RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 NARFQ9UHQ1 456 aa24.03■■□□□ 1.44
SMN2-202ENST00000380742 USP42Q9H9J4 1324 aaKnown RBP24.02■■□□□ 1.44
SMN2-202ENST00000380742 CAMTA2O94983 1202 aa24.02■■□□□ 1.44
SMN2-202ENST00000380742 KIF6Q6ZMV9 814 aa24.02■■□□□ 1.44
SMN2-202ENST00000380742 ANKRD36CQ5JPF3 1778 aa24.01■■□□□ 1.43
SMN2-202ENST00000380742 MAP3K15Q6ZN16 1313 aa24.01■■□□□ 1.43
SMN2-202ENST00000380742 MSH5O43196 834 aa24.01■■□□□ 1.43
SMN2-202ENST00000380742 ANKRD13DQ6ZTN6 518 aa24.01■■□□□ 1.43
SMN2-202ENST00000380742 ZBTB3Q9H5J0 574 aa24.01■■□□□ 1.43
SMN2-202ENST00000380742 NOB1Q9ULX3 412 aaKnown RBP24.01■■□□□ 1.43
SMN2-202ENST00000380742 PSDA5PKW4 1024 aaPredicted RBP24■■□□□ 1.43
SMN2-202ENST00000380742 FKBP5Q13451 457 aaPredicted RBP24■■□□□ 1.43
SMN2-202ENST00000380742 USPL1Q5W0Q7 1092 aa24■■□□□ 1.43
SMN2-202ENST00000380742 ADCY9O60503 1353 aa23.99■■□□□ 1.43
SMN2-202ENST00000380742 ZPR1O75312 459 aa23.99■■□□□ 1.43
SMN2-202ENST00000380742 HLFQ16534 295 aa23.99■■□□□ 1.43
SMN2-202ENST00000380742 PLBD2Q8NHP8 589 aa23.99■■□□□ 1.43
SMN2-202ENST00000380742 BCL2L12Q9HB09 334 aa23.99■■□□□ 1.43
SMN2-202ENST00000380742 ERVV-1B6SEH8 477 aa23.98■■□□□ 1.43
SMN2-202ENST00000380742 PTPRCP08575 1304 aa23.98■■□□□ 1.43
SMN2-202ENST00000380742 KIF16BQ96L93 1317 aa23.98■■□□□ 1.43
SMN2-202ENST00000380742 PI4KAP2A4QPH2 592 aa23.97■■□□□ 1.43
SMN2-202ENST00000380742 DDX58O95786 925 aaKnown RBP23.97■■□□□ 1.43
SMN2-202ENST00000380742 KSR2Q6VAB6 950 aa23.97■■□□□ 1.43
SMN2-202ENST00000380742 PI4KAP1Q8N8J0 262 aa23.97■■□□□ 1.43
SMN2-202ENST00000380742 GYS1P13807 737 aa23.96■■□□□ 1.43
SMN2-202ENST00000380742 RIC3Q7Z5B4 369 aa23.96■■□□□ 1.43
SMN2-202ENST00000380742 FRAT1Q92837 279 aaPredicted RBP23.96■■□□□ 1.43
SMN2-202ENST00000380742 MAP3K2Q9Y2U5 619 aa23.96■■□□□ 1.43
SMN2-202ENST00000380742 AFDNP55196 1824 aaKnown RBP23.96■■□□□ 1.43
SMN2-202ENST00000380742 F6X3S4 739 aa23.95■■□□□ 1.42
SMN2-202ENST00000380742 GIGYF2Q6Y7W6 1299 aaKnown RBP23.95■■□□□ 1.42
SMN2-202ENST00000380742 FKBP8Q14318 412 aa23.94■■□□□ 1.42
SMN2-202ENST00000380742 ARHGAP45Q92619 1136 aa23.94■■□□□ 1.42
SMN2-202ENST00000380742 COL24A1Q17RW2 1714 aa23.94■■□□□ 1.42
SMN2-202ENST00000380742 N4BP2Q86UW6 1770 aaPredicted RBP23.94■■□□□ 1.42
SMN2-202ENST00000380742 RGL2O15211 777 aa23.93■■□□□ 1.42
SMN2-202ENST00000380742 CLEC4GQ6UXB4 293 aa23.93■■□□□ 1.42
SMN2-202ENST00000380742 TNNQ9UQP3 1299 aa23.93■■□□□ 1.42
SMN2-202ENST00000380742 IPO8O15397 1037 aaKnown RBP23.91■■□□□ 1.42
SMN2-202ENST00000380742 TRIM27P14373 513 aa23.91■■□□□ 1.42
SMN2-202ENST00000380742 ZKSCAN2Q63HK3 967 aa23.91■■□□□ 1.42
SMN2-202ENST00000380742 ATF7IPQ6VMQ6 1270 aa23.91■■□□□ 1.42
SMN2-202ENST00000380742 SLC16A10Q8TF71 515 aa23.91■■□□□ 1.42
SMN2-202ENST00000380742 DNAAF4Q8WXU2 420 aa23.91■■□□□ 1.42
SMN2-202ENST00000380742 METTL22Q9BUU2 404 aaPredicted RBP23.91■■□□□ 1.42
SMN2-202ENST00000380742 ZNF652Q9Y2D9 606 aa23.91■■□□□ 1.42
SMN2-202ENST00000380742 PLIN1O60240 522 aa23.91■■□□□ 1.42
SMN2-202ENST00000380742 TCIRG1Q13488 830 aa23.91■■□□□ 1.42
SMN2-202ENST00000380742 TBC1D9BQ66K14 1250 aa23.91■■□□□ 1.42
SMN2-202ENST00000380742 MSL1Q68DK7 614 aa23.91■■□□□ 1.42
SMN2-202ENST00000380742 API5Q9BZZ5 524 aaKnown RBP23.91■■□□□ 1.42
SMN2-202ENST00000380742 ATP10DQ9P241 1426 aa23.9■■□□□ 1.42
SMN2-202ENST00000380742 MYD88Q99836 296 aa23.9■■□□□ 1.42
SMN2-202ENST00000380742 HSP90AB3PQ58FF7 597 aa23.89■■□□□ 1.41
SMN2-202ENST00000380742 ZNF34Q8IZ26 560 aa23.89■■□□□ 1.41
SMN2-202ENST00000380742 NLGN1Q8N2Q7 840 aa23.89■■□□□ 1.41
SMN2-202ENST00000380742 PXDNLA1KZ92 1463 aa23.88■■□□□ 1.41
SMN2-202ENST00000380742 ATP5J2-PTCD1G3V325 749 aa23.88■■□□□ 1.41
SMN2-202ENST00000380742 ZBTB7AO95365 584 aa23.88■■□□□ 1.41
SMN2-202ENST00000380742 CENPBP07199 599 aaPredicted RBP23.88■■□□□ 1.41
SMN2-202ENST00000380742 TM4SF1P30408 202 aa23.88■■□□□ 1.41
SMN2-202ENST00000380742 NFIXQ14938 502 aa23.88■■□□□ 1.41
SMN2-202ENST00000380742 SLC4A10Q6U841 1118 aa23.88■■□□□ 1.41
SMN2-202ENST00000380742 BICDL1Q6ZP65 573 aa23.88■■□□□ 1.41
SMN2-202ENST00000380742 ISCA1Q9BUE6 129 aa23.88■■□□□ 1.41
SMN2-202ENST00000380742 IGKV5-2P06315 115 aa23.87■■□□□ 1.41
SMN2-202ENST00000380742 GPTP24298 496 aa23.87■■□□□ 1.41
SMN2-202ENST00000380742 CLUAP1Q96AJ1 413 aa23.87■■□□□ 1.41
SMN2-202ENST00000380742 NIP7Q9Y221 180 aaKnown RBP eCLIP23.87■■□□□ 1.41
SMN2-202ENST00000380742 ABCC4O15439 1325 aa23.86■■□□□ 1.41
SMN2-202ENST00000380742 UBN2Q6ZU65 1347 aa23.86■■□□□ 1.41
SMN2-202ENST00000380742 RRP1P56182 461 aaKnown RBP23.86■■□□□ 1.41
SMN2-202ENST00000380742 BEND3Q5T5X7 828 aa23.86■■□□□ 1.41
SMN2-202ENST00000380742 MTFR1LQ9H019 292 aa23.86■■□□□ 1.41
SMN2-202ENST00000380742 NEXNQ0ZGT2 675 aa23.85■■□□□ 1.41
SMN2-202ENST00000380742 CWF19L2Q2TBE0 894 aaKnown RBP23.85■■□□□ 1.41
SMN2-202ENST00000380742 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.85■■□□□ 1.41
SMN2-202ENST00000380742 SUPT16HQ9Y5B9 1047 aaKnown RBP23.85■■□□□ 1.41
SMN2-202ENST00000380742 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
SMN2-202ENST00000380742 DDR1Q08345 913 aa23.84■■□□□ 1.41
SMN2-202ENST00000380742 LINS1Q8NG48 757 aa23.84■■□□□ 1.41
SMN2-202ENST00000380742 SETDB2Q96T68 719 aa23.84■■□□□ 1.41
SMN2-202ENST00000380742 ATF5Q9Y2D1 282 aaPredicted RBP23.84■■□□□ 1.41
SMN2-202ENST00000380742 NRXN2Q9P2S2 1712 aa23.84■■□□□ 1.41
SMN2-202ENST00000380742 NEURL1BA8MQ27 555 aa23.83■■□□□ 1.41
SMN2-202ENST00000380742 RLBP1P12271 317 aa23.83■■□□□ 1.41
SMN2-202ENST00000380742 TRIM28Q13263 835 aaKnown RBP23.83■■□□□ 1.41
SMN2-202ENST00000380742 NLRP10Q86W26 655 aa23.83■■□□□ 1.41
SMN2-202ENST00000380742 DZIP1LQ8IYY4 767 aaKnown RBP23.83■■□□□ 1.41
SMN2-202ENST00000380742 MMP10P09238 476 aa23.82■■□□□ 1.4
SMN2-202ENST00000380742 CARMIL3Q8ND23 1372 aa23.82■■□□□ 1.4
SMN2-202ENST00000380742 POLRMTO00411 1230 aaKnown RBP23.81■■□□□ 1.4
SMN2-202ENST00000380742 C20orf194Q5TEA3 1177 aa23.81■■□□□ 1.4
SMN2-202ENST00000380742 SUSD4Q5VX71 490 aa23.81■■□□□ 1.4
SMN2-202ENST00000380742 PANK1Q8TE04 598 aa23.81■■□□□ 1.4
SMN2-202ENST00000380742 SRCIN1Q9C0H9 1055 aa23.81■■□□□ 1.4
SMN2-202ENST00000380742 FAM177BA6PVY3 158 aa23.8■■□□□ 1.4
SMN2-202ENST00000380742 CCT4P50991 539 aaKnown RBP23.8■■□□□ 1.4
SMN2-202ENST00000380742 PARP10Q53GL7 1025 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms