RNA–Protein interactions for RNA: ENST00000375635.6

C6orf48-202, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-202ENST00000375635 HLFQ16534 295 aa17.28■□□□□ 0.36
C6orf48-202ENST00000375635 HDGFL1Q5TGJ6 251 aa17.28■□□□□ 0.36
C6orf48-202ENST00000375635 CLEC4GQ6UXB4 293 aa17.28■□□□□ 0.36
C6orf48-202ENST00000375635 CHPF2Q9P2E5 772 aa17.28■□□□□ 0.36
C6orf48-202ENST00000375635 PARP3Q9Y6F1 533 aa17.28■□□□□ 0.36
C6orf48-202ENST00000375635 NUP98P52948 1817 aa17.28■□□□□ 0.36
C6orf48-202ENST00000375635 NPM2Q86SE8 214 aaKnown RBP17.27■□□□□ 0.36
C6orf48-202ENST00000375635 KLHL34Q8N239 644 aa17.27■□□□□ 0.36
C6orf48-202ENST00000375635 MAP3K15Q6ZN16 1313 aa17.26■□□□□ 0.35
C6orf48-202ENST00000375635 UTRNP46939 3433 aa17.26■□□□□ 0.35
C6orf48-202ENST00000375635 ERVV-1B6SEH8 477 aa17.26■□□□□ 0.35
C6orf48-202ENST00000375635 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
C6orf48-202ENST00000375635 SERPINB2P05120 415 aa17.25■□□□□ 0.35
C6orf48-202ENST00000375635 COPS6Q7L5N1 327 aa17.25■□□□□ 0.35
C6orf48-202ENST00000375635 DBF4Q9UBU7 674 aaPredicted RBP17.25■□□□□ 0.35
C6orf48-202ENST00000375635 PXDNLA1KZ92 1463 aa17.24■□□□□ 0.35
C6orf48-202ENST00000375635 XAGE3Q8WTP9 111 aa17.24■□□□□ 0.35
C6orf48-202ENST00000375635 CARMIL3Q8ND23 1372 aa17.24■□□□□ 0.35
C6orf48-202ENST00000375635 ATP10DQ9P241 1426 aa17.23■□□□□ 0.35
C6orf48-202ENST00000375635 N4BP2Q86UW6 1770 aaPredicted RBP17.23■□□□□ 0.35
C6orf48-202ENST00000375635 EXOSC9Q06265 439 aaKnown RBP17.23■□□□□ 0.35
C6orf48-202ENST00000375635 TWISTNBQ3B726 338 aaPredicted RBP17.23■□□□□ 0.35
C6orf48-202ENST00000375635 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
C6orf48-202ENST00000375635 ANKRD31Q8N7Z5 1873 aa17.22■□□□□ 0.35
C6orf48-202ENST00000375635 VAMP4O75379 141 aa17.22■□□□□ 0.35
C6orf48-202ENST00000375635 GOLGA2Q08379 1002 aa17.22■□□□□ 0.35
C6orf48-202ENST00000375635 PRR5LQ6MZQ0 368 aa17.22■□□□□ 0.35
C6orf48-202ENST00000375635 KIF6Q6ZMV9 814 aa17.22■□□□□ 0.35
C6orf48-202ENST00000375635 SETDB2Q96T68 719 aa17.22■□□□□ 0.35
C6orf48-202ENST00000375635 ZNF652Q9Y2D9 606 aa17.22■□□□□ 0.35
C6orf48-202ENST00000375635 BRCA1P38398 1863 aaKnown RBP17.21■□□□□ 0.35
C6orf48-202ENST00000375635 KCNA3P22001 575 aa17.21■□□□□ 0.35
C6orf48-202ENST00000375635 SLFN5Q08AF3 891 aa17.21■□□□□ 0.35
C6orf48-202ENST00000375635 AIMP1Q12904 312 aaKnown RBP17.21■□□□□ 0.35
C6orf48-202ENST00000375635 GIGYF2Q6Y7W6 1299 aaKnown RBP17.21■□□□□ 0.35
C6orf48-202ENST00000375635 ZNF34Q8IZ26 560 aa17.21■□□□□ 0.35
C6orf48-202ENST00000375635 CDCA7LQ96GN5 454 aa17.21■□□□□ 0.35
C6orf48-202ENST00000375635 MYH16Q9H6N6 1097 aa17.21■□□□□ 0.35
C6orf48-202ENST00000375635 PHAXQ9H814 394 aaKnown RBP17.21■□□□□ 0.35
C6orf48-202ENST00000375635 HYPKQ9NX55 129 aa17.21■□□□□ 0.35
C6orf48-202ENST00000375635 TGFB2P61812 414 aa17.2■□□□□ 0.34
C6orf48-202ENST00000375635 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
C6orf48-202ENST00000375635 TRMT2AQ8IZ69 625 aaKnown RBP17.2■□□□□ 0.34
C6orf48-202ENST00000375635 NIP7Q9Y221 180 aaKnown RBP eCLIP17.2■□□□□ 0.341e-323■■■□□ 14.9
C6orf48-202ENST00000375635 UBN2Q6ZU65 1347 aa17.2■□□□□ 0.34
C6orf48-202ENST00000375635 DPEP1P16444 411 aa17.19■□□□□ 0.34
C6orf48-202ENST00000375635 YBX3P16989 372 aaKnown RBP eCLIP17.19■□□□□ 0.342e-48■■□□□ 13.6
C6orf48-202ENST00000375635 CCDC24Q8N4L8 307 aa17.19■□□□□ 0.34
C6orf48-202ENST00000375635 ANKRD36CQ5JPF3 1778 aa17.19■□□□□ 0.34
C6orf48-202ENST00000375635 A0A0G2JLW4 131 aa17.18■□□□□ 0.34
C6orf48-202ENST00000375635 E9PSI1 815 aa17.18■□□□□ 0.34
C6orf48-202ENST00000375635 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
C6orf48-202ENST00000375635 PLBD2Q8NHP8 589 aa17.18■□□□□ 0.34
C6orf48-202ENST00000375635 GPTP24298 496 aa17.17■□□□□ 0.34
C6orf48-202ENST00000375635 CHRNA5P30532 468 aa17.17■□□□□ 0.34
C6orf48-202ENST00000375635 ANKRD13DQ6ZTN6 518 aa17.17■□□□□ 0.34
C6orf48-202ENST00000375635 G2E3Q7L622 706 aa17.17■□□□□ 0.34
C6orf48-202ENST00000375635 DLEC1Q9Y238 1755 aa17.17■□□□□ 0.34
C6orf48-202ENST00000375635 ARFGEF2Q9Y6D5 1785 aa17.17■□□□□ 0.34
C6orf48-202ENST00000375635 CACNA1FO60840 1977 aa17.17■□□□□ 0.34
C6orf48-202ENST00000375635 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
C6orf48-202ENST00000375635 TCIRG1Q13488 830 aa17.16■□□□□ 0.34
C6orf48-202ENST00000375635 SUSD4Q5VX71 490 aa17.16■□□□□ 0.34
C6orf48-202ENST00000375635 NBPF5PQ86XG9 351 aaPredicted RBP17.16■□□□□ 0.34
C6orf48-202ENST00000375635 CNBD1Q8NA66 436 aa17.16■□□□□ 0.34
C6orf48-202ENST00000375635 CHMP4AQ9BY43 222 aa17.16■□□□□ 0.34
C6orf48-202ENST00000375635 IBTKQ9P2D0 1353 aaPredicted RBP17.15■□□□□ 0.34
C6orf48-202ENST00000375635 NTSR2O95665 410 aa17.15■□□□□ 0.34
C6orf48-202ENST00000375635 BRIP1Q9BX63 1249 aa17.15■□□□□ 0.34
C6orf48-202ENST00000375635 KLRG2A4D1S0 409 aaPredicted RBP17.14■□□□□ 0.33
C6orf48-202ENST00000375635 FAM177BA6PVY3 158 aa17.14■□□□□ 0.33
C6orf48-202ENST00000375635 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
C6orf48-202ENST00000375635 TPTE2Q6XPS3 522 aa17.14■□□□□ 0.33
C6orf48-202ENST00000375635 NLRP10Q86W26 655 aa17.14■□□□□ 0.33
C6orf48-202ENST00000375635 ISCA1Q9BUE6 129 aa17.14■□□□□ 0.33
C6orf48-202ENST00000375635 WWC3Q9ULE0 1092 aa17.14■□□□□ 0.33
C6orf48-202ENST00000375635 ABCC12Q96J65 1359 aa17.14■□□□□ 0.33
C6orf48-202ENST00000375635 HSP90AB3PQ58FF7 597 aa17.13■□□□□ 0.33
C6orf48-202ENST00000375635 STK31Q9BXU1 1019 aa17.13■□□□□ 0.33
C6orf48-202ENST00000375635 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
C6orf48-202ENST00000375635 ADCY9O60503 1353 aa17.13■□□□□ 0.33
C6orf48-202ENST00000375635 TRIM28Q13263 835 aaKnown RBP17.12■□□□□ 0.33
C6orf48-202ENST00000375635 GPR162Q16538 588 aa17.12■□□□□ 0.33
C6orf48-202ENST00000375635 ERFEQ4G0M1 354 aa17.12■□□□□ 0.33
C6orf48-202ENST00000375635 PARP10Q53GL7 1025 aa17.12■□□□□ 0.33
C6orf48-202ENST00000375635 NUTM1Q86Y26 1132 aa17.12■□□□□ 0.33
C6orf48-202ENST00000375635 PDE6BP35913 854 aa17.11■□□□□ 0.33
C6orf48-202ENST00000375635 ST5P78524 1137 aa17.11■□□□□ 0.33
C6orf48-202ENST00000375635 HNRNPUQ00839 825 aaKnown RBP eCLIP17.11■□□□□ 0.33
C6orf48-202ENST00000375635 C2CD5Q86YS7 1000 aa17.11■□□□□ 0.33
C6orf48-202ENST00000375635 ARFGEF1Q9Y6D6 1849 aa17.11■□□□□ 0.33
C6orf48-202ENST00000375635 RIC1Q4ADV7 1423 aa17.11■□□□□ 0.33
C6orf48-202ENST00000375635 ATP5J2-PTCD1G3V325 749 aa17.1■□□□□ 0.33
C6orf48-202ENST00000375635 SRGNP10124 158 aa17.1■□□□□ 0.33
C6orf48-202ENST00000375635 FLIIQ13045 1269 aa17.1■□□□□ 0.33
C6orf48-202ENST00000375635 KSR2Q6VAB6 950 aa17.1■□□□□ 0.33
C6orf48-202ENST00000375635 RIC3Q7Z5B4 369 aa17.1■□□□□ 0.33
C6orf48-202ENST00000375635 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
C6orf48-202ENST00000375635 SYNE4Q8N205 404 aa17.1■□□□□ 0.33
C6orf48-202ENST00000375635 NYXQ9GZU5 481 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms