RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 DDX46Q7L014 1031 aaKnown RBP21.02■□□□□ 0.96
UBL3-201ENST00000380680 LRP2BPQ9P2M1 347 aa21.02■□□□□ 0.96
UBL3-201ENST00000380680 SPC24Q8NBT2 197 aa21.02■□□□□ 0.96
UBL3-201ENST00000380680 NAT10Q9H0A0 1025 aaKnown RBP21.02■□□□□ 0.96
UBL3-201ENST00000380680 FAM13BQ9NYF5 915 aa21.02■□□□□ 0.96
UBL3-201ENST00000380680 USP19O94966 1318 aa21.02■□□□□ 0.95
UBL3-201ENST00000380680 TCEANC2Q96MN5 208 aa21.01■□□□□ 0.95
UBL3-201ENST00000380680 USP26Q9BXU7 913 aa21.01■□□□□ 0.95
UBL3-201ENST00000380680 LDHAL6AQ6ZMR3 332 aa21.01■□□□□ 0.95
UBL3-201ENST00000380680 TPM3P06753 285 aa21.01■□□□□ 0.95
UBL3-201ENST00000380680 IGHMBP2P38935 993 aaKnown RBP21.01■□□□□ 0.95
UBL3-201ENST00000380680 TDO2P48775 406 aa21.01■□□□□ 0.95
UBL3-201ENST00000380680 AIDAQ96BJ3 306 aa21.01■□□□□ 0.95
UBL3-201ENST00000380680 CFAP45Q9UL16 551 aa21.01■□□□□ 0.95
UBL3-201ENST00000380680 ROBO2Q9HCK4 1378 aa21.01■□□□□ 0.95
UBL3-201ENST00000380680 PNMA6EA0A0J9YXQ4 647 aa21■□□□□ 0.95
UBL3-201ENST00000380680 IL17REQ8NFR9 667 aa21■□□□□ 0.95
UBL3-201ENST00000380680 DDX21Q9NR30 783 aaKnown RBP eCLIP21■□□□□ 0.95
UBL3-201ENST00000380680 RBM25P49756 843 aaKnown RBP21■□□□□ 0.95
UBL3-201ENST00000380680 ABCC4O15439 1325 aa21■□□□□ 0.95
UBL3-201ENST00000380680 PDIA4P13667 645 aaKnown RBP20.99■□□□□ 0.95
UBL3-201ENST00000380680 CHMLP26374 656 aa20.99■□□□□ 0.95
UBL3-201ENST00000380680 NUP62CLQ9H1M0 184 aa20.99■□□□□ 0.95
UBL3-201ENST00000380680 TSPOAP1O95153 1857 aa20.99■□□□□ 0.95
UBL3-201ENST00000380680 ANAPC15P60006 121 aa20.99■□□□□ 0.95
UBL3-201ENST00000380680 STX6O43752 255 aa20.99■□□□□ 0.95
UBL3-201ENST00000380680 NUP133Q8WUM0 1156 aa20.99■□□□□ 0.95
UBL3-201ENST00000380680 BABAM1Q9NWV8 329 aa20.99■□□□□ 0.95
UBL3-201ENST00000380680 RNF17Q9BXT8 1623 aaKnown RBP20.99■□□□□ 0.95
UBL3-201ENST00000380680 CLSTN1O94985 981 aa20.99■□□□□ 0.95
UBL3-201ENST00000380680 RAI14Q9P0K7 980 aa20.99■□□□□ 0.95
UBL3-201ENST00000380680 HSP90AB3PQ58FF7 597 aa20.98■□□□□ 0.95
UBL3-201ENST00000380680 TRIM22Q8IYM9 498 aa20.98■□□□□ 0.95
UBL3-201ENST00000380680 AATKQ6ZMQ8 1374 aa20.98■□□□□ 0.95
UBL3-201ENST00000380680 BRMS1Q9HCU9 246 aa20.98■□□□□ 0.95
UBL3-201ENST00000380680 FAM135BQ49AJ0 1406 aa20.98■□□□□ 0.95
UBL3-201ENST00000380680 NBPF7P0C2Y1 421 aaPredicted RBP20.98■□□□□ 0.95
UBL3-201ENST00000380680 GJB2P29033 226 aa20.98■□□□□ 0.95
UBL3-201ENST00000380680 TEX13AQ9BXU3 409 aaPredicted RBP20.98■□□□□ 0.95
UBL3-201ENST00000380680 KIAA0232Q92628 1395 aa20.98■□□□□ 0.95
UBL3-201ENST00000380680 ARHGAP31Q2M1Z3 1444 aa20.97■□□□□ 0.95
UBL3-201ENST00000380680 CCDC69A6NI79 296 aa20.97■□□□□ 0.95
UBL3-201ENST00000380680 KLHL40Q2TBA0 621 aa20.97■□□□□ 0.95
UBL3-201ENST00000380680 DCAF5Q96JK2 942 aa20.97■□□□□ 0.95
UBL3-201ENST00000380680 RBM8AQ9Y5S9 174 aaKnown RBP20.97■□□□□ 0.95
UBL3-201ENST00000380680 SPHKAPQ2M3C7 1700 aa20.97■□□□□ 0.95
UBL3-201ENST00000380680 ANKRD18BA2A2Z9 1011 aa20.97■□□□□ 0.95
UBL3-201ENST00000380680 ZNF790Q6PG37 636 aa20.97■□□□□ 0.95
UBL3-201ENST00000380680 HOMER1Q86YM7 354 aa20.97■□□□□ 0.95
UBL3-201ENST00000380680 ZGPATQ8N5A5 531 aaKnown RBP20.97■□□□□ 0.95
UBL3-201ENST00000380680 TPM1P09493 284 aa20.97■□□□□ 0.95
UBL3-201ENST00000380680 CAMK4Q16566 473 aa20.96■□□□□ 0.95
UBL3-201ENST00000380680 NECAB1Q8N987 351 aa20.96■□□□□ 0.95
UBL3-201ENST00000380680 TFIP11Q9UBB9 837 aaKnown RBP20.96■□□□□ 0.95
UBL3-201ENST00000380680 JMYQ8N9B5 988 aa20.96■□□□□ 0.95
UBL3-201ENST00000380680 ARHGEF10O15013 1369 aa20.96■□□□□ 0.95
UBL3-201ENST00000380680 GUCY1B3Q02153 619 aa20.96■□□□□ 0.95
UBL3-201ENST00000380680 RBM27Q9P2N5 1060 aaKnown RBP20.96■□□□□ 0.95
UBL3-201ENST00000380680 CCT2P78371 535 aaKnown RBP20.95■□□□□ 0.94
UBL3-201ENST00000380680 OLFM4Q6UX06 510 aa20.95■□□□□ 0.94
UBL3-201ENST00000380680 TRIM34Q9BYJ4 488 aa20.95■□□□□ 0.94
UBL3-201ENST00000380680 ATP7BP35670 1465 aa20.95■□□□□ 0.94
UBL3-201ENST00000380680 TSR1Q2NL82 804 aaKnown RBP20.95■□□□□ 0.94
UBL3-201ENST00000380680 DDX17Q92841 729 aaKnown RBP20.95■□□□□ 0.94
UBL3-201ENST00000380680 PPFIA3O75145 1194 aa20.95■□□□□ 0.94
UBL3-201ENST00000380680 HOXB7P09629 217 aa20.95■□□□□ 0.94
UBL3-201ENST00000380680 SCAND2PQ9GZW5 306 aaPredicted RBP20.95■□□□□ 0.94
UBL3-201ENST00000380680 BICC1Q9H694 974 aaKnown RBP20.95■□□□□ 0.94
UBL3-201ENST00000380680 HMGB1P09429 215 aaKnown RBP20.94■□□□□ 0.94
UBL3-201ENST00000380680 NEK1Q96PY6 1258 aa20.94■□□□□ 0.94
UBL3-201ENST00000380680 E9PCH4 1651 aa20.94■□□□□ 0.94
UBL3-201ENST00000380680 EIF4A1P60842 406 aaKnown RBP20.94■□□□□ 0.94
UBL3-201ENST00000380680 HAND2P61296 217 aa20.94■□□□□ 0.94
UBL3-201ENST00000380680 CCAR2Q8N163 923 aaKnown RBP20.94■□□□□ 0.94
UBL3-201ENST00000380680 UBAC1Q9BSL1 405 aa20.94■□□□□ 0.94
UBL3-201ENST00000380680 TTC41PQ6P2S7 1318 aa20.93■□□□□ 0.94
UBL3-201ENST00000380680 MADDQ8WXG6 1647 aa20.93■□□□□ 0.94
UBL3-201ENST00000380680 SLC3A2P08195 630 aaKnown RBP20.93■□□□□ 0.94
UBL3-201ENST00000380680 MAP3K11Q16584 847 aa20.93■□□□□ 0.94
UBL3-201ENST00000380680 KCNQ3O43525 872 aa20.93■□□□□ 0.94
UBL3-201ENST00000380680 RAB3GAP1Q15042 981 aa20.93■□□□□ 0.94
UBL3-201ENST00000380680 ANKRD20A12PQ8NF67 263 aa20.93■□□□□ 0.94
UBL3-201ENST00000380680 ZNF213O14771 459 aa20.92■□□□□ 0.94
UBL3-201ENST00000380680 CDKL5O76039 1030 aa20.92■□□□□ 0.94
UBL3-201ENST00000380680 IL2RBP14784 551 aa20.92■□□□□ 0.94
UBL3-201ENST00000380680 PLEKHG1Q9ULL1 1385 aa20.92■□□□□ 0.94
UBL3-201ENST00000380680 NAPBQ9H115 298 aa20.92■□□□□ 0.94
UBL3-201ENST00000380680 SMC2O95347 1197 aa20.92■□□□□ 0.94
UBL3-201ENST00000380680 CCDC183Q5T5S1 534 aa20.92■□□□□ 0.94
UBL3-201ENST00000380680 BCL11BQ9C0K0 894 aaPredicted RBP20.92■□□□□ 0.94
UBL3-201ENST00000380680 ZNF652Q9Y2D9 606 aa20.92■□□□□ 0.94
UBL3-201ENST00000380680 USP44Q9H0E7 712 aa20.91■□□□□ 0.94
UBL3-201ENST00000380680 NMIQ13287 307 aaPredicted RBP20.91■□□□□ 0.94
UBL3-201ENST00000380680 LRRC2Q9BYS8 371 aa20.91■□□□□ 0.94
UBL3-201ENST00000380680 HMG20BQ9P0W2 317 aa20.91■□□□□ 0.94
UBL3-201ENST00000380680 KLHDC4Q8TBB5 520 aa20.91■□□□□ 0.94
UBL3-201ENST00000380680 CCDC47Q96A33 483 aaKnown RBP20.91■□□□□ 0.94
UBL3-201ENST00000380680 RTL1A6NKG5 1358 aa20.91■□□□□ 0.94
UBL3-201ENST00000380680 BRF1Q92994 677 aa20.9■□□□□ 0.94
UBL3-201ENST00000380680 MINDY4BA8MYZ0 360 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms