RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 CHL1O00533 1208 aa33.07■■■□□ 2.88
U2AF1-203ENST00000398137 DZIP3Q86Y13 1208 aaKnown RBP33.07■■■□□ 2.88
U2AF1-203ENST00000398137 ZNF526Q8TF50 670 aaPredicted RBP33.07■■■□□ 2.88
U2AF1-203ENST00000398137 CFAP44Q96MT7 982 aa33.07■■■□□ 2.88
U2AF1-203ENST00000398137 IFT57Q9NWB7 429 aa33.07■■■□□ 2.88
U2AF1-203ENST00000398137 BABAM1Q9NWV8 329 aa33.06■■■□□ 2.88
U2AF1-203ENST00000398137 COL11A2P13942 1736 aaPredicted RBP33.05■■■□□ 2.88
U2AF1-203ENST00000398137 ZNF521Q96K83 1311 aa33.04■■■□□ 2.88
U2AF1-203ENST00000398137 ZNF853P0CG23 659 aa33.04■■■□□ 2.88
U2AF1-203ENST00000398137 GNAI1P63096 354 aa33.04■■■□□ 2.88
U2AF1-203ENST00000398137 HNRNPUQ00839 825 aaKnown RBP eCLIP33.04■■■□□ 2.88
U2AF1-203ENST00000398137 PRR5LQ6MZQ0 368 aa33.04■■■□□ 2.88
U2AF1-203ENST00000398137 GPBP1L1Q9HC44 474 aaPredicted RBP33.04■■■□□ 2.88
U2AF1-203ENST00000398137 SBF1O95248 1867 aa33.03■■■□□ 2.88
U2AF1-203ENST00000398137 EIF4A1P60842 406 aaKnown RBP33.03■■■□□ 2.88
U2AF1-203ENST00000398137 WDR63Q8IWG1 891 aa33.03■■■□□ 2.88
U2AF1-203ENST00000398137 CCDC24Q8N4L8 307 aa33.03■■■□□ 2.88
U2AF1-203ENST00000398137 MBIPQ9NS73 344 aa33.03■■■□□ 2.88
U2AF1-203ENST00000398137 IL16Q14005 1332 aa33.02■■■□□ 2.88
U2AF1-203ENST00000398137 C2CD5Q86YS7 1000 aa33.01■■■□□ 2.87
U2AF1-203ENST00000398137 TSR2Q969E8 191 aaKnown RBP32.98■■■□□ 2.87
U2AF1-203ENST00000398137 SETDB2Q96T68 719 aa32.98■■■□□ 2.87
U2AF1-203ENST00000398137 C9orf131Q5VYM1 1079 aa32.97■■■□□ 2.87
U2AF1-203ENST00000398137 CLEC4GQ6UXB4 293 aa32.97■■■□□ 2.87
U2AF1-203ENST00000398137 NPM2Q86SE8 214 aaKnown RBP32.97■■■□□ 2.87
U2AF1-203ENST00000398137 BRIP1Q9BX63 1249 aa32.97■■■□□ 2.87
U2AF1-203ENST00000398137 SPINK5Q9NQ38 1064 aaPredicted RBP32.96■■■□□ 2.87
U2AF1-203ENST00000398137 H0YIN7 160 aa32.95■■■□□ 2.87
U2AF1-203ENST00000398137 KIF3CO14782 793 aa32.95■■■□□ 2.87
U2AF1-203ENST00000398137 KRT24Q2M2I5 525 aa32.95■■■□□ 2.87
U2AF1-203ENST00000398137 PRELPP51888 382 aa32.94■■■□□ 2.86
U2AF1-203ENST00000398137 TTLL6Q8N841 843 aa32.94■■■□□ 2.86
U2AF1-203ENST00000398137 HLFQ16534 295 aa32.93■■■□□ 2.86
U2AF1-203ENST00000398137 FANCIQ9NVI1 1328 aa32.93■■■□□ 2.86
U2AF1-203ENST00000398137 GOLGA2Q08379 1002 aa32.92■■■□□ 2.86
U2AF1-203ENST00000398137 CNBD1Q8NA66 436 aa32.92■■■□□ 2.86
U2AF1-203ENST00000398137 RGL2O15211 777 aa32.91■■■□□ 2.86
U2AF1-203ENST00000398137 RASSF7Q02833 373 aa32.91■■■□□ 2.86
U2AF1-203ENST00000398137 PDE6BP35913 854 aa32.9■■■□□ 2.86
U2AF1-203ENST00000398137 NUP98P52948 1817 aa32.9■■■□□ 2.86
U2AF1-203ENST00000398137 MYH16Q9H6N6 1097 aa32.89■■■□□ 2.86
U2AF1-203ENST00000398137 RNF181Q9P0P0 153 aa32.88■■■□□ 2.85
U2AF1-203ENST00000398137 ZNF652Q9Y2D9 606 aa32.88■■■□□ 2.85
U2AF1-203ENST00000398137 CACNA1SQ13698 1873 aa32.88■■■□□ 2.85
U2AF1-203ENST00000398137 CCDC88AQ3V6T2 1871 aa32.88■■■□□ 2.85
U2AF1-203ENST00000398137 SLX4Q8IY92 1834 aa32.88■■■□□ 2.85
U2AF1-203ENST00000398137 TTLL7Q6ZT98 887 aa32.87■■■□□ 2.85
U2AF1-203ENST00000398137 ZNF622Q969S3 477 aaKnown RBP eCLIP32.87■■■□□ 2.85
U2AF1-203ENST00000398137 PDZRN3Q9UPQ7 1066 aa32.87■■■□□ 2.85
U2AF1-203ENST00000398137 NIP7Q9Y221 180 aaKnown RBP eCLIP32.87■■■□□ 2.85
U2AF1-203ENST00000398137 ARFGEF2Q9Y6D5 1785 aa32.86■■■□□ 2.85
U2AF1-203ENST00000398137 NFKBIEO00221 500 aa32.86■■■□□ 2.85
U2AF1-203ENST00000398137 LRP10Q7Z4F1 713 aa32.86■■■□□ 2.85
U2AF1-203ENST00000398137 CDCA7LQ96GN5 454 aa32.86■■■□□ 2.85
U2AF1-203ENST00000398137 ZBED9Q6R2W3 1325 aa32.85■■■□□ 2.85
U2AF1-203ENST00000398137 FER1L6Q2WGJ9 1857 aa32.85■■■□□ 2.85
U2AF1-203ENST00000398137 E9PSI1 815 aa32.85■■■□□ 2.85
U2AF1-203ENST00000398137 SRGNP10124 158 aa32.85■■■□□ 2.85
U2AF1-203ENST00000398137 DUSP27Q5VZP5 1158 aa32.85■■■□□ 2.85
U2AF1-203ENST00000398137 NBPF5PQ86XG9 351 aaPredicted RBP32.85■■■□□ 2.85
U2AF1-203ENST00000398137 NMRK2Q9NPI5 230 aa32.85■■■□□ 2.85
U2AF1-203ENST00000398137 ST5P78524 1137 aa32.84■■■□□ 2.85
U2AF1-203ENST00000398137 C8orf58Q8NAV2 365 aa32.84■■■□□ 2.85
U2AF1-203ENST00000398137 MYL6BP14649 208 aa32.83■■■□□ 2.85
U2AF1-203ENST00000398137 SLFN5Q08AF3 891 aa32.83■■■□□ 2.85
U2AF1-203ENST00000398137 PDIA6Q15084 440 aa32.83■■■□□ 2.85
U2AF1-203ENST00000398137 MAP3K15Q6ZN16 1313 aa32.82■■■□□ 2.84
U2AF1-203ENST00000398137 ELL2O00472 640 aaPredicted RBP32.82■■■□□ 2.84
U2AF1-203ENST00000398137 KLRG2A4D1S0 409 aaPredicted RBP32.81■■■□□ 2.84
U2AF1-203ENST00000398137 ERVV-1B6SEH8 477 aa32.81■■■□□ 2.84
U2AF1-203ENST00000398137 TSPYL6Q8N831 410 aa32.81■■■□□ 2.84
U2AF1-203ENST00000398137 TNRC6CQ9HCJ0 1690 aaKnown RBP32.81■■■□□ 2.84
U2AF1-203ENST00000398137 NPHP1O15259 732 aa32.8■■■□□ 2.84
U2AF1-203ENST00000398137 C21orf2O43822 256 aa32.8■■■□□ 2.84
U2AF1-203ENST00000398137 HOXB7P09629 217 aa32.8■■■□□ 2.84
U2AF1-203ENST00000398137 EIF2S2P20042 333 aaKnown RBP32.8■■■□□ 2.84
U2AF1-203ENST00000398137 STYK1Q6J9G0 422 aa32.8■■■□□ 2.84
U2AF1-203ENST00000398137 NECTIN2Q92692 538 aa32.8■■■□□ 2.84
U2AF1-203ENST00000398137 TIAM2Q8IVF5 1701 aa32.8■■■□□ 2.84
U2AF1-203ENST00000398137 ERBB4Q15303 1308 aa32.79■■■□□ 2.84
U2AF1-203ENST00000398137 FAM177BA6PVY3 158 aa32.79■■■□□ 2.84
U2AF1-203ENST00000398137 EXOSC9Q06265 439 aaKnown RBP32.79■■■□□ 2.84
U2AF1-203ENST00000398137 PROSER3Q2NL68 480 aa32.79■■■□□ 2.84
U2AF1-203ENST00000398137 ZNF219Q9P2Y4 722 aaPredicted RBP32.79■■■□□ 2.84
U2AF1-203ENST00000398137 LMNB1P20700 586 aa32.78■■■□□ 2.84
U2AF1-203ENST00000398137 TPTE2Q6XPS3 522 aa32.78■■■□□ 2.84
U2AF1-203ENST00000398137 MASTLQ96GX5 879 aa32.78■■■□□ 2.84
U2AF1-203ENST00000398137 YTHDC1Q96MU7 727 aaKnown RBP32.78■■■□□ 2.84
U2AF1-203ENST00000398137 CEP350Q5VT06 3117 aa32.77■■■□□ 2.84
U2AF1-203ENST00000398137 ZBTB3Q9H5J0 574 aa32.77■■■□□ 2.84
U2AF1-203ENST00000398137 UBN2Q6ZU65 1347 aa32.77■■■□□ 2.84
U2AF1-203ENST00000398137 ABCC12Q96J65 1359 aa32.76■■■□□ 2.83
U2AF1-203ENST00000398137 ANXA1P04083 346 aa32.76■■■□□ 2.83
U2AF1-203ENST00000398137 HDGFL1Q5TGJ6 251 aa32.76■■■□□ 2.83
U2AF1-203ENST00000398137 PRPF40BQ6NWY9 871 aaKnown RBP32.76■■■□□ 2.83
U2AF1-203ENST00000398137 CNKSR1Q969H4 720 aa32.76■■■□□ 2.83
U2AF1-203ENST00000398137 TWISTNBQ3B726 338 aaPredicted RBP32.75■■■□□ 2.83
U2AF1-203ENST00000398137 DICER1Q9UPY3 1922 aaKnown RBP32.75■■■□□ 2.83
U2AF1-203ENST00000398137 KIF6Q6ZMV9 814 aa32.74■■■□□ 2.83
U2AF1-203ENST00000398137 C7orf43Q8WVR3 580 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms