RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 ANXA1P04083 346 aa23■■□□□ 1.27
TNFSF13-204ENST00000396542 TBC1D9BQ66K14 1250 aa23■■□□□ 1.27
TNFSF13-204ENST00000396542 TTLL7Q6ZT98 887 aa23■■□□□ 1.27
TNFSF13-204ENST00000396542 MYH16Q9H6N6 1097 aa23■■□□□ 1.27
TNFSF13-204ENST00000396542 DBF4Q9UBU7 674 aaPredicted RBP23■■□□□ 1.27
TNFSF13-204ENST00000396542 ERVV-1B6SEH8 477 aa22.99■■□□□ 1.27
TNFSF13-204ENST00000396542 GOLGA2Q08379 1002 aa22.99■■□□□ 1.27
TNFSF13-204ENST00000396542 ZNF652Q9Y2D9 606 aa22.99■■□□□ 1.27
TNFSF13-204ENST00000396542 MAP3K15Q6ZN16 1313 aa22.99■■□□□ 1.27
TNFSF13-204ENST00000396542 TWISTNBQ3B726 338 aaPredicted RBP22.98■■□□□ 1.27
TNFSF13-204ENST00000396542 KIF6Q6ZMV9 814 aa22.98■■□□□ 1.27
TNFSF13-204ENST00000396542 CHMP4AQ9BY43 222 aa22.98■■□□□ 1.27
TNFSF13-204ENST00000396542 HLFQ16534 295 aa22.97■■□□□ 1.27
TNFSF13-204ENST00000396542 KLHL34Q8N239 644 aa22.97■■□□□ 1.27
TNFSF13-204ENST00000396542 CARMIL3Q8ND23 1372 aa22.97■■□□□ 1.27
TNFSF13-204ENST00000396542 NLGN2Q8NFZ4 835 aa22.96■■□□□ 1.27
TNFSF13-204ENST00000396542 HYPKQ9NX55 129 aa22.96■■□□□ 1.27
TNFSF13-204ENST00000396542 ATP10DQ9P241 1426 aa22.96■■□□□ 1.27
TNFSF13-204ENST00000396542 ANKRD36CQ5JPF3 1778 aa22.96■■□□□ 1.27
TNFSF13-204ENST00000396542 SERPINB2P05120 415 aa22.95■■□□□ 1.26
TNFSF13-204ENST00000396542 EXOSC9Q06265 439 aaKnown RBP22.95■■□□□ 1.26
TNFSF13-204ENST00000396542 CCDC30Q5VVM6 783 aa22.95■■□□□ 1.26
TNFSF13-204ENST00000396542 BICDL1Q6ZP65 573 aa22.95■■□□□ 1.26
TNFSF13-204ENST00000396542 COPS6Q7L5N1 327 aa22.95■■□□□ 1.26
TNFSF13-204ENST00000396542 XAGE3Q8WTP9 111 aa22.95■■□□□ 1.26
TNFSF13-204ENST00000396542 E9PSI1 815 aa22.94■■□□□ 1.26
TNFSF13-204ENST00000396542 SETDB2Q96T68 719 aa22.94■■□□□ 1.26
TNFSF13-204ENST00000396542 ZBTB3Q9H5J0 574 aa22.94■■□□□ 1.26
TNFSF13-204ENST00000396542 CACNA1FO60840 1977 aa22.94■■□□□ 1.26
TNFSF13-204ENST00000396542 SLFN5Q08AF3 891 aa22.93■■□□□ 1.26
TNFSF13-204ENST00000396542 GIGYF2Q6Y7W6 1299 aaKnown RBP22.93■■□□□ 1.26
TNFSF13-204ENST00000396542 PXDNLA1KZ92 1463 aa22.92■■□□□ 1.26
TNFSF13-204ENST00000396542 ANKRD31Q8N7Z5 1873 aa22.92■■□□□ 1.26
TNFSF13-204ENST00000396542 N4BP2Q86UW6 1770 aaPredicted RBP22.92■■□□□ 1.26
TNFSF13-204ENST00000396542 ARFGEF2Q9Y6D5 1785 aa22.92■■□□□ 1.26
TNFSF13-204ENST00000396542 VAMP4O75379 141 aa22.92■■□□□ 1.26
TNFSF13-204ENST00000396542 AIMP1Q12904 312 aaKnown RBP22.91■■□□□ 1.26
TNFSF13-204ENST00000396542 TRMT2AQ8IZ69 625 aaKnown RBP22.91■■□□□ 1.26
TNFSF13-204ENST00000396542 NIP7Q9Y221 180 aaKnown RBP eCLIP22.91■■□□□ 1.26
TNFSF13-204ENST00000396542 BRCA1P38398 1863 aaKnown RBP22.91■■□□□ 1.26
TNFSF13-204ENST00000396542 TGFB2P61812 414 aa22.9■■□□□ 1.26
TNFSF13-204ENST00000396542 DLEC1Q9Y238 1755 aa22.89■■□□□ 1.26
TNFSF13-204ENST00000396542 PRR5LQ6MZQ0 368 aa22.89■■□□□ 1.25
TNFSF13-204ENST00000396542 ZNF34Q8IZ26 560 aa22.89■■□□□ 1.25
TNFSF13-204ENST00000396542 PLBD2Q8NHP8 589 aa22.89■■□□□ 1.25
TNFSF13-204ENST00000396542 CDCA7LQ96GN5 454 aa22.89■■□□□ 1.25
TNFSF13-204ENST00000396542 PHAXQ9H814 394 aaKnown RBP22.89■■□□□ 1.25
TNFSF13-204ENST00000396542 STK31Q9BXU1 1019 aa22.88■■□□□ 1.25
TNFSF13-204ENST00000396542 UBN2Q6ZU65 1347 aa22.87■■□□□ 1.25
TNFSF13-204ENST00000396542 ANKRD13DQ6ZTN6 518 aa22.87■■□□□ 1.25
TNFSF13-204ENST00000396542 IBTKQ9P2D0 1353 aaPredicted RBP22.87■■□□□ 1.25
TNFSF13-204ENST00000396542 HNRNPUQ00839 825 aaKnown RBP eCLIP22.86■■□□□ 1.25
TNFSF13-204ENST00000396542 CNBD1Q8NA66 436 aa22.86■■□□□ 1.25
TNFSF13-204ENST00000396542 TCERG1O14776 1098 aaKnown RBP22.85■■□□□ 1.25
TNFSF13-204ENST00000396542 HSP90AB3PQ58FF7 597 aa22.85■■□□□ 1.25
TNFSF13-204ENST00000396542 NBPF5PQ86XG9 351 aaPredicted RBP22.85■■□□□ 1.25
TNFSF13-204ENST00000396542 SLC4A2P04920 1241 aa22.84■■□□□ 1.25
TNFSF13-204ENST00000396542 GPTP24298 496 aa22.84■■□□□ 1.25
TNFSF13-204ENST00000396542 TCIRG1Q13488 830 aa22.84■■□□□ 1.25
TNFSF13-204ENST00000396542 TPTE2Q6XPS3 522 aa22.84■■□□□ 1.25
TNFSF13-204ENST00000396542 BRIP1Q9BX63 1249 aa22.84■■□□□ 1.25
TNFSF13-204ENST00000396542 COL11A2P13942 1736 aaPredicted RBP22.84■■□□□ 1.25
TNFSF13-204ENST00000396542 A0A0G2JLW4 131 aa22.83■■□□□ 1.25
TNFSF13-204ENST00000396542 DPEP1P16444 411 aa22.83■■□□□ 1.25
TNFSF13-204ENST00000396542 KCNA3P22001 575 aa22.83■■□□□ 1.25
TNFSF13-204ENST00000396542 PARP10Q53GL7 1025 aa22.83■■□□□ 1.25
TNFSF13-204ENST00000396542 ST5P78524 1137 aa22.82■■□□□ 1.24
TNFSF13-204ENST00000396542 SUSD4Q5VX71 490 aa22.82■■□□□ 1.24
TNFSF13-204ENST00000396542 NYXQ9GZU5 481 aa22.82■■□□□ 1.24
TNFSF13-204ENST00000396542 GOLGB1Q14789 3259 aaKnown RBP22.82■■□□□ 1.24
TNFSF13-204ENST00000396542 G2E3Q7L622 706 aa22.81■■□□□ 1.24
TNFSF13-204ENST00000396542 CCDC24Q8N4L8 307 aa22.81■■□□□ 1.24
TNFSF13-204ENST00000396542 RIC1Q4ADV7 1423 aa22.81■■□□□ 1.24
TNFSF13-204ENST00000396542 TNRC6CQ9HCJ0 1690 aaKnown RBP22.81■■□□□ 1.24
TNFSF13-204ENST00000396542 NTSR2O95665 410 aa22.8■■□□□ 1.24
TNFSF13-204ENST00000396542 DDX58O95786 925 aaKnown RBP22.8■■□□□ 1.24
TNFSF13-204ENST00000396542 CHRNA5P30532 468 aa22.8■■□□□ 1.24
TNFSF13-204ENST00000396542 RIC3Q7Z5B4 369 aa22.8■■□□□ 1.24
TNFSF13-204ENST00000396542 NLRP10Q86W26 655 aa22.8■■□□□ 1.24
TNFSF13-204ENST00000396542 ISCA1Q9BUE6 129 aa22.8■■□□□ 1.24
TNFSF13-204ENST00000396542 ARFGEF1Q9Y6D6 1849 aa22.8■■□□□ 1.24
TNFSF13-204ENST00000396542 ZBED9Q6R2W3 1325 aa22.8■■□□□ 1.24
TNFSF13-204ENST00000396542 ADCY9O60503 1353 aa22.79■■□□□ 1.24
TNFSF13-204ENST00000396542 DCAF8L1A6NGE4 600 aa22.79■■□□□ 1.24
TNFSF13-204ENST00000396542 FAM177BA6PVY3 158 aa22.79■■□□□ 1.24
TNFSF13-204ENST00000396542 NPHP1O15259 732 aa22.79■■□□□ 1.24
TNFSF13-204ENST00000396542 YBX3P16989 372 aaKnown RBP eCLIP22.79■■□□□ 1.24
TNFSF13-204ENST00000396542 PDE6BP35913 854 aa22.79■■□□□ 1.24
TNFSF13-204ENST00000396542 FLIIQ13045 1269 aa22.79■■□□□ 1.24
TNFSF13-204ENST00000396542 PPP1R42Q7Z4L9 355 aa22.79■■□□□ 1.24
TNFSF13-204ENST00000396542 PDZRN3Q9UPQ7 1066 aa22.79■■□□□ 1.24
TNFSF13-204ENST00000396542 RNF123Q5XPI4 1314 aa22.79■■□□□ 1.24
TNFSF13-204ENST00000396542 ABCC12Q96J65 1359 aa22.78■■□□□ 1.24
TNFSF13-204ENST00000396542 TRIM28Q13263 835 aaKnown RBP22.78■■□□□ 1.24
TNFSF13-204ENST00000396542 KSR2Q6VAB6 950 aa22.78■■□□□ 1.24
TNFSF13-204ENST00000396542 ZNF428Q96B54 188 aa22.78■■□□□ 1.24
TNFSF13-204ENST00000396542 KLRG2A4D1S0 409 aaPredicted RBP22.77■■□□□ 1.24
TNFSF13-204ENST00000396542 PI4KAP2A4QPH2 592 aa22.77■■□□□ 1.24
TNFSF13-204ENST00000396542 GPR162Q16538 588 aa22.77■■□□□ 1.24
TNFSF13-204ENST00000396542 ERFEQ4G0M1 354 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms