RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 METTL22Q9BUU2 404 aaPredicted RBP34.67■■■■□ 3.14
CPNE1-203ENST00000397442 IL6STP40189 918 aaPredicted RBP34.66■■■■□ 3.14
CPNE1-203ENST00000397442 KDM2BQ8NHM5 1336 aa34.65■■■■□ 3.14
CPNE1-203ENST00000397442 LINS1Q8NG48 757 aa34.65■■■■□ 3.14
CPNE1-203ENST00000397442 USP44Q9H0E7 712 aa34.65■■■■□ 3.14
CPNE1-203ENST00000397442 C1orf115Q9H7X2 142 aa34.65■■■■□ 3.14
CPNE1-203ENST00000397442 TAF1LQ8IZX4 1826 aa34.65■■■■□ 3.14
CPNE1-203ENST00000397442 CCNL1Q9UK58 526 aaPredicted RBP34.64■■■■□ 3.14
CPNE1-203ENST00000397442 ZNF330Q9Y3S2 320 aaPredicted RBP34.64■■■■□ 3.14
CPNE1-203ENST00000397442 ALDH1L1O75891 902 aa34.63■■■■□ 3.13
CPNE1-203ENST00000397442 IGHDP01880 384 aa34.63■■■■□ 3.13
CPNE1-203ENST00000397442 IGKV5-2P06315 115 aa34.63■■■■□ 3.13
CPNE1-203ENST00000397442 EIF5P55010 431 aaKnown RBP34.63■■■■□ 3.13
CPNE1-203ENST00000397442 CWF19L2Q2TBE0 894 aaKnown RBP34.63■■■■□ 3.13
CPNE1-203ENST00000397442 MYD88Q99836 296 aa34.61■■■■□ 3.13
CPNE1-203ENST00000397442 CNTNAP4Q9C0A0 1308 aa34.61■■■■□ 3.13
CPNE1-203ENST00000397442 IBTKQ9P2D0 1353 aaPredicted RBP34.61■■■■□ 3.13
CPNE1-203ENST00000397442 ZBTB3Q9H5J0 574 aa34.6■■■■□ 3.13
CPNE1-203ENST00000397442 NEXNQ0ZGT2 675 aa34.59■■■■□ 3.13
CPNE1-203ENST00000397442 GNAI3P08754 354 aa34.58■■■■□ 3.13
CPNE1-203ENST00000397442 NEURL1BA8MQ27 555 aa34.57■■■■□ 3.13
CPNE1-203ENST00000397442 KIF6Q6ZMV9 814 aa34.57■■■■□ 3.13
CPNE1-203ENST00000397442 MAP3K15Q6ZN16 1313 aa34.57■■■■□ 3.13
CPNE1-203ENST00000397442 RC3H1Q5TC82 1133 aaKnown RBP34.57■■■■□ 3.12
CPNE1-203ENST00000397442 CENPQQ7L2Z9 268 aaPredicted RBP34.57■■■■□ 3.12
CPNE1-203ENST00000397442 LRRC4BQ9NT99 713 aa34.57■■■■□ 3.12
CPNE1-203ENST00000397442 HDAC1Q13547 482 aaPredicted RBP34.56■■■■□ 3.12
CPNE1-203ENST00000397442 SIRT2Q8IXJ6 389 aa34.56■■■■□ 3.12
CPNE1-203ENST00000397442 AFDNP55196 1824 aaKnown RBP34.56■■■■□ 3.12
CPNE1-203ENST00000397442 NBPF7P0C2Y1 421 aaPredicted RBP34.55■■■■□ 3.12
CPNE1-203ENST00000397442 TNS1Q9HBL0 1735 aaKnown RBP34.55■■■■□ 3.12
CPNE1-203ENST00000397442 DZIP3Q86Y13 1208 aaKnown RBP34.54■■■■□ 3.12
CPNE1-203ENST00000397442 RWDD1Q9H446 243 aaPredicted RBP34.54■■■■□ 3.12
CPNE1-203ENST00000397442 C4BP0C0L5 1744 aa34.53■■■■□ 3.12
CPNE1-203ENST00000397442 UTYO14607 1347 aa34.53■■■■□ 3.12
CPNE1-203ENST00000397442 ATP5J2-PTCD1G3V325 749 aa34.53■■■■□ 3.12
CPNE1-203ENST00000397442 GNAI2P04899 355 aa34.53■■■■□ 3.12
CPNE1-203ENST00000397442 UBTFL1P0CB47 393 aaPredicted RBP34.53■■■■□ 3.12
CPNE1-203ENST00000397442 GCKRQ14397 625 aa34.52■■■■□ 3.12
CPNE1-203ENST00000397442 TBC1D2BQ9UPU7 963 aa34.52■■■■□ 3.12
CPNE1-203ENST00000397442 COL15A1P39059 1388 aa34.52■■■■□ 3.12
CPNE1-203ENST00000397442 SLC27A3Q5K4L6 730 aa34.51■■■■□ 3.12
CPNE1-203ENST00000397442 CEP85Q6P2H3 762 aa34.51■■■■□ 3.12
CPNE1-203ENST00000397442 ERVV-1B6SEH8 477 aa34.5■■■■□ 3.11
CPNE1-203ENST00000397442 HLFQ16534 295 aa34.5■■■■□ 3.11
CPNE1-203ENST00000397442 GIGYF2Q6Y7W6 1299 aaKnown RBP34.5■■■■□ 3.11
CPNE1-203ENST00000397442 ARXQ96QS3 562 aa34.5■■■■□ 3.11
CPNE1-203ENST00000397442 NUP98P52948 1817 aa34.5■■■■□ 3.11
CPNE1-203ENST00000397442 GRM8O00222 908 aa34.5■■■■□ 3.11
CPNE1-203ENST00000397442 PLSCR1O15162 318 aa34.5■■■■□ 3.11
CPNE1-203ENST00000397442 TCIRG1Q13488 830 aa34.5■■■■□ 3.11
CPNE1-203ENST00000397442 NPM2Q86SE8 214 aaKnown RBP34.5■■■■□ 3.11
CPNE1-203ENST00000397442 PROM2Q8N271 834 aa34.5■■■■□ 3.11
CPNE1-203ENST00000397442 ANKRD44Q8N8A2 993 aa34.5■■■■□ 3.11
CPNE1-203ENST00000397442 C9orf78Q9NZ63 289 aaPredicted RBP34.5■■■■□ 3.11
CPNE1-203ENST00000397442 LRRFIP2Q9Y608 721 aaKnown RBP34.5■■■■□ 3.11
CPNE1-203ENST00000397442 RPAP2Q8IXW5 612 aaPredicted RBP34.49■■■■□ 3.11
CPNE1-203ENST00000397442 ISCA1Q9BUE6 129 aa34.49■■■■□ 3.11
CPNE1-203ENST00000397442 RPS6KA4O75676 772 aa34.47■■■■□ 3.11
CPNE1-203ENST00000397442 APBA3O96018 575 aa34.47■■■■□ 3.11
CPNE1-203ENST00000397442 ANKRD36CQ5JPF3 1778 aa34.47■■■■□ 3.11
CPNE1-203ENST00000397442 TXNRD1Q16881 649 aa34.46■■■■□ 3.11
CPNE1-203ENST00000397442 CAMTA2O94983 1202 aa34.45■■■■□ 3.11
CPNE1-203ENST00000397442 TRIM28Q13263 835 aaKnown RBP34.45■■■■□ 3.11
CPNE1-203ENST00000397442 BCORQ6W2J9 1755 aa34.45■■■■□ 3.1
CPNE1-203ENST00000397442 GNPATO15228 680 aa34.44■■■■□ 3.1
CPNE1-203ENST00000397442 CCDC191Q8NCU4 936 aa34.44■■■■□ 3.1
CPNE1-203ENST00000397442 AMIGO3Q86WK7 504 aa34.44■■■■□ 3.1
CPNE1-203ENST00000397442 SMIM5Q71RC9 77 aa34.43■■■■□ 3.1
CPNE1-203ENST00000397442 CWC25Q9NXE8 425 aaPredicted RBP34.43■■■■□ 3.1
CPNE1-203ENST00000397442 RGPD3A6NKT7 1758 aaPredicted RBP34.42■■■■□ 3.1
CPNE1-203ENST00000397442 RGPD4Q7Z3J3 1758 aa34.42■■■■□ 3.1
CPNE1-203ENST00000397442 A0A087WZG4 1122 aa34.42■■■■□ 3.1
CPNE1-203ENST00000397442 HSP90AB3PQ58FF7 597 aa34.41■■■■□ 3.1
CPNE1-203ENST00000397442 KAZALD1Q96I82 304 aa34.41■■■■□ 3.1
CPNE1-203ENST00000397442 CASP7P55210 303 aa34.41■■■■□ 3.1
CPNE1-203ENST00000397442 SMC5Q8IY18 1101 aa34.41■■■■□ 3.1
CPNE1-203ENST00000397442 ATP8B2P98198 1209 aa34.4■■■■□ 3.1
CPNE1-203ENST00000397442 SUCLG2Q96I99 432 aa34.4■■■■□ 3.1
CPNE1-203ENST00000397442 RTCBQ9Y3I0 505 aaKnown RBP34.4■■■■□ 3.1
CPNE1-203ENST00000397442 UBR3Q6ZT12 1888 aa34.4■■■■□ 3.1
CPNE1-203ENST00000397442 H7C1W4 665 aa34.39■■■■□ 3.1
CPNE1-203ENST00000397442 SCN7AQ01118 1682 aa34.38■■■■□ 3.09
CPNE1-203ENST00000397442 PNMA6EA0A0J9YXQ4 647 aa34.38■■■■□ 3.09
CPNE1-203ENST00000397442 UBE3BQ7Z3V4 1068 aa34.38■■■■□ 3.09
CPNE1-203ENST00000397442 ZNF34Q8IZ26 560 aa34.38■■■■□ 3.09
CPNE1-203ENST00000397442 JARID2Q92833 1246 aaPredicted RBP34.38■■■■□ 3.09
CPNE1-203ENST00000397442 AK7Q96M32 723 aa34.38■■■■□ 3.09
CPNE1-203ENST00000397442 HDAC5Q9UQL6 1122 aa34.38■■■■□ 3.09
CPNE1-203ENST00000397442 GPTP24298 496 aa34.36■■■■□ 3.09
CPNE1-203ENST00000397442 NLRP10Q86W26 655 aa34.36■■■■□ 3.09
CPNE1-203ENST00000397442 C4AP0C0L4 1744 aa34.36■■■■□ 3.09
CPNE1-203ENST00000397442 MTX1Q13505 466 aa34.35■■■■□ 3.09
CPNE1-203ENST00000397442 UBN2Q6ZU65 1347 aa34.34■■■■□ 3.09
CPNE1-203ENST00000397442 RGL2O15211 777 aa34.34■■■■□ 3.09
CPNE1-203ENST00000397442 SKAP1Q86WV1 359 aa34.34■■■■□ 3.09
CPNE1-203ENST00000397442 ARHGEF1Q92888 912 aaKnown RBP34.34■■■■□ 3.09
CPNE1-203ENST00000397442 DCTPP1Q9H773 170 aa34.34■■■■□ 3.09
CPNE1-203ENST00000397442 NARFQ9UHQ1 456 aa34.34■■■■□ 3.09
CPNE1-203ENST00000397442 HMMRO75330 724 aa34.33■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms