RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 NRXN1Q9ULB1 1477 aa9.42□□□□□ -0.9
C11orf54-202ENST00000354421 IFT172Q9UG01 1749 aa9.42□□□□□ -0.9
C11orf54-202ENST00000354421 TMEM131LA2VDJ0 1609 aa9.42□□□□□ -0.9
C11orf54-202ENST00000354421 EFCAB6Q5THR3 1501 aa9.42□□□□□ -0.9
C11orf54-202ENST00000354421 CCDC85CA6NKD9 419 aa9.42□□□□□ -0.9
C11orf54-202ENST00000354421 C3orf80F5H4A9 247 aa9.42□□□□□ -0.9
C11orf54-202ENST00000354421 PRIM1P49642 420 aaKnown RBP9.42□□□□□ -0.9
C11orf54-202ENST00000354421 HDAC1Q13547 482 aaPredicted RBP9.42□□□□□ -0.9
C11orf54-202ENST00000354421 LCE2AQ5TA79 106 aaPredicted RBP9.42□□□□□ -0.9
C11orf54-202ENST00000354421 MTFR1LQ9H019 292 aa9.42□□□□□ -0.9
C11orf54-202ENST00000354421 TNNQ9UQP3 1299 aa9.42□□□□□ -0.9
C11orf54-202ENST00000354421 RRP9O43818 475 aaKnown RBP9.41□□□□□ -0.9
C11orf54-202ENST00000354421 SNX21Q969T3 373 aa9.41□□□□□ -0.9
C11orf54-202ENST00000354421 PANK2Q9BZ23 570 aa9.41□□□□□ -0.9
C11orf54-202ENST00000354421 MYH16Q9H6N6 1097 aa9.41□□□□□ -0.9
C11orf54-202ENST00000354421 PDE4DIPQ5VU43 2346 aa9.41□□□□□ -0.9
C11orf54-202ENST00000354421 PTMSP20962 102 aa9.4□□□□□ -0.9
C11orf54-202ENST00000354421 PRPF38BQ5VTL8 546 aaKnown RBP9.4□□□□□ -0.9
C11orf54-202ENST00000354421 ZKSCAN2Q63HK3 967 aa9.4□□□□□ -0.9
C11orf54-202ENST00000354421 MORC1Q86VD1 984 aa9.4□□□□□ -0.9
C11orf54-202ENST00000354421 NAP1L5Q96NT1 182 aaPredicted RBP9.4□□□□□ -0.9
C11orf54-202ENST00000354421 GRPEL1Q9HAV7 217 aa9.4□□□□□ -0.9
C11orf54-202ENST00000354421 WDR70Q9NW82 654 aa9.4□□□□□ -0.9
C11orf54-202ENST00000354421 TNRC18O15417 2968 aaPredicted RBP9.4□□□□□ -0.91
C11orf54-202ENST00000354421 HSP90AA1P07900 732 aaKnown RBP9.39□□□□□ -0.91
C11orf54-202ENST00000354421 OSBPP22059 807 aa9.39□□□□□ -0.91
C11orf54-202ENST00000354421 CFAP70Q5T0N1 1121 aa9.39□□□□□ -0.91
C11orf54-202ENST00000354421 HSCBQ8IWL3 235 aa9.39□□□□□ -0.91
C11orf54-202ENST00000354421 DZIP1LQ8IYY4 767 aaKnown RBP9.39□□□□□ -0.91
C11orf54-202ENST00000354421 TTC13Q8NBP0 860 aa9.39□□□□□ -0.91
C11orf54-202ENST00000354421 NSD3Q9BZ95 1437 aa9.39□□□□□ -0.91
C11orf54-202ENST00000354421 YBX3P16989 372 aaKnown RBP eCLIP9.39□□□□□ -0.91
C11orf54-202ENST00000354421 RBM25P49756 843 aaKnown RBP9.39□□□□□ -0.91
C11orf54-202ENST00000354421 SWT1Q5T5J6 900 aaKnown RBP9.39□□□□□ -0.91
C11orf54-202ENST00000354421 SMC5Q8IY18 1101 aa9.39□□□□□ -0.91
C11orf54-202ENST00000354421 NKX2-3Q8TAU0 364 aa9.39□□□□□ -0.91
C11orf54-202ENST00000354421 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
C11orf54-202ENST00000354421 CFAP53Q96M91 514 aa9.39□□□□□ -0.91
C11orf54-202ENST00000354421 CDHR5Q9HBB8 845 aa9.39□□□□□ -0.91
C11orf54-202ENST00000354421 ESPNB1AK53 854 aa9.38□□□□□ -0.91
C11orf54-202ENST00000354421 MFAP1P55081 439 aaKnown RBP9.38□□□□□ -0.91
C11orf54-202ENST00000354421 SKOR2Q2VWA4 1001 aaPredicted RBP9.38□□□□□ -0.91
C11orf54-202ENST00000354421 SPRYD3Q8NCJ5 442 aa9.38□□□□□ -0.91
C11orf54-202ENST00000354421 GZF1Q9H116 711 aaPredicted RBP9.38□□□□□ -0.91
C11orf54-202ENST00000354421 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
C11orf54-202ENST00000354421 ADGRF5Q8IZF2 1346 aa9.37□□□□□ -0.91
C11orf54-202ENST00000354421 KIF1BO60333 1816 aa9.37□□□□□ -0.91
C11orf54-202ENST00000354421 ZPR1O75312 459 aa9.37□□□□□ -0.91
C11orf54-202ENST00000354421 COPS2P61201 443 aa9.37□□□□□ -0.91
C11orf54-202ENST00000354421 PUS7Q96PZ0 661 aaKnown RBP9.37□□□□□ -0.91
C11orf54-202ENST00000354421 NSD2O96028 1365 aa9.37□□□□□ -0.91
C11orf54-202ENST00000354421 FSTL1Q12841 308 aa9.36□□□□□ -0.91
C11orf54-202ENST00000354421 DDX19BQ9UMR2 479 aa9.36□□□□□ -0.91
C11orf54-202ENST00000354421 TBX22Q9Y458 520 aa9.36□□□□□ -0.91
C11orf54-202ENST00000354421 INSM1Q01101 510 aaPredicted RBP9.36□□□□□ -0.91
C11orf54-202ENST00000354421 HSP90AA2PQ14568 343 aaPredicted RBP9.36□□□□□ -0.91
C11orf54-202ENST00000354421 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
C11orf54-202ENST00000354421 FTSJ3Q8IY81 847 aaKnown RBP9.36□□□□□ -0.91
C11orf54-202ENST00000354421 BCL2L13Q9BXK5 485 aa9.36□□□□□ -0.91
C11orf54-202ENST00000354421 IL16Q14005 1332 aa9.35□□□□□ -0.91
C11orf54-202ENST00000354421 GOLGB1Q14789 3259 aaKnown RBP9.35□□□□□ -0.91
C11orf54-202ENST00000354421 QRICH2Q9H0J4 1663 aa9.35□□□□□ -0.91
C11orf54-202ENST00000354421 FOXN1O15353 648 aa9.35□□□□□ -0.91
C11orf54-202ENST00000354421 TPM2P07951 284 aa9.35□□□□□ -0.91
C11orf54-202ENST00000354421 MTHFSP49914 203 aa9.35□□□□□ -0.91
C11orf54-202ENST00000354421 RAB3GAP1Q15042 981 aa9.35□□□□□ -0.91
C11orf54-202ENST00000354421 PADI6Q6TGC4 694 aa9.35□□□□□ -0.91
C11orf54-202ENST00000354421 GBP4Q96PP9 640 aa9.35□□□□□ -0.91
C11orf54-202ENST00000354421 ADGRB3O60242 1522 aa9.35□□□□□ -0.91
C11orf54-202ENST00000354421 ABCC11Q96J66 1382 aa9.35□□□□□ -0.91
C11orf54-202ENST00000354421 ARHGAP31Q2M1Z3 1444 aa9.34□□□□□ -0.91
C11orf54-202ENST00000354421 NEXMIFQ5QGS0 1516 aa9.34□□□□□ -0.91
C11orf54-202ENST00000354421 TNPO1Q92973 898 aaKnown RBP9.34□□□□□ -0.91
C11orf54-202ENST00000354421 PCDHB3Q9Y5E6 796 aa9.34□□□□□ -0.91
C11orf54-202ENST00000354421 ERBB4Q15303 1308 aa9.34□□□□□ -0.91
C11orf54-202ENST00000354421 NOS1P29475 1434 aa9.34□□□□□ -0.91
C11orf54-202ENST00000354421 LMTK2Q8IWU2 1503 aa9.34□□□□□ -0.91
C11orf54-202ENST00000354421 TRIM27P14373 513 aa9.34□□□□□ -0.92
C11orf54-202ENST00000354421 NUCB1Q02818 461 aa9.34□□□□□ -0.92
C11orf54-202ENST00000354421 ATF7IPQ6VMQ6 1270 aa9.34□□□□□ -0.92
C11orf54-202ENST00000354421 CLEC17AQ6ZS10 378 aa9.34□□□□□ -0.92
C11orf54-202ENST00000354421 PPP1R9BQ96SB3 815 aa9.34□□□□□ -0.92
C11orf54-202ENST00000354421 ADGRB1O14514 1584 aa9.33□□□□□ -0.92
C11orf54-202ENST00000354421 IBTKQ9P2D0 1353 aaPredicted RBP9.33□□□□□ -0.92
C11orf54-202ENST00000354421 SLC19A1P41440 591 aa9.33□□□□□ -0.92
C11orf54-202ENST00000354421 GAS2L3Q86XJ1 694 aa9.33□□□□□ -0.92
C11orf54-202ENST00000354421 PKNOX2Q96KN3 472 aa9.33□□□□□ -0.92
C11orf54-202ENST00000354421 SMC4Q9NTJ3 1288 aa9.33□□□□□ -0.92
C11orf54-202ENST00000354421 ZBTB40Q9NUA8 1239 aa9.33□□□□□ -0.92
C11orf54-202ENST00000354421 KIF16BQ96L93 1317 aa9.32□□□□□ -0.92
C11orf54-202ENST00000354421 CTCFP49711 727 aaPredicted RBP9.32□□□□□ -0.92
C11orf54-202ENST00000354421 EXOSC9Q06265 439 aaKnown RBP9.32□□□□□ -0.92
C11orf54-202ENST00000354421 TRIM44Q96DX7 344 aaPredicted RBP9.32□□□□□ -0.92
C11orf54-202ENST00000354421 SLC12A5Q9H2X9 1139 aa9.32□□□□□ -0.92
C11orf54-202ENST00000354421 C14orf93Q9H972 538 aaKnown RBP9.32□□□□□ -0.92
C11orf54-202ENST00000354421 ANKRD36BQ8N2N9 1353 aa9.31□□□□□ -0.92
C11orf54-202ENST00000354421 DGAT1O75907 488 aa9.31□□□□□ -0.92
C11orf54-202ENST00000354421 CCDC173Q0VFZ6 552 aa9.31□□□□□ -0.92
C11orf54-202ENST00000354421 BMP2KLQ5H9B9 411 aa9.31□□□□□ -0.92
C11orf54-202ENST00000354421 SSH1Q8WYL5 1049 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms