RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 KDM2BQ8NHM5 1336 aa18.3■□□□□ 0.52
PCNA-202ENST00000379160 ANKRD31Q8N7Z5 1873 aa18.3■□□□□ 0.52
PCNA-202ENST00000379160 PRAMEF22A3QJZ6 481 aa18.3■□□□□ 0.52
PCNA-202ENST00000379160 DCTN1Q14203 1278 aa18.3■□□□□ 0.52
PCNA-202ENST00000379160 C16orf71Q8IYS4 520 aaPredicted RBP18.3■□□□□ 0.52
PCNA-202ENST00000379160 PRR29P0C7W0 189 aa18.29■□□□□ 0.52
PCNA-202ENST00000379160 PRR5LQ6MZQ0 368 aa18.29■□□□□ 0.52
PCNA-202ENST00000379160 RRAGCQ9HB90 399 aa18.29■□□□□ 0.52
PCNA-202ENST00000379160 CAMTA2O94983 1202 aa18.28■□□□□ 0.52
PCNA-202ENST00000379160 APLP1P51693 650 aa18.28■□□□□ 0.52
PCNA-202ENST00000379160 DZIP3Q86Y13 1208 aaKnown RBP18.28■□□□□ 0.52
PCNA-202ENST00000379160 ZNF622Q969S3 477 aaKnown RBP eCLIP18.28■□□□□ 0.52
PCNA-202ENST00000379160 SETDB2Q96T68 719 aa18.28■□□□□ 0.52
PCNA-202ENST00000379160 CCDC88AQ3V6T2 1871 aa18.27■□□□□ 0.52
PCNA-202ENST00000379160 NPHP1O15259 732 aa18.27■□□□□ 0.51
PCNA-202ENST00000379160 LMNB1P20700 586 aa18.27■□□□□ 0.51
PCNA-202ENST00000379160 PDE6BP35913 854 aa18.27■□□□□ 0.51
PCNA-202ENST00000379160 PRELPP51888 382 aa18.27■□□□□ 0.51
PCNA-202ENST00000379160 BRIP1Q9BX63 1249 aa18.27■□□□□ 0.51
PCNA-202ENST00000379160 SNRPA1P09661 255 aaKnown RBP18.26■□□□□ 0.51
PCNA-202ENST00000379160 RBM46Q8TBY0 533 aaKnown RBP18.26■□□□□ 0.51
PCNA-202ENST00000379160 BCORQ6W2J9 1755 aa18.26■□□□□ 0.51
PCNA-202ENST00000379160 COL11A2P13942 1736 aaPredicted RBP18.25■□□□□ 0.51
PCNA-202ENST00000379160 CHRDL2Q6WN34 429 aa18.25■□□□□ 0.51
PCNA-202ENST00000379160 CNBD1Q8NA66 436 aa18.25■□□□□ 0.51
PCNA-202ENST00000379160 TNRC6CQ9HCJ0 1690 aaKnown RBP18.25■□□□□ 0.51
PCNA-202ENST00000379160 NFKBIEO00221 500 aa18.24■□□□□ 0.51
PCNA-202ENST00000379160 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
PCNA-202ENST00000379160 C21orf2O43822 256 aa18.24■□□□□ 0.51
PCNA-202ENST00000379160 MIS18AQ9NYP9 233 aa18.24■□□□□ 0.51
PCNA-202ENST00000379160 PDZRN3Q9UPQ7 1066 aa18.24■□□□□ 0.51
PCNA-202ENST00000379160 ST5P78524 1137 aa18.23■□□□□ 0.51
PCNA-202ENST00000379160 ZC3H4Q9UPT8 1303 aaKnown RBP18.23■□□□□ 0.51
PCNA-202ENST00000379160 TIAM2Q8IVF5 1701 aa18.22■□□□□ 0.51
PCNA-202ENST00000379160 TAF7Q15545 349 aaPredicted RBP18.22■□□□□ 0.51
PCNA-202ENST00000379160 CACNA1SQ13698 1873 aa18.22■□□□□ 0.51
PCNA-202ENST00000379160 DLG5Q8TDM6 1919 aa18.22■□□□□ 0.51
PCNA-202ENST00000379160 NBPF26B4DH59 902 aa18.21■□□□□ 0.51
PCNA-202ENST00000379160 NEFMP07197 916 aa18.21■□□□□ 0.51
PCNA-202ENST00000379160 NBPF10Q6P3W6 841 aaKnown RBP18.21■□□□□ 0.51
PCNA-202ENST00000379160 NBPF5PQ86XG9 351 aaPredicted RBP18.21■□□□□ 0.51
PCNA-202ENST00000379160 NBPF15Q8N660 670 aa18.21■□□□□ 0.51
PCNA-202ENST00000379160 WDR90Q96KV7 1748 aa18.2■□□□□ 0.5
PCNA-202ENST00000379160 GLTPD2A6NH11 291 aa18.2■□□□□ 0.5
PCNA-202ENST00000379160 HTRA3P83110 453 aa18.2■□□□□ 0.5
PCNA-202ENST00000379160 FSTL1Q12841 308 aa18.2■□□□□ 0.5
PCNA-202ENST00000379160 CLEC4GQ6UXB4 293 aa18.2■□□□□ 0.5
PCNA-202ENST00000379160 DNAJC5GQ8N7S2 189 aa18.2■□□□□ 0.5
PCNA-202ENST00000379160 ZNF652Q9Y2D9 606 aa18.2■□□□□ 0.5
PCNA-202ENST00000379160 SRGNP10124 158 aa18.19■□□□□ 0.5
PCNA-202ENST00000379160 FER1L6Q2WGJ9 1857 aa18.19■□□□□ 0.5
PCNA-202ENST00000379160 SLX4Q8IY92 1834 aa18.19■□□□□ 0.5
PCNA-202ENST00000379160 STYK1Q6J9G0 422 aa18.18■□□□□ 0.5
PCNA-202ENST00000379160 PRPF40BQ6NWY9 871 aaKnown RBP18.18■□□□□ 0.5
PCNA-202ENST00000379160 CNKSR1Q969H4 720 aa18.18■□□□□ 0.5
PCNA-202ENST00000379160 FAM177BA6PVY3 158 aa18.17■□□□□ 0.5
PCNA-202ENST00000379160 VEGFAP15692 232 aaPredicted RBP18.17■□□□□ 0.5
PCNA-202ENST00000379160 ERFEQ4G0M1 354 aa18.17■□□□□ 0.5
PCNA-202ENST00000379160 SMC1BQ8NDV3 1235 aa18.17■□□□□ 0.5
PCNA-202ENST00000379160 MASTLQ96GX5 879 aa18.17■□□□□ 0.5
PCNA-202ENST00000379160 PLEKHF1Q96S99 279 aa18.17■□□□□ 0.5
PCNA-202ENST00000379160 NIP7Q9Y221 180 aaKnown RBP eCLIP18.17■□□□□ 0.5
PCNA-202ENST00000379160 VASPP50552 380 aaPredicted RBP18.17■□□□□ 0.5
PCNA-202ENST00000379160 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
PCNA-202ENST00000379160 THUMPD2Q9BTF0 503 aaKnown RBP18.17■□□□□ 0.5
PCNA-202ENST00000379160 TAOK3Q9H2K8 898 aa18.17■□□□□ 0.5
PCNA-202ENST00000379160 LAMB4A4D0S4 1761 aa18.16■□□□□ 0.5
PCNA-202ENST00000379160 DICER1Q9UPY3 1922 aaKnown RBP18.16■□□□□ 0.5
PCNA-202ENST00000379160 KDM3BQ7LBC6 1761 aa18.16■□□□□ 0.5
PCNA-202ENST00000379160 HLFQ16534 295 aa18.16■□□□□ 0.5
PCNA-202ENST00000379160 DPY19L2Q6NUT2 758 aa18.16■□□□□ 0.5
PCNA-202ENST00000379160 TPTE2Q6XPS3 522 aa18.16■□□□□ 0.5
PCNA-202ENST00000379160 NGEFQ8N5V2 710 aa18.16■□□□□ 0.5
PCNA-202ENST00000379160 ARFGEF2Q9Y6D5 1785 aa18.15■□□□□ 0.5
PCNA-202ENST00000379160 NFE2L2Q16236 605 aa18.15■□□□□ 0.5
PCNA-202ENST00000379160 PNISRQ8TF01 805 aaKnown RBP18.15■□□□□ 0.5
PCNA-202ENST00000379160 MAPK8IP3Q9UPT6 1336 aa18.14■□□□□ 0.49
PCNA-202ENST00000379160 PCNTO95613 3336 aa18.13■□□□□ 0.49
PCNA-202ENST00000379160 LTBP3Q9NS15 1303 aa18.13■□□□□ 0.49
PCNA-202ENST00000379160 POTECB2RU33 542 aa18.13■□□□□ 0.49
PCNA-202ENST00000379160 NPR1P16066 1061 aa18.13■□□□□ 0.49
PCNA-202ENST00000379160 EIF4A1P60842 406 aaKnown RBP18.13■□□□□ 0.49
PCNA-202ENST00000379160 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
PCNA-202ENST00000379160 RRP7AQ9Y3A4 280 aaKnown RBP18.13■□□□□ 0.49
PCNA-202ENST00000379160 RGL2O15211 777 aa18.12■□□□□ 0.49
PCNA-202ENST00000379160 GTF2E1P29083 439 aaPredicted RBP18.12■□□□□ 0.49
PCNA-202ENST00000379160 KLRG1Q96E93 195 aa18.12■□□□□ 0.49
PCNA-202ENST00000379160 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
PCNA-202ENST00000379160 MYL6BP14649 208 aa18.11■□□□□ 0.49
PCNA-202ENST00000379160 KLRG2A4D1S0 409 aaPredicted RBP18.1■□□□□ 0.49
PCNA-202ENST00000379160 CCDC93Q567U6 631 aa18.1■□□□□ 0.49
PCNA-202ENST00000379160 OLFM4Q6UX06 510 aa18.1■□□□□ 0.49
PCNA-202ENST00000379160 C7orf43Q8WVR3 580 aa18.1■□□□□ 0.49
PCNA-202ENST00000379160 ZBTB47Q9UFB7 747 aaPredicted RBP18.1■□□□□ 0.49
PCNA-202ENST00000379160 NUP98P52948 1817 aa18.1■□□□□ 0.49
PCNA-202ENST00000379160 DDNO94850 711 aaPredicted RBP18.09■□□□□ 0.49
PCNA-202ENST00000379160 KIF6Q6ZMV9 814 aa18.09■□□□□ 0.49
PCNA-202ENST00000379160 TTLL7Q6ZT98 887 aa18.09■□□□□ 0.49
PCNA-202ENST00000379160 ERVV-1B6SEH8 477 aa18.08■□□□□ 0.49
PCNA-202ENST00000379160 FXR2P51116 673 aaKnown RBP eCLIP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms