RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 TTLL7Q6ZT98 887 aa29.25■■■□□ 2.27
YIF1A-202ENST00000376899 MAP3K15Q6ZN16 1313 aa29.24■■■□□ 2.27
YIF1A-202ENST00000376899 ERVV-1B6SEH8 477 aa29.24■■■□□ 2.27
YIF1A-202ENST00000376899 EXOSC9Q06265 439 aaKnown RBP29.24■■■□□ 2.27
YIF1A-202ENST00000376899 SLFN5Q08AF3 891 aa29.24■■■□□ 2.27
YIF1A-202ENST00000376899 FHDC1Q9C0D6 1143 aaPredicted RBP29.24■■■□□ 2.27
YIF1A-202ENST00000376899 POLRMTO00411 1230 aaKnown RBP29.23■■■□□ 2.27
YIF1A-202ENST00000376899 CCDC30Q5VVM6 783 aa29.23■■■□□ 2.27
YIF1A-202ENST00000376899 ZNF652Q9Y2D9 606 aa29.23■■■□□ 2.27
YIF1A-202ENST00000376899 PARP3Q9Y6F1 533 aa29.23■■■□□ 2.27
YIF1A-202ENST00000376899 TBC1D9BQ66K14 1250 aa29.22■■■□□ 2.27
YIF1A-202ENST00000376899 KIF6Q6ZMV9 814 aa29.22■■■□□ 2.27
YIF1A-202ENST00000376899 HYPKQ9NX55 129 aa29.22■■■□□ 2.27
YIF1A-202ENST00000376899 CACNA1FO60840 1977 aa29.22■■■□□ 2.27
YIF1A-202ENST00000376899 C10orf71Q711Q0 1435 aa29.21■■■□□ 2.27
YIF1A-202ENST00000376899 VAMP4O75379 141 aa29.2■■■□□ 2.26
YIF1A-202ENST00000376899 HNRNPUQ00839 825 aaKnown RBP eCLIP29.2■■■□□ 2.26
YIF1A-202ENST00000376899 HLFQ16534 295 aa29.2■■■□□ 2.26
YIF1A-202ENST00000376899 COPS6Q7L5N1 327 aa29.2■■■□□ 2.26
YIF1A-202ENST00000376899 TRMT2AQ8IZ69 625 aaKnown RBP29.2■■■□□ 2.26
YIF1A-202ENST00000376899 XAGE3Q8WTP9 111 aa29.2■■■□□ 2.26
YIF1A-202ENST00000376899 SYT17Q9BSW7 474 aa29.2■■■□□ 2.26
YIF1A-202ENST00000376899 CDCA7LQ96GN5 454 aa29.19■■■□□ 2.26
YIF1A-202ENST00000376899 CD2APQ9Y5K6 639 aa29.19■■■□□ 2.26
YIF1A-202ENST00000376899 ATP10DQ9P241 1426 aa29.19■■■□□ 2.26
YIF1A-202ENST00000376899 ANKRD36CQ5JPF3 1778 aa29.18■■■□□ 2.26
YIF1A-202ENST00000376899 CARMIL3Q8ND23 1372 aa29.18■■■□□ 2.26
YIF1A-202ENST00000376899 ZBTB3Q9H5J0 574 aa29.17■■■□□ 2.26
YIF1A-202ENST00000376899 KIAA1551Q9HCM1 1747 aa29.17■■■□□ 2.26
YIF1A-202ENST00000376899 GIGYF2Q6Y7W6 1299 aaKnown RBP29.16■■■□□ 2.26
YIF1A-202ENST00000376899 BICDL1Q6ZP65 573 aa29.16■■■□□ 2.26
YIF1A-202ENST00000376899 SERPINB2P05120 415 aa29.15■■■□□ 2.26
YIF1A-202ENST00000376899 AIMP1Q12904 312 aaKnown RBP29.15■■■□□ 2.26
YIF1A-202ENST00000376899 SETDB2Q96T68 719 aa29.15■■■□□ 2.26
YIF1A-202ENST00000376899 ARFGEF2Q9Y6D5 1785 aa29.15■■■□□ 2.26
YIF1A-202ENST00000376899 STK31Q9BXU1 1019 aa29.14■■■□□ 2.26
YIF1A-202ENST00000376899 KLHL34Q8N239 644 aa29.13■■■□□ 2.25
YIF1A-202ENST00000376899 PHAXQ9H814 394 aaKnown RBP29.13■■■□□ 2.25
YIF1A-202ENST00000376899 NIP7Q9Y221 180 aaKnown RBP eCLIP29.12■■■□□ 2.25
YIF1A-202ENST00000376899 ZBED9Q6R2W3 1325 aa29.12■■■□□ 2.25
YIF1A-202ENST00000376899 NLGN2Q8NFZ4 835 aa29.11■■■□□ 2.25
YIF1A-202ENST00000376899 PLBD2Q8NHP8 589 aa29.11■■■□□ 2.25
YIF1A-202ENST00000376899 ZNF34Q8IZ26 560 aa29.1■■■□□ 2.25
YIF1A-202ENST00000376899 ANKRD31Q8N7Z5 1873 aa29.1■■■□□ 2.25
YIF1A-202ENST00000376899 TCERG1O14776 1098 aaKnown RBP29.09■■■□□ 2.25
YIF1A-202ENST00000376899 ANKRD13DQ6ZTN6 518 aa29.09■■■□□ 2.25
YIF1A-202ENST00000376899 PXDNLA1KZ92 1463 aa29.09■■■□□ 2.25
YIF1A-202ENST00000376899 HSP90AB3PQ58FF7 597 aa29.08■■■□□ 2.25
YIF1A-202ENST00000376899 UBN2Q6ZU65 1347 aa29.08■■■□□ 2.25
YIF1A-202ENST00000376899 IBTKQ9P2D0 1353 aaPredicted RBP29.08■■■□□ 2.25
YIF1A-202ENST00000376899 N4BP2Q86UW6 1770 aaPredicted RBP29.08■■■□□ 2.25
YIF1A-202ENST00000376899 SLC4A2P04920 1241 aa29.07■■■□□ 2.24
YIF1A-202ENST00000376899 PRR5LQ6MZQ0 368 aa29.07■■■□□ 2.24
YIF1A-202ENST00000376899 TGFB2P61812 414 aa29.06■■■□□ 2.24
YIF1A-202ENST00000376899 BRCA1P38398 1863 aaKnown RBP29.06■■■□□ 2.24
YIF1A-202ENST00000376899 TCIRG1Q13488 830 aa29.05■■■□□ 2.24
YIF1A-202ENST00000376899 CNBD1Q8NA66 436 aa29.05■■■□□ 2.24
YIF1A-202ENST00000376899 DLEC1Q9Y238 1755 aa29.04■■■□□ 2.24
YIF1A-202ENST00000376899 GPTP24298 496 aa29.04■■■□□ 2.24
YIF1A-202ENST00000376899 PARP10Q53GL7 1025 aa29.04■■■□□ 2.24
YIF1A-202ENST00000376899 G2E3Q7L622 706 aa29.04■■■□□ 2.24
YIF1A-202ENST00000376899 NBPF5PQ86XG9 351 aaPredicted RBP29.04■■■□□ 2.24
YIF1A-202ENST00000376899 ZNF428Q96B54 188 aa29.04■■■□□ 2.24
YIF1A-202ENST00000376899 DDX58O95786 925 aaKnown RBP29.03■■■□□ 2.24
YIF1A-202ENST00000376899 CT47B1P0C2W7 299 aaPredicted RBP29.03■■■□□ 2.24
YIF1A-202ENST00000376899 FLIIQ13045 1269 aa29.02■■■□□ 2.24
YIF1A-202ENST00000376899 ADCY9O60503 1353 aa29.01■■■□□ 2.24
YIF1A-202ENST00000376899 TPTE2Q6XPS3 522 aa29.01■■■□□ 2.23
YIF1A-202ENST00000376899 RIC3Q7Z5B4 369 aa29.01■■■□□ 2.23
YIF1A-202ENST00000376899 ISCA1Q9BUE6 129 aa29.01■■■□□ 2.23
YIF1A-202ENST00000376899 NYXQ9GZU5 481 aa29.01■■■□□ 2.23
YIF1A-202ENST00000376899 NTSR2O95665 410 aa29■■■□□ 2.23
YIF1A-202ENST00000376899 ST5P78524 1137 aa29■■■□□ 2.23
YIF1A-202ENST00000376899 SUSD4Q5VX71 490 aa29■■■□□ 2.23
YIF1A-202ENST00000376899 KSR2Q6VAB6 950 aa29■■■□□ 2.23
YIF1A-202ENST00000376899 NLRP10Q86W26 655 aa29■■■□□ 2.23
YIF1A-202ENST00000376899 BRIP1Q9BX63 1249 aa29■■■□□ 2.23
YIF1A-202ENST00000376899 COL11A2P13942 1736 aaPredicted RBP29■■■□□ 2.23
YIF1A-202ENST00000376899 RIC1Q4ADV7 1423 aa28.99■■■□□ 2.23
YIF1A-202ENST00000376899 TRIM28Q13263 835 aaKnown RBP28.98■■■□□ 2.23
YIF1A-202ENST00000376899 PPP1R42Q7Z4L9 355 aa28.98■■■□□ 2.23
YIF1A-202ENST00000376899 RNF123Q5XPI4 1314 aa28.97■■■□□ 2.23
YIF1A-202ENST00000376899 TNRC6CQ9HCJ0 1690 aaKnown RBP28.97■■■□□ 2.23
YIF1A-202ENST00000376899 PI4KAP2A4QPH2 592 aa28.97■■■□□ 2.23
YIF1A-202ENST00000376899 FAM177BA6PVY3 158 aa28.97■■■□□ 2.23
YIF1A-202ENST00000376899 NPHP1O15259 732 aa28.97■■■□□ 2.23
YIF1A-202ENST00000376899 DPEP1P16444 411 aa28.97■■■□□ 2.23
YIF1A-202ENST00000376899 ALDH1L2Q3SY69 923 aa28.97■■■□□ 2.23
YIF1A-202ENST00000376899 CCDC24Q8N4L8 307 aa28.97■■■□□ 2.23
YIF1A-202ENST00000376899 PI4KAP1Q8N8J0 262 aa28.97■■■□□ 2.23
YIF1A-202ENST00000376899 METTL22Q9BUU2 404 aaPredicted RBP28.97■■■□□ 2.23
YIF1A-202ENST00000376899 MAP3K2Q9Y2U5 619 aa28.97■■■□□ 2.23
YIF1A-202ENST00000376899 A0A0G2JLW4 131 aa28.96■■■□□ 2.23
YIF1A-202ENST00000376899 KCNA3P22001 575 aa28.96■■■□□ 2.23
YIF1A-202ENST00000376899 MRPL50Q8N5N7 158 aaKnown RBP28.96■■■□□ 2.23
YIF1A-202ENST00000376899 PDZRN3Q9UPQ7 1066 aa28.96■■■□□ 2.23
YIF1A-202ENST00000376899 ABCC12Q96J65 1359 aa28.96■■■□□ 2.23
YIF1A-202ENST00000376899 PDE6BP35913 854 aa28.95■■■□□ 2.22
YIF1A-202ENST00000376899 SSH1Q8WYL5 1049 aa28.95■■■□□ 2.22
YIF1A-202ENST00000376899 UTP14AQ9BVJ6 771 aaKnown RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms