RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 TTC41PQ6P2S7 1318 aa30.86■■■□□ 2.53
COL13A1-203ENST00000398969 ZNF335Q9H4Z2 1342 aaPredicted RBP30.86■■■□□ 2.53
COL13A1-203ENST00000398969 BTBD11A6QL63 1104 aa30.86■■■□□ 2.53
COL13A1-203ENST00000398969 AKAP4Q5JQC9 854 aa30.86■■■□□ 2.53
COL13A1-203ENST00000398969 RASEFQ8IZ41 740 aa30.85■■■□□ 2.53
COL13A1-203ENST00000398969 SYAP1Q96A49 352 aaPredicted RBP30.85■■■□□ 2.53
COL13A1-203ENST00000398969 PXDNQ92626 1479 aa30.85■■■□□ 2.53
COL13A1-203ENST00000398969 TNS3Q68CZ2 1445 aa30.85■■■□□ 2.53
COL13A1-203ENST00000398969 MTX1Q13505 466 aa30.85■■■□□ 2.53
COL13A1-203ENST00000398969 FOXD4L6Q3SYB3 417 aaPredicted RBP30.85■■■□□ 2.53
COL13A1-203ENST00000398969 ZNF530Q6P9A1 599 aaPredicted RBP30.85■■■□□ 2.53
COL13A1-203ENST00000398969 FOXD4L3Q6VB84 417 aaPredicted RBP30.85■■■□□ 2.53
COL13A1-203ENST00000398969 OFD1O75665 1012 aa30.84■■■□□ 2.53
COL13A1-203ENST00000398969 CWC27Q6UX04 472 aaKnown RBP30.84■■■□□ 2.53
COL13A1-203ENST00000398969 GDPD2Q9HCC8 539 aa30.84■■■□□ 2.53
COL13A1-203ENST00000398969 GADD45BO75293 160 aaPredicted RBP30.84■■■□□ 2.53
COL13A1-203ENST00000398969 KIAA1211Q6ZU35 1233 aa30.84■■■□□ 2.53
COL13A1-203ENST00000398969 EIF2AK3Q9NZJ5 1116 aaKnown RBP30.84■■■□□ 2.53
COL13A1-203ENST00000398969 GLRX3O76003 335 aaKnown RBP30.83■■■□□ 2.53
COL13A1-203ENST00000398969 AK2P54819 239 aa30.83■■■□□ 2.53
COL13A1-203ENST00000398969 USP48Q86UV5 1035 aa30.83■■■□□ 2.53
COL13A1-203ENST00000398969 OS9Q13438 667 aaPredicted RBP30.82■■■□□ 2.52
COL13A1-203ENST00000398969 MPRIPQ6WCQ1 1025 aa30.82■■■□□ 2.52
COL13A1-203ENST00000398969 BRINP3Q76B58 766 aa30.82■■■□□ 2.52
COL13A1-203ENST00000398969 TSPY26PQ9H489 355 aa30.82■■■□□ 2.52
COL13A1-203ENST00000398969 DBF4Q9UBU7 674 aaPredicted RBP30.82■■■□□ 2.52
COL13A1-203ENST00000398969 RGPD5Q99666 1765 aa30.82■■■□□ 2.52
COL13A1-203ENST00000398969 SPATA31A3Q5VYP0 1347 aa30.82■■■□□ 2.52
COL13A1-203ENST00000398969 TPM2P07951 284 aa30.81■■■□□ 2.52
COL13A1-203ENST00000398969 PLEKHO1Q53GL0 409 aaPredicted RBP30.81■■■□□ 2.52
COL13A1-203ENST00000398969 RNF214Q8ND24 703 aa30.81■■■□□ 2.52
COL13A1-203ENST00000398969 SPG7Q9UQ90 795 aa30.81■■■□□ 2.52
COL13A1-203ENST00000398969 ERBB3P21860 1342 aa30.81■■■□□ 2.52
COL13A1-203ENST00000398969 RUFY3Q7L099 469 aa30.81■■■□□ 2.52
COL13A1-203ENST00000398969 CAMTA1Q9Y6Y1 1673 aa30.81■■■□□ 2.52
COL13A1-203ENST00000398969 AMOTQ4VCS5 1084 aa30.8■■■□□ 2.52
COL13A1-203ENST00000398969 TMEM87AQ8NBN3 555 aa30.8■■■□□ 2.52
COL13A1-203ENST00000398969 LIMCH1Q9UPQ0 1083 aa30.8■■■□□ 2.52
COL13A1-203ENST00000398969 ZNF500O60304 480 aaPredicted RBP30.79■■■□□ 2.52
COL13A1-203ENST00000398969 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.79■■■□□ 2.52
COL13A1-203ENST00000398969 CLASRPQ8N2M8 674 aaKnown RBP30.79■■■□□ 2.52
COL13A1-203ENST00000398969 CABLES1Q8TDN4 633 aa30.79■■■□□ 2.52
COL13A1-203ENST00000398969 DIAPH3Q9NSV4 1193 aa30.78■■■□□ 2.52
COL13A1-203ENST00000398969 ALDH1L1O75891 902 aa30.78■■■□□ 2.52
COL13A1-203ENST00000398969 MAP3K2Q9Y2U5 619 aa30.78■■■□□ 2.52
COL13A1-203ENST00000398969 RNMTO43148 476 aaKnown RBP30.77■■■□□ 2.52
COL13A1-203ENST00000398969 PHF14O94880 888 aa30.77■■■□□ 2.52
COL13A1-203ENST00000398969 UBE2Q2Q8WVN8 375 aa30.77■■■□□ 2.52
COL13A1-203ENST00000398969 ZKSCAN5Q9Y2L8 839 aa30.77■■■□□ 2.52
COL13A1-203ENST00000398969 ZSCAN22P10073 491 aaPredicted RBP30.77■■■□□ 2.52
COL13A1-203ENST00000398969 RUFY2Q8WXA3 655 aa30.76■■■□□ 2.52
COL13A1-203ENST00000398969 LARP6Q9BRS8 491 aaKnown RBP30.76■■■□□ 2.52
COL13A1-203ENST00000398969 ECHDC1Q9NTX5 307 aa30.76■■■□□ 2.52
COL13A1-203ENST00000398969 C9orf78Q9NZ63 289 aaPredicted RBP30.76■■■□□ 2.52
COL13A1-203ENST00000398969 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.76■■■□□ 2.52
COL13A1-203ENST00000398969 SLAIN2Q9P270 581 aa30.76■■■□□ 2.51
COL13A1-203ENST00000398969 PROSER3Q2NL68 480 aa30.75■■■□□ 2.51
COL13A1-203ENST00000398969 CCDC39Q9UFE4 941 aa30.75■■■□□ 2.51
COL13A1-203ENST00000398969 TCHHQ07283 1943 aa30.75■■■□□ 2.51
COL13A1-203ENST00000398969 CASTP20810 708 aaKnown RBP30.75■■■□□ 2.51
COL13A1-203ENST00000398969 KSR2Q6VAB6 950 aa30.75■■■□□ 2.51
COL13A1-203ENST00000398969 STX6O43752 255 aa30.74■■■□□ 2.51
COL13A1-203ENST00000398969 GIGYF1O75420 1035 aaPredicted RBP30.74■■■□□ 2.51
COL13A1-203ENST00000398969 SYT1P21579 422 aa30.74■■■□□ 2.51
COL13A1-203ENST00000398969 CNPY2Q9Y2B0 182 aa30.74■■■□□ 2.51
COL13A1-203ENST00000398969 OVOS2A0A0G2JMS6 1433 aa30.74■■■□□ 2.51
COL13A1-203ENST00000398969 CPA1P15085 419 aa30.73■■■□□ 2.51
COL13A1-203ENST00000398969 PTH1RQ03431 593 aa30.73■■■□□ 2.51
COL13A1-203ENST00000398969 C1orf141Q5JVX7 400 aa30.73■■■□□ 2.51
COL13A1-203ENST00000398969 HEG1Q9ULI3 1381 aa30.73■■■□□ 2.51
COL13A1-203ENST00000398969 RRP9O43818 475 aaKnown RBP30.73■■■□□ 2.51
COL13A1-203ENST00000398969 MCM5P33992 734 aa30.73■■■□□ 2.51
COL13A1-203ENST00000398969 ERC1Q8IUD2 1116 aa30.73■■■□□ 2.51
COL13A1-203ENST00000398969 GPATCH3Q96I76 525 aa30.73■■■□□ 2.51
COL13A1-203ENST00000398969 HYPKQ9NX55 129 aa30.73■■■□□ 2.51
COL13A1-203ENST00000398969 PA2G4Q9UQ80 394 aaKnown RBP30.73■■■□□ 2.51
COL13A1-203ENST00000398969 COL18A1P39060 1754 aa30.73■■■□□ 2.51
COL13A1-203ENST00000398969 SMC3Q9UQE7 1217 aa30.72■■■□□ 2.51
COL13A1-203ENST00000398969 IFIT2P09913 472 aaKnown RBP30.71■■■□□ 2.51
COL13A1-203ENST00000398969 HSP90AA2PQ14568 343 aaPredicted RBP30.71■■■□□ 2.51
COL13A1-203ENST00000398969 CWF19L2Q2TBE0 894 aaKnown RBP30.71■■■□□ 2.51
COL13A1-203ENST00000398969 LARGE1O95461 756 aa30.71■■■□□ 2.51
COL13A1-203ENST00000398969 HDAC5Q9UQL6 1122 aa30.71■■■□□ 2.51
COL13A1-203ENST00000398969 KCNB2Q92953 911 aa30.7■■■□□ 2.51
COL13A1-203ENST00000398969 F13A1P00488 732 aa30.7■■■□□ 2.5
COL13A1-203ENST00000398969 VPS53Q5VIR6 699 aa30.7■■■□□ 2.5
COL13A1-203ENST00000398969 ADCK5Q3MIX3 580 aa30.69■■■□□ 2.5
COL13A1-203ENST00000398969 PRPF40BQ6NWY9 871 aaKnown RBP30.69■■■□□ 2.5
COL13A1-203ENST00000398969 EVI5LQ96CN4 794 aa30.69■■■□□ 2.5
COL13A1-203ENST00000398969 JAKMIP1Q96N16 626 aaKnown RBP30.69■■■□□ 2.5
COL13A1-203ENST00000398969 PRAMEF22A3QJZ6 481 aa30.68■■■□□ 2.5
COL13A1-203ENST00000398969 TERF1P54274 439 aa30.68■■■□□ 2.5
COL13A1-203ENST00000398969 CCDC183Q5T5S1 534 aa30.68■■■□□ 2.5
COL13A1-203ENST00000398969 TM6SF1Q9BZW5 370 aa30.68■■■□□ 2.5
COL13A1-203ENST00000398969 NLRP2Q9NX02 1062 aa30.68■■■□□ 2.5
COL13A1-203ENST00000398969 AACSQ86V21 672 aa30.68■■■□□ 2.5
COL13A1-203ENST00000398969 ZSWIM6Q9HCJ5 1215 aa30.68■■■□□ 2.5
COL13A1-203ENST00000398969 PDRG1Q9NUG6 133 aa30.68■■■□□ 2.5
COL13A1-203ENST00000398969 SOS2Q07890 1332 aaPredicted RBP30.67■■■□□ 2.5
COL13A1-203ENST00000398969 CHRNA2Q15822 529 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms