RNA–Protein interactions for RNA: ENST00000350896.3

MSR1-202, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5 BASIC

Gene MSR1, Length 3,572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-202ENST00000350896 ELF2Q15723 593 aa8.1□□□□□ -1.11
MSR1-202ENST00000350896 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.1□□□□□ -1.11
MSR1-202ENST00000350896 ANKRD20A12PQ8NF67 263 aa8.1□□□□□ -1.11
MSR1-202ENST00000350896 SRCIN1Q9C0H9 1055 aa8.1□□□□□ -1.11
MSR1-202ENST00000350896 TNNQ9UQP3 1299 aa8.1□□□□□ -1.11
MSR1-202ENST00000350896 EIF3JO75822 258 aaKnown RBP8.1□□□□□ -1.11
MSR1-202ENST00000350896 F13A1P00488 732 aa8.1□□□□□ -1.11
MSR1-202ENST00000350896 DDR1Q08345 913 aa8.1□□□□□ -1.11
MSR1-202ENST00000350896 CT47A1Q5JQC4 288 aaPredicted RBP8.1□□□□□ -1.11
MSR1-202ENST00000350896 SPATS2Q86XZ4 545 aaKnown RBP8.1□□□□□ -1.11
MSR1-202ENST00000350896 C17orf53Q8N3J3 647 aaPredicted RBP8.1□□□□□ -1.11
MSR1-202ENST00000350896 ANKRD44Q8N8A2 993 aa8.1□□□□□ -1.11
MSR1-202ENST00000350896 PSMD1Q99460 953 aa8.1□□□□□ -1.11
MSR1-202ENST00000350896 SH2B1Q9NRF2 756 aaPredicted RBP8.1□□□□□ -1.11
MSR1-202ENST00000350896 QRICH2Q9H0J4 1663 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 CCDC151A5D8V7 595 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 EXOSC9Q06265 439 aaKnown RBP8.09□□□□□ -1.11
MSR1-202ENST00000350896 TYRO3Q06418 890 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 JMYQ8N9B5 988 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 FAM210AQ96ND0 272 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 SYCP2Q9BX26 1530 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 CD109Q6YHK3 1445 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 MAP2K2P36507 400 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 LRRFIP1Q32MZ4 808 aaKnown RBP8.09□□□□□ -1.11
MSR1-202ENST00000350896 NBPF9Q3BBW0 867 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 MORC1Q86VD1 984 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 UBXN4Q92575 508 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 SCAND2PQ9GZW5 306 aaPredicted RBP8.09□□□□□ -1.11
MSR1-202ENST00000350896 NUP62CLQ9H1M0 184 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 ACBD3Q9H3P7 528 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 CLIP2Q9UDT6 1046 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 MRVI1Q9Y6F6 885 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 ITSN1Q15811 1721 aa8.09□□□□□ -1.11
MSR1-202ENST00000350896 NPHP3Q7Z494 1330 aa8.09□□□□□ -1.12
MSR1-202ENST00000350896 MAP2K7O14733 419 aa8.09□□□□□ -1.12
MSR1-202ENST00000350896 AP5Z1O43299 807 aa8.09□□□□□ -1.12
MSR1-202ENST00000350896 IRX1P78414 480 aaPredicted RBP8.09□□□□□ -1.12
MSR1-202ENST00000350896 MAP2K1Q02750 393 aaPredicted RBP8.09□□□□□ -1.12
MSR1-202ENST00000350896 PSME1Q06323 249 aa8.09□□□□□ -1.12
MSR1-202ENST00000350896 RABGGTAQ92696 567 aa8.09□□□□□ -1.12
MSR1-202ENST00000350896 MPHOSPH8Q99549 860 aa8.09□□□□□ -1.12
MSR1-202ENST00000350896 KNDC1Q76NI1 1749 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 N4BP2Q86UW6 1770 aaPredicted RBP8.08□□□□□ -1.12
MSR1-202ENST00000350896 PNPLA6Q8IY17 1366 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 FAM177BA6PVY3 158 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 GADD45BO75293 160 aaPredicted RBP8.08□□□□□ -1.12
MSR1-202ENST00000350896 TDO2P48775 406 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 SETQ01105 290 aaPredicted RBP8.08□□□□□ -1.12
MSR1-202ENST00000350896 SMC1AQ14683 1233 aaKnown RBP8.08□□□□□ -1.12
MSR1-202ENST00000350896 POTEDQ86YR6 584 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 REXO1L1PQ8IX06 675 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 C10orf67Q8IYJ2 551 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 CARD14Q9BXL6 1004 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 NSD3Q9BZ95 1437 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 MSH6P52701 1360 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 STX6O43752 255 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 PDCP20941 246 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 TMPOP42166 694 aaKnown RBP8.08□□□□□ -1.12
MSR1-202ENST00000350896 USP5P45974 858 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 NEK4P51957 841 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 NBPF10Q6P3W6 841 aaKnown RBP8.08□□□□□ -1.12
MSR1-202ENST00000350896 NBPF11Q86T75 865 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 BPIFA3Q9BQP9 254 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 ARFGAP3Q9NP61 516 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 LRRC7Q96NW7 1537 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 CARMIL2Q6F5E8 1435 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 KIAA0232Q92628 1395 aa8.08□□□□□ -1.12
MSR1-202ENST00000350896 HMGB1P09429 215 aaKnown RBP8.07□□□□□ -1.12
MSR1-202ENST00000350896 SDSP20132 328 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 MRPL50Q8N5N7 158 aaKnown RBP8.07□□□□□ -1.12
MSR1-202ENST00000350896 CACTINQ8WUQ7 758 aaKnown RBP8.07□□□□□ -1.12
MSR1-202ENST00000350896 SMARCE1Q969G3 411 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 GBP3Q9H0R5 595 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 CLSTN2Q9H4D0 955 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 ATP10DQ9P241 1426 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 KLHL33A6NCF5 533 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 EIF3CLB5ME19 914 aaKnown RBP8.07□□□□□ -1.12
MSR1-202ENST00000350896 TADA3O75528 432 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 MYCNP04198 464 aaPredicted RBP8.07□□□□□ -1.12
MSR1-202ENST00000350896 SNW1Q13573 536 aaKnown RBP8.07□□□□□ -1.12
MSR1-202ENST00000350896 TSGA10IPQ3SY00 556 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 ATL3Q6DD88 541 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 EIF3CQ99613 913 aaKnown RBP8.07□□□□□ -1.12
MSR1-202ENST00000350896 ADAM21Q9UKJ8 722 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 SUFUQ9UMX1 484 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 CRYBG1Q9Y4K1 1723 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 TTC21AQ8NDW8 1320 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 HMMRO75330 724 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 CASTP20810 708 aaKnown RBP8.07□□□□□ -1.12
MSR1-202ENST00000350896 CCZ1BP86790 482 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 CCZ1P86791 482 aaPredicted RBP8.07□□□□□ -1.12
MSR1-202ENST00000350896 RTF1Q92541 710 aaKnown RBP8.07□□□□□ -1.12
MSR1-202ENST00000350896 TRIM5Q9C035 493 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 VIPAS39Q9H9C1 493 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 TRIM35Q9UPQ4 493 aa8.07□□□□□ -1.12
MSR1-202ENST00000350896 CCDC189A1A4V9 331 aa8.06□□□□□ -1.12
MSR1-202ENST00000350896 PLCH2O75038 1416 aa8.06□□□□□ -1.12
MSR1-202ENST00000350896 PPFIA4O75335 1185 aa8.06□□□□□ -1.12
MSR1-202ENST00000350896 TBC1D8O95759 1140 aa8.06□□□□□ -1.12
MSR1-202ENST00000350896 OAS2P29728 719 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms