RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 IGHMBP2P38935 993 aaKnown RBP15.98■□□□□ 0.15
VCP-201ENST00000358901 ANAPC15P60006 121 aa15.98■□□□□ 0.15
VCP-201ENST00000358901 UVSSAQ2YD98 709 aa15.98■□□□□ 0.15
VCP-201ENST00000358901 LUC7LQ9NQ29 371 aaKnown RBP15.98■□□□□ 0.15
VCP-201ENST00000358901 POLR3DP05423 398 aaPredicted RBP15.98■□□□□ 0.15
VCP-201ENST00000358901 PLEKHM2Q8IWE5 1019 aa15.98■□□□□ 0.15
VCP-201ENST00000358901 USP16Q9Y5T5 823 aa15.98■□□□□ 0.15
VCP-201ENST00000358901 RNF123Q5XPI4 1314 aa15.98■□□□□ 0.15
VCP-201ENST00000358901 ATP8B2P98198 1209 aa15.98■□□□□ 0.15
VCP-201ENST00000358901 EIF4A2Q14240 407 aaKnown RBP15.98■□□□□ 0.15
VCP-201ENST00000358901 CEP85Q6P2H3 762 aa15.98■□□□□ 0.15
VCP-201ENST00000358901 CCDC102AQ96A19 550 aa15.98■□□□□ 0.15
VCP-201ENST00000358901 CHPF2Q9P2E5 772 aa15.98■□□□□ 0.15
VCP-201ENST00000358901 CEP131Q9UPN4 1083 aa15.98■□□□□ 0.15
VCP-201ENST00000358901 ZSCAN12O43309 604 aa15.97■□□□□ 0.15
VCP-201ENST00000358901 DDX46Q7L014 1031 aaKnown RBP15.97■□□□□ 0.15
VCP-201ENST00000358901 RAB11FIP4Q86YS3 637 aa15.97■□□□□ 0.15
VCP-201ENST00000358901 ORC3Q9UBD5 711 aaPredicted RBP15.97■□□□□ 0.15
VCP-201ENST00000358901 LRRC2Q9BYS8 371 aa15.97■□□□□ 0.15
VCP-201ENST00000358901 FAM193AP78312 1265 aa15.96■□□□□ 0.15
VCP-201ENST00000358901 BICDL1Q6ZP65 573 aa15.96■□□□□ 0.15
VCP-201ENST00000358901 CNNM3Q8NE01 707 aa15.96■□□□□ 0.15
VCP-201ENST00000358901 RBM8AQ9Y5S9 174 aaKnown RBP15.96■□□□□ 0.15
VCP-201ENST00000358901 KDM2BQ8NHM5 1336 aa15.96■□□□□ 0.15
VCP-201ENST00000358901 CCDC196A0A1B0GTZ2 297 aa15.96■□□□□ 0.15
VCP-201ENST00000358901 PRKCSHP14314 528 aaPredicted RBP15.96■□□□□ 0.15
VCP-201ENST00000358901 ISM2Q6H9L7 571 aa15.96■□□□□ 0.15
VCP-201ENST00000358901 TTC12Q9H892 705 aaPredicted RBP15.96■□□□□ 0.15
VCP-201ENST00000358901 IFIT3O14879 490 aaKnown RBP15.96■□□□□ 0.14
VCP-201ENST00000358901 PLCH2O75038 1416 aa15.95■□□□□ 0.14
VCP-201ENST00000358901 DNM1Q05193 864 aaKnown RBP15.95■□□□□ 0.14
VCP-201ENST00000358901 STX1AQ16623 288 aa15.95■□□□□ 0.14
VCP-201ENST00000358901 MEX3CQ5U5Q3 659 aaKnown RBP15.95■□□□□ 0.14
VCP-201ENST00000358901 TMC6Q7Z403 805 aa15.95■□□□□ 0.14
VCP-201ENST00000358901 KIAA1328Q86T90 577 aa15.95■□□□□ 0.14
VCP-201ENST00000358901 HMG20BQ9P0W2 317 aa15.95■□□□□ 0.14
VCP-201ENST00000358901 SLC12A7Q9Y666 1083 aa15.95■□□□□ 0.14
VCP-201ENST00000358901 KIF4BQ2VIQ3 1234 aa15.95■□□□□ 0.14
VCP-201ENST00000358901 CPLX3Q8WVH0 158 aa15.95■□□□□ 0.14
VCP-201ENST00000358901 NEMFO60524 1076 aa15.95■□□□□ 0.14
VCP-201ENST00000358901 MAP3K12Q12852 859 aa15.95■□□□□ 0.14
VCP-201ENST00000358901 ZKSCAN5Q9Y2L8 839 aa15.95■□□□□ 0.14
VCP-201ENST00000358901 RAPGEF6Q8TEU7 1601 aa15.95■□□□□ 0.14
VCP-201ENST00000358901 BMP2KQ9NSY1 1161 aaPredicted RBP15.94■□□□□ 0.14
VCP-201ENST00000358901 DACT1Q9NYF0 836 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 TMOD3Q9NYL9 352 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 MYO6Q9UM54 1294 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 SYCP2Q9BX26 1530 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 GOLGA8AA7E2F4 631 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 DYNC1I1O14576 645 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 ZBTB7BO15156 539 aaPredicted RBP15.94■□□□□ 0.14
VCP-201ENST00000358901 GPTP24298 496 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 MICU3Q86XE3 530 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 CENPHQ9H3R5 247 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 PZPP20742 1482 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 TRMT112Q9UI30 125 aaKnown RBP15.94■□□□□ 0.14
VCP-201ENST00000358901 POGZQ7Z3K3 1410 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 NOLC1Q14978 699 aaKnown RBP eCLIP15.94■□□□□ 0.141e-6■■■□□ 18
VCP-201ENST00000358901 ANKRD13DQ6ZTN6 518 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 CCDC144CPQ8IYA2 1237 aa15.94■□□□□ 0.14
VCP-201ENST00000358901 RANBP6O60518 1105 aaKnown RBP15.93■□□□□ 0.14
VCP-201ENST00000358901 GSDMDP57764 484 aa15.93■□□□□ 0.14
VCP-201ENST00000358901 LDHAL6AQ6ZMR3 332 aa15.93■□□□□ 0.14
VCP-201ENST00000358901 CCDC186Q7Z3E2 898 aa15.93■□□□□ 0.14
VCP-201ENST00000358901 DENND4BO75064 1496 aaPredicted RBP15.93■□□□□ 0.14
VCP-201ENST00000358901 MTHFSDQ2M296 383 aaKnown RBP15.93■□□□□ 0.14
VCP-201ENST00000358901 TRAPPC8Q9Y2L5 1435 aa15.93■□□□□ 0.14
VCP-201ENST00000358901 CAVIN2O95810 425 aa15.93■□□□□ 0.14
VCP-201ENST00000358901 IARSP41252 1262 aaKnown RBP15.93■□□□□ 0.14
VCP-201ENST00000358901 SYCP1Q15431 976 aa15.93■□□□□ 0.14
VCP-201ENST00000358901 PA2G4Q9UQ80 394 aaKnown RBP15.93■□□□□ 0.14
VCP-201ENST00000358901 DUOX2Q9NRD8 1548 aa15.93■□□□□ 0.14
VCP-201ENST00000358901 GOLGA6L10A6NI86 522 aa15.92■□□□□ 0.14
VCP-201ENST00000358901 F13A1P00488 732 aa15.92■□□□□ 0.14
VCP-201ENST00000358901 PPP4R3BQ5MIZ7 849 aa15.92■□□□□ 0.14
VCP-201ENST00000358901 FAM200AQ8TCP9 573 aa15.92■□□□□ 0.14
VCP-201ENST00000358901 PRIMPOLQ96LW4 560 aa15.92■□□□□ 0.14
VCP-201ENST00000358901 USP26Q9BXU7 913 aa15.92■□□□□ 0.14
VCP-201ENST00000358901 KIF5CO60282 957 aa15.92■□□□□ 0.14
VCP-201ENST00000358901 PUS7Q96PZ0 661 aaKnown RBP15.92■□□□□ 0.14
VCP-201ENST00000358901 ZSCAN16Q9H4T2 348 aaPredicted RBP15.92■□□□□ 0.14
VCP-201ENST00000358901 NUTM2BA6NNL0 878 aaPredicted RBP15.92■□□□□ 0.14
VCP-201ENST00000358901 NUTM2EB1AL46 878 aaPredicted RBP15.92■□□□□ 0.14
VCP-201ENST00000358901 NUTM2AQ8IVF1 878 aaPredicted RBP15.92■□□□□ 0.14
VCP-201ENST00000358901 CTCFLQ8NI51 663 aaPredicted RBP15.92■□□□□ 0.14
VCP-201ENST00000358901 TMX1Q9H3N1 280 aa15.92■□□□□ 0.14
VCP-201ENST00000358901 SPDYE4A6NLX3 237 aa15.91■□□□□ 0.14
VCP-201ENST00000358901 ANO6Q4KMQ2 910 aa15.91■□□□□ 0.14
VCP-201ENST00000358901 OTUD7AQ8TE49 926 aaPredicted RBP15.91■□□□□ 0.14
VCP-201ENST00000358901 COL17A1Q9UMD9 1497 aaPredicted RBP15.91■□□□□ 0.14
VCP-201ENST00000358901 USP5P45974 858 aa15.91■□□□□ 0.14
VCP-201ENST00000358901 ARHGEF12Q9NZN5 1544 aa15.91■□□□□ 0.14
VCP-201ENST00000358901 IQCA1Q86XH1 822 aa15.91■□□□□ 0.14
VCP-201ENST00000358901 GRM8O00222 908 aa15.91■□□□□ 0.14
VCP-201ENST00000358901 COPS6Q7L5N1 327 aa15.91■□□□□ 0.14
VCP-201ENST00000358901 IFNL2Q8IZJ0 200 aa15.91■□□□□ 0.14
VCP-201ENST00000358901 CGNQ9P2M7 1197 aaKnown RBP15.91■□□□□ 0.14
VCP-201ENST00000358901 AK2P54819 239 aa15.9■□□□□ 0.14
VCP-201ENST00000358901 XAGE3Q8WTP9 111 aa15.9■□□□□ 0.14
VCP-201ENST00000358901 A0A1W2PP64 1363 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms