PI4KAP1Q8N8J0 262 aa20.38■□□□□ 0.85
GDPD3-202ENST00000406256 YBX3P16989 372 aaKnown RBP eCLIP20.37■□□□□ 0.85
GDPD3-202ENST00000406256 PARP10Q53GL7 1025 aa20.37■□□□□ 0.85
GDPD3-202ENST00000406256 KSR2Q6VAB6 950 aa20.37■□□□□ 0.85
GDPD3-202ENST00000406256 NUTM1Q86Y26 1132 aa20.37■□□□□ 0.85
GDPD3-202ENST00000406256 MRPL50Q8N5N7 158 aaKnown RBP20.37■□□□□ 0.85
GDPD3-202ENST00000406256 SSH1Q8WYL5 1049 aa20.37■□□□□ 0.85
GDPD3-202ENST00000406256 BRIP1Q9BX63 1249 aa20.37■□□□□ 0.85
GDPD3-202ENST00000406256 MAP3K2Q9Y2U5 619 aa20.37■□□□□ 0.85
GDPD3-202ENST00000406256 KLRG2A4D1S0 409 aaPredicted RBP20.36■□□□□ 0.85
GDPD3-202ENST00000406256 ATP5J2-PTCD1G3V325 749 aa20.36■□□□□ 0.85
GDPD3-202ENST00000406256 TRIM28Q13263 835 aaKnown RBP20.36■□□□□ 0.85
GDPD3-202ENST00000406256 ERFEQ4G0M1 354 aa20.36■□□□□ 0.85
GDPD3-202ENST00000406256 TPTE2Q6XPS3 522 aa20.36■□□□□ 0.85
GDPD3-202ENST00000406256 RIC3Q7Z5B4 369 aa20.36■□□□□ 0.85
GDPD3-202ENST00000406256 METTL22Q9BUU2 404 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms