RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 LTBP3Q9NS15 1303 aa20.46■□□□□ 0.87
CLCN6-207ENST00000376497 ST5P78524 1137 aa20.45■□□□□ 0.86
CLCN6-207ENST00000376497 STYK1Q6J9G0 422 aa20.45■□□□□ 0.86
CLCN6-207ENST00000376497 RTF1Q92541 710 aaKnown RBP20.45■□□□□ 0.86
CLCN6-207ENST00000376497 ZNF219Q9P2Y4 722 aaPredicted RBP20.45■□□□□ 0.86
CLCN6-207ENST00000376497 PRAMEF22A3QJZ6 481 aa20.44■□□□□ 0.86
CLCN6-207ENST00000376497 SNRPA1P09661 255 aaKnown RBP20.44■□□□□ 0.86
CLCN6-207ENST00000376497 U2AF1L5P0DN76 240 aaPredicted RBP20.44■□□□□ 0.86
CLCN6-207ENST00000376497 SRGNP10124 158 aa20.44■□□□□ 0.86
CLCN6-207ENST00000376497 PPP2R1AP30153 589 aa20.44■□□□□ 0.86
CLCN6-207ENST00000376497 U2AF1Q01081 240 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLCN6-207ENST00000376497 ERFEQ4G0M1 354 aa20.44■□□□□ 0.86
CLCN6-207ENST00000376497 MASTLQ96GX5 879 aa20.44■□□□□ 0.86
CLCN6-207ENST00000376497 NPHP1O15259 732 aa20.43■□□□□ 0.86
CLCN6-207ENST00000376497 HTATSF1O43719 755 aaKnown RBP20.43■□□□□ 0.86
CLCN6-207ENST00000376497 MCM10Q7L590 875 aa20.43■□□□□ 0.86
CLCN6-207ENST00000376497 PIP4K2AP48426 406 aaPredicted RBP20.42■□□□□ 0.86
CLCN6-207ENST00000376497 TAOK3Q9H2K8 898 aa20.42■□□□□ 0.86
CLCN6-207ENST00000376497 RGL2O15211 777 aa20.41■□□□□ 0.86
CLCN6-207ENST00000376497 SOGA3Q5TF21 947 aa20.41■□□□□ 0.86
CLCN6-207ENST00000376497 PRPF40BQ6NWY9 871 aaKnown RBP20.41■□□□□ 0.86
CLCN6-207ENST00000376497 ZNF652Q9Y2D9 606 aa20.41■□□□□ 0.86
CLCN6-207ENST00000376497 NBPF5PQ86XG9 351 aaPredicted RBP20.4■□□□□ 0.86
CLCN6-207ENST00000376497 DLG5Q8TDM6 1919 aa20.4■□□□□ 0.86
CLCN6-207ENST00000376497 KLRG2A4D1S0 409 aaPredicted RBP20.39■□□□□ 0.85
CLCN6-207ENST00000376497 DCTN1Q14203 1278 aa20.39■□□□□ 0.85
CLCN6-207ENST00000376497 NBPF26B4DH59 902 aa20.38■□□□□ 0.85
CLCN6-207ENST00000376497 NBPF10Q6P3W6 841 aaKnown RBP20.38■□□□□ 0.85
CLCN6-207ENST00000376497 NBPF15Q8N660 670 aa20.38■□□□□ 0.85
CLCN6-207ENST00000376497 C7orf43Q8WVR3 580 aa20.38■□□□□ 0.85
CLCN6-207ENST00000376497 LAMB4A4D0S4 1761 aa20.38■□□□□ 0.85
CLCN6-207ENST00000376497 TAF7Q15545 349 aaPredicted RBP20.37■□□□□ 0.85
CLCN6-207ENST00000376497 TPTE2Q6XPS3 522 aa20.37■□□□□ 0.85
CLCN6-207ENST00000376497 SCN4AP35499 1836 aa20.37■□□□□ 0.85
CLCN6-207ENST00000376497 DDNO94850 711 aaPredicted RBP20.36■□□□□ 0.85
CLCN6-207ENST00000376497 NPR1P16066 1061 aa20.36■□□□□ 0.85
CLCN6-207ENST00000376497 COL13A1Q5TAT6 717 aaPredicted RBP20.36■□□□□ 0.85
CLCN6-207ENST00000376497 NIP7Q9Y221 180 aaKnown RBP eCLIP20.36■□□□□ 0.85
CLCN6-207ENST00000376497 NUP98P52948 1817 aa20.35■□□□□ 0.85
CLCN6-207ENST00000376497 CCDC93Q567U6 631 aa20.35■□□□□ 0.85
CLCN6-207ENST00000376497 KDM3BQ7LBC6 1761 aa20.35■□□□□ 0.85
CLCN6-207ENST00000376497 PCNTO95613 3336 aa20.35■□□□□ 0.85
CLCN6-207ENST00000376497 HLFQ16534 295 aa20.33■□□□□ 0.85
CLCN6-207ENST00000376497 CHADLQ6NUI6 762 aa20.33■□□□□ 0.85
CLCN6-207ENST00000376497 FKBP4Q02790 459 aaKnown RBP eCLIP20.32■□□□□ 0.84
CLCN6-207ENST00000376497 MIS18AQ9NYP9 233 aa20.32■□□□□ 0.84
CLCN6-207ENST00000376497 PNISRQ8TF01 805 aaKnown RBP20.31■□□□□ 0.84
CLCN6-207ENST00000376497 L3MBTL3Q96JM7 780 aaPredicted RBP20.31■□□□□ 0.84
CLCN6-207ENST00000376497 IQCA1LA6NCM1 817 aa20.3■□□□□ 0.84
CLCN6-207ENST00000376497 POTEIP0CG38 1075 aa20.3■□□□□ 0.84
CLCN6-207ENST00000376497 POTEJP0CG39 1038 aa20.3■□□□□ 0.84
CLCN6-207ENST00000376497 ALDH1B1P30837 517 aa20.3■□□□□ 0.84
CLCN6-207ENST00000376497 RTKN2Q8IZC4 609 aa20.3■□□□□ 0.84
CLCN6-207ENST00000376497 CREBZFQ9NS37 354 aa20.3■□□□□ 0.84
CLCN6-207ENST00000376497 FAM177BA6PVY3 158 aa20.29■□□□□ 0.84
CLCN6-207ENST00000376497 ERVV-1B6SEH8 477 aa20.29■□□□□ 0.84
CLCN6-207ENST00000376497 NEFMP07197 916 aa20.29■□□□□ 0.84
CLCN6-207ENST00000376497 HSPA1AP0DMV8 641 aaKnown RBP20.29■□□□□ 0.84
CLCN6-207ENST00000376497 HSPA1BP0DMV9 641 aaKnown RBP20.29■□□□□ 0.84
CLCN6-207ENST00000376497 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
CLCN6-207ENST00000376497 TAF1DQ9H5J8 278 aaPredicted RBP20.28■□□□□ 0.84
CLCN6-207ENST00000376497 GTF2E1P29083 439 aaPredicted RBP20.27■□□□□ 0.84
CLCN6-207ENST00000376497 EIF4A1P60842 406 aaKnown RBP20.27■□□□□ 0.84
CLCN6-207ENST00000376497 OLFM4Q6UX06 510 aa20.27■□□□□ 0.84
CLCN6-207ENST00000376497 LDHDQ86WU2 507 aa20.27■□□□□ 0.84
CLCN6-207ENST00000376497 NYXQ9GZU5 481 aa20.27■□□□□ 0.84
CLCN6-207ENST00000376497 ZNF277Q9NRM2 450 aaPredicted RBP20.27■□□□□ 0.84
CLCN6-207ENST00000376497 MAP3K15Q6ZN16 1313 aa20.27■□□□□ 0.83
CLCN6-207ENST00000376497 PASKQ96RG2 1323 aa20.27■□□□□ 0.83
CLCN6-207ENST00000376497 CRY2Q49AN0 593 aa20.26■□□□□ 0.83
CLCN6-207ENST00000376497 SNED1Q8TER0 1413 aa20.26■□□□□ 0.83
CLCN6-207ENST00000376497 ZNF541Q9H0D2 1346 aa20.26■□□□□ 0.83
CLCN6-207ENST00000376497 FZD9O00144 591 aa20.25■□□□□ 0.83
CLCN6-207ENST00000376497 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
CLCN6-207ENST00000376497 NGEFQ8N5V2 710 aa20.25■□□□□ 0.83
CLCN6-207ENST00000376497 ADAMTSL1Q8N6G6 1762 aa20.24■□□□□ 0.83
CLCN6-207ENST00000376497 IARSP41252 1262 aaKnown RBP20.24■□□□□ 0.83
CLCN6-207ENST00000376497 TTLL7Q6ZT98 887 aa20.24■□□□□ 0.83
CLCN6-207ENST00000376497 TNS4Q8IZW8 715 aa20.24■□□□□ 0.83
CLCN6-207ENST00000376497 SYNE4Q8N205 404 aa20.24■□□□□ 0.83
CLCN6-207ENST00000376497 PSMD1Q99460 953 aa20.24■□□□□ 0.83
CLCN6-207ENST00000376497 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
CLCN6-207ENST00000376497 ABCC12Q96J65 1359 aa20.23■□□□□ 0.83
CLCN6-207ENST00000376497 IBTKQ9P2D0 1353 aaPredicted RBP20.23■□□□□ 0.83
CLCN6-207ENST00000376497 RIC1Q4ADV7 1423 aa20.23■□□□□ 0.83
CLCN6-207ENST00000376497 KIF6Q6ZMV9 814 aa20.23■□□□□ 0.83
CLCN6-207ENST00000376497 NUTM1Q86Y26 1132 aa20.23■□□□□ 0.83
CLCN6-207ENST00000376497 PNNQ9H307 717 aaKnown RBP20.23■□□□□ 0.83
CLCN6-207ENST00000376497 HACL1Q9UJ83 578 aa20.23■□□□□ 0.83
CLCN6-207ENST00000376497 ITGBL1O95965 494 aaPredicted RBP20.22■□□□□ 0.83
CLCN6-207ENST00000376497 CC2D2BQ6DHV5 1058 aa20.22■□□□□ 0.83
CLCN6-207ENST00000376497 MKRN1Q9UHC7 482 aaKnown RBP20.22■□□□□ 0.83
CLCN6-207ENST00000376497 MYL6BP14649 208 aa20.21■□□□□ 0.83
CLCN6-207ENST00000376497 HOXA10P31260 410 aaPredicted RBP20.21■□□□□ 0.83
CLCN6-207ENST00000376497 THUMPD2Q9BTF0 503 aaKnown RBP20.21■□□□□ 0.83
CLCN6-207ENST00000376497 ERBB4Q15303 1308 aa20.21■□□□□ 0.83
CLCN6-207ENST00000376497 UBN2Q6ZU65 1347 aa20.21■□□□□ 0.83
CLCN6-207ENST00000376497 CNTNAP1P78357 1384 aa20.21■□□□□ 0.83
CLCN6-207ENST00000376497 EPHX2P34913 555 aa20.2■□□□□ 0.82
CLCN6-207ENST00000376497 SUSD4Q5VX71 490 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms