RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 TXNRD1Q16881 649 aa30.71■■■□□ 2.51
LRFN4-202ENST00000393952 RC3H1Q5TC82 1133 aaKnown RBP30.71■■■□□ 2.51
LRFN4-202ENST00000393952 PROM2Q8N271 834 aa30.71■■■□□ 2.51
LRFN4-202ENST00000393952 BEND3Q5T5X7 828 aa30.7■■■□□ 2.5
LRFN4-202ENST00000393952 ZBTB3Q9H5J0 574 aa30.7■■■□□ 2.5
LRFN4-202ENST00000393952 ATP10DQ9P241 1426 aa30.7■■■□□ 2.5
LRFN4-202ENST00000393952 PPP4R2Q9NY27 417 aa30.69■■■□□ 2.5
LRFN4-202ENST00000393952 RGPD3A6NKT7 1758 aaPredicted RBP30.69■■■□□ 2.5
LRFN4-202ENST00000393952 RGPD4Q7Z3J3 1758 aa30.69■■■□□ 2.5
LRFN4-202ENST00000393952 ZBTB7BO15156 539 aaPredicted RBP30.68■■■□□ 2.5
LRFN4-202ENST00000393952 KIF6Q6ZMV9 814 aa30.68■■■□□ 2.5
LRFN4-202ENST00000393952 ARXQ96QS3 562 aa30.68■■■□□ 2.5
LRFN4-202ENST00000393952 SRCIN1Q9C0H9 1055 aa30.68■■■□□ 2.5
LRFN4-202ENST00000393952 NPM2Q86SE8 214 aaKnown RBP30.67■■■□□ 2.5
LRFN4-202ENST00000393952 METTL22Q9BUU2 404 aaPredicted RBP30.67■■■□□ 2.5
LRFN4-202ENST00000393952 MYD88Q99836 296 aa30.66■■■□□ 2.5
LRFN4-202ENST00000393952 COL15A1P39059 1388 aa30.66■■■□□ 2.5
LRFN4-202ENST00000393952 MAP3K15Q6ZN16 1313 aa30.65■■■□□ 2.5
LRFN4-202ENST00000393952 GNPATO15228 680 aa30.65■■■□□ 2.5
LRFN4-202ENST00000393952 DZIP3Q86Y13 1208 aaKnown RBP30.65■■■□□ 2.5
LRFN4-202ENST00000393952 ZBTB40Q9NUA8 1239 aa30.65■■■□□ 2.5
LRFN4-202ENST00000393952 TBC1D2BQ9UPU7 963 aa30.65■■■□□ 2.5
LRFN4-202ENST00000393952 RPS6KA4O75676 772 aa30.63■■■□□ 2.49
LRFN4-202ENST00000393952 NEXNQ0ZGT2 675 aa30.63■■■□□ 2.49
LRFN4-202ENST00000393952 AAMPQ13685 434 aa30.63■■■□□ 2.49
LRFN4-202ENST00000393952 LINS1Q8NG48 757 aa30.63■■■□□ 2.49
LRFN4-202ENST00000393952 IGKV5-2P06315 115 aa30.62■■■□□ 2.49
LRFN4-202ENST00000393952 CWF19L2Q2TBE0 894 aaKnown RBP30.62■■■□□ 2.49
LRFN4-202ENST00000393952 SMIM5Q71RC9 77 aa30.62■■■□□ 2.49
LRFN4-202ENST00000393952 AK7Q96M32 723 aa30.62■■■□□ 2.49
LRFN4-202ENST00000393952 MEIS3Q99687 375 aa30.62■■■□□ 2.49
LRFN4-202ENST00000393952 CHMP4BQ9H444 224 aaKnown RBP30.62■■■□□ 2.49
LRFN4-202ENST00000393952 ALDH1L1O75891 902 aa30.62■■■□□ 2.49
LRFN4-202ENST00000393952 AFDNP55196 1824 aaKnown RBP30.61■■■□□ 2.49
LRFN4-202ENST00000393952 AMIGO3Q86WK7 504 aa30.6■■■□□ 2.49
LRFN4-202ENST00000393952 RTCBQ9Y3I0 505 aaKnown RBP30.6■■■□□ 2.49
LRFN4-202ENST00000393952 NUP98P52948 1817 aa30.6■■■□□ 2.49
LRFN4-202ENST00000393952 UBR3Q6ZT12 1888 aa30.6■■■□□ 2.49
LRFN4-202ENST00000393952 A0A087WZG4 1122 aa30.59■■■□□ 2.49
LRFN4-202ENST00000393952 EN1Q05925 392 aaPredicted RBP30.59■■■□□ 2.49
LRFN4-202ENST00000393952 SF3B2Q13435 895 aaKnown RBP30.59■■■□□ 2.49
LRFN4-202ENST00000393952 HLFQ16534 295 aa30.59■■■□□ 2.49
LRFN4-202ENST00000393952 NEURL1BA8MQ27 555 aa30.58■■■□□ 2.49
LRFN4-202ENST00000393952 ERVV-1B6SEH8 477 aa30.58■■■□□ 2.49
LRFN4-202ENST00000393952 ATP5J2-PTCD1G3V325 749 aa30.58■■■□□ 2.49
LRFN4-202ENST00000393952 B4GALNT3Q6L9W6 998 aa30.58■■■□□ 2.49
LRFN4-202ENST00000393952 GIGYF2Q6Y7W6 1299 aaKnown RBP30.58■■■□□ 2.49
LRFN4-202ENST00000393952 CAMKK2Q96RR4 588 aa30.58■■■□□ 2.49
LRFN4-202ENST00000393952 USP44Q9H0E7 712 aa30.58■■■□□ 2.49
LRFN4-202ENST00000393952 C1orf115Q9H7X2 142 aa30.58■■■□□ 2.49
LRFN4-202ENST00000393952 BCORQ6W2J9 1755 aa30.57■■■□□ 2.49
LRFN4-202ENST00000393952 CAMTA2O94983 1202 aa30.57■■■□□ 2.48
LRFN4-202ENST00000393952 EZH2Q15910 746 aaKnown RBP30.57■■■□□ 2.48
LRFN4-202ENST00000393952 CCDC136Q96JN2 1154 aa30.57■■■□□ 2.48
LRFN4-202ENST00000393952 PCDHB15Q9Y5E8 787 aa30.57■■■□□ 2.48
LRFN4-202ENST00000393952 ANKRD36CQ5JPF3 1778 aa30.56■■■□□ 2.48
LRFN4-202ENST00000393952 HMGB2P26583 209 aaKnown RBP30.56■■■□□ 2.48
LRFN4-202ENST00000393952 TCIRG1Q13488 830 aa30.56■■■□□ 2.48
LRFN4-202ENST00000393952 GNAI3P08754 354 aa30.54■■■□□ 2.48
LRFN4-202ENST00000393952 BAG6P46379 1132 aa30.54■■■□□ 2.48
LRFN4-202ENST00000393952 ISCA1Q9BUE6 129 aa30.54■■■□□ 2.48
LRFN4-202ENST00000393952 C4AP0C0L4 1744 aa30.54■■■□□ 2.48
LRFN4-202ENST00000393952 PHF14O94880 888 aa30.54■■■□□ 2.48
LRFN4-202ENST00000393952 GCKRQ14397 625 aa30.54■■■□□ 2.48
LRFN4-202ENST00000393952 SCN7AQ01118 1682 aa30.53■■■□□ 2.48
LRFN4-202ENST00000393952 IBTKQ9P2D0 1353 aaPredicted RBP30.53■■■□□ 2.48
LRFN4-202ENST00000393952 DEFB132Q7Z7B7 95 aa30.53■■■□□ 2.48
LRFN4-202ENST00000393952 ARHGEF1Q92888 912 aaKnown RBP30.53■■■□□ 2.48
LRFN4-202ENST00000393952 ZNF827Q17R98 1081 aa30.52■■■□□ 2.48
LRFN4-202ENST00000393952 HSP90AB3PQ58FF7 597 aa30.52■■■□□ 2.48
LRFN4-202ENST00000393952 C9orf78Q9NZ63 289 aaPredicted RBP30.52■■■□□ 2.48
LRFN4-202ENST00000393952 NBPF7P0C2Y1 421 aaPredicted RBP30.51■■■□□ 2.47
LRFN4-202ENST00000393952 UBTFL1P0CB47 393 aaPredicted RBP30.51■■■□□ 2.47
LRFN4-202ENST00000393952 TRAPPC3LQ5T215 181 aa30.51■■■□□ 2.47
LRFN4-202ENST00000393952 GRM8O00222 908 aa30.5■■■□□ 2.47
LRFN4-202ENST00000393952 AKT1S1Q96B36 256 aa30.5■■■□□ 2.47
LRFN4-202ENST00000393952 CWC25Q9NXE8 425 aaPredicted RBP30.5■■■□□ 2.47
LRFN4-202ENST00000393952 NARFQ9UHQ1 456 aa30.5■■■□□ 2.47
LRFN4-202ENST00000393952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.49■■■□□ 2.47
LRFN4-202ENST00000393952 GPTP24298 496 aa30.49■■■□□ 2.47
LRFN4-202ENST00000393952 CCDC191Q8NCU4 936 aa30.49■■■□□ 2.47
LRFN4-202ENST00000393952 SRP68Q9UHB9 627 aaKnown RBP30.49■■■□□ 2.47
LRFN4-202ENST00000393952 TUBGCP6Q96RT7 1819 aa30.49■■■□□ 2.47
LRFN4-202ENST00000393952 GNAI2P04899 355 aa30.49■■■□□ 2.47
LRFN4-202ENST00000393952 ADRA2BP18089 450 aa30.49■■■□□ 2.47
LRFN4-202ENST00000393952 TRIM28Q13263 835 aaKnown RBP30.49■■■□□ 2.47
LRFN4-202ENST00000393952 CCDC125Q86Z20 511 aa30.49■■■□□ 2.47
LRFN4-202ENST00000393952 UTYO14607 1347 aa30.48■■■□□ 2.47
LRFN4-202ENST00000393952 SSFA2P28290 1259 aa30.48■■■□□ 2.47
LRFN4-202ENST00000393952 USPL1Q5W0Q7 1092 aa30.47■■■□□ 2.47
LRFN4-202ENST00000393952 LRRFIP2Q9Y608 721 aaKnown RBP30.47■■■□□ 2.47
LRFN4-202ENST00000393952 ZPR1O75312 459 aa30.46■■■□□ 2.47
LRFN4-202ENST00000393952 RFC4P35249 363 aa30.46■■■□□ 2.47
LRFN4-202ENST00000393952 ZNF34Q8IZ26 560 aa30.46■■■□□ 2.47
LRFN4-202ENST00000393952 ZNF652Q9Y2D9 606 aa30.46■■■□□ 2.47
LRFN4-202ENST00000393952 JARID2Q92833 1246 aaPredicted RBP30.45■■■□□ 2.47
LRFN4-202ENST00000393952 BCL2L12Q9HB09 334 aa30.45■■■□□ 2.47
LRFN4-202ENST00000393952 TFCP2L1Q9NZI6 479 aa30.45■■■□□ 2.47
LRFN4-202ENST00000393952 USP42Q9H9J4 1324 aaKnown RBP30.45■■■□□ 2.47
LRFN4-202ENST00000393952 CLEC4GQ6UXB4 293 aa30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms