RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 PIP4K2AP48426 406 aaPredicted RBP13.41□□□□□ -0.26
SNRPD2-201ENST00000342669 PRELPP51888 382 aa13.41□□□□□ -0.26
SNRPD2-201ENST00000342669 DCTN1Q14203 1278 aa13.41□□□□□ -0.26
SNRPD2-201ENST00000342669 IFFO2Q5TF58 517 aa13.41□□□□□ -0.26
SNRPD2-201ENST00000342669 DNAJC5GQ8N7S2 189 aa13.41□□□□□ -0.26
SNRPD2-201ENST00000342669 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
SNRPD2-201ENST00000342669 SLX4Q8IY92 1834 aa13.41□□□□□ -0.26
SNRPD2-201ENST00000342669 PRAMEF22A3QJZ6 481 aa13.4□□□□□ -0.26
SNRPD2-201ENST00000342669 NFKBIEO00221 500 aa13.4□□□□□ -0.26
SNRPD2-201ENST00000342669 VEGFAP15692 232 aaPredicted RBP13.4□□□□□ -0.26
SNRPD2-201ENST00000342669 TAF7Q15545 349 aaPredicted RBP13.4□□□□□ -0.26
SNRPD2-201ENST00000342669 CLEC4GQ6UXB4 293 aa13.4□□□□□ -0.26
SNRPD2-201ENST00000342669 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
SNRPD2-201ENST00000342669 CNKSR1Q969H4 720 aa13.4□□□□□ -0.26
SNRPD2-201ENST00000342669 ARFGEF2Q9Y6D5 1785 aa13.4□□□□□ -0.26
SNRPD2-201ENST00000342669 STYK1Q6J9G0 422 aa13.39□□□□□ -0.27
SNRPD2-201ENST00000342669 DPY19L2Q6NUT2 758 aa13.39□□□□□ -0.27
SNRPD2-201ENST00000342669 NBPF5PQ86XG9 351 aaPredicted RBP13.39□□□□□ -0.27
SNRPD2-201ENST00000342669 MASTLQ96GX5 879 aa13.39□□□□□ -0.27
SNRPD2-201ENST00000342669 LAMB4A4D0S4 1761 aa13.38□□□□□ -0.27
SNRPD2-201ENST00000342669 SRGNP10124 158 aa13.38□□□□□ -0.27
SNRPD2-201ENST00000342669 ERFEQ4G0M1 354 aa13.38□□□□□ -0.27
SNRPD2-201ENST00000342669 SOGA3Q5TF21 947 aa13.38□□□□□ -0.27
SNRPD2-201ENST00000342669 NBPF26B4DH59 902 aa13.37□□□□□ -0.27
SNRPD2-201ENST00000342669 RGL2O15211 777 aa13.37□□□□□ -0.27
SNRPD2-201ENST00000342669 PRPF40BQ6NWY9 871 aaKnown RBP13.37□□□□□ -0.27
SNRPD2-201ENST00000342669 NBPF10Q6P3W6 841 aaKnown RBP13.37□□□□□ -0.27
SNRPD2-201ENST00000342669 NBPF15Q8N660 670 aa13.37□□□□□ -0.27
SNRPD2-201ENST00000342669 PNISRQ8TF01 805 aaKnown RBP13.37□□□□□ -0.27
SNRPD2-201ENST00000342669 TAOK3Q9H2K8 898 aa13.37□□□□□ -0.27
SNRPD2-201ENST00000342669 MIS18AQ9NYP9 233 aa13.37□□□□□ -0.27
SNRPD2-201ENST00000342669 NIP7Q9Y221 180 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNRPD2-201ENST00000342669 KDM3BQ7LBC6 1761 aa13.36□□□□□ -0.27
SNRPD2-201ENST00000342669 HTRA3P83110 453 aa13.36□□□□□ -0.27
SNRPD2-201ENST00000342669 TPTE2Q6XPS3 522 aa13.36□□□□□ -0.27
SNRPD2-201ENST00000342669 KLRG1Q96E93 195 aa13.36□□□□□ -0.27
SNRPD2-201ENST00000342669 PNNQ9H307 717 aaKnown RBP13.36□□□□□ -0.27
SNRPD2-201ENST00000342669 LTBP3Q9NS15 1303 aa13.36□□□□□ -0.27
SNRPD2-201ENST00000342669 PCNTO95613 3336 aa13.36□□□□□ -0.27
SNRPD2-201ENST00000342669 NUP98P52948 1817 aa13.35□□□□□ -0.27
SNRPD2-201ENST00000342669 FAM177BA6PVY3 158 aa13.34□□□□□ -0.27
SNRPD2-201ENST00000342669 NPR1P16066 1061 aa13.34□□□□□ -0.27
SNRPD2-201ENST00000342669 NFE2L2Q16236 605 aa13.34□□□□□ -0.27
SNRPD2-201ENST00000342669 MAPK8IP3Q9UPT6 1336 aa13.34□□□□□ -0.27
SNRPD2-201ENST00000342669 GTF2E1P29083 439 aaPredicted RBP13.33□□□□□ -0.28
SNRPD2-201ENST00000342669 HLFQ16534 295 aa13.33□□□□□ -0.28
SNRPD2-201ENST00000342669 CCDC93Q567U6 631 aa13.33□□□□□ -0.28
SNRPD2-201ENST00000342669 NGEFQ8N5V2 710 aa13.33□□□□□ -0.28
SNRPD2-201ENST00000342669 PLEKHF1Q96S99 279 aa13.33□□□□□ -0.28
SNRPD2-201ENST00000342669 KLRG2A4D1S0 409 aaPredicted RBP13.32□□□□□ -0.28
SNRPD2-201ENST00000342669 POTECB2RU33 542 aa13.32□□□□□ -0.28
SNRPD2-201ENST00000342669 EIF4A1P60842 406 aaKnown RBP13.32□□□□□ -0.28
SNRPD2-201ENST00000342669 KIF6Q6ZMV9 814 aa13.32□□□□□ -0.28
SNRPD2-201ENST00000342669 NYXQ9GZU5 481 aa13.32□□□□□ -0.28
SNRPD2-201ENST00000342669 RRP7AQ9Y3A4 280 aaKnown RBP13.32□□□□□ -0.28
SNRPD2-201ENST00000342669 ERVV-1B6SEH8 477 aa13.31□□□□□ -0.28
SNRPD2-201ENST00000342669 ALDH1B1P30837 517 aa13.31□□□□□ -0.28
SNRPD2-201ENST00000342669 RTKN2Q8IZC4 609 aa13.31□□□□□ -0.28
SNRPD2-201ENST00000342669 JMYQ8N9B5 988 aa13.31□□□□□ -0.28
SNRPD2-201ENST00000342669 C7orf43Q8WVR3 580 aa13.31□□□□□ -0.28
SNRPD2-201ENST00000342669 THUMPD2Q9BTF0 503 aaKnown RBP13.31□□□□□ -0.28
SNRPD2-201ENST00000342669 SCN4AP35499 1836 aa13.3□□□□□ -0.28
SNRPD2-201ENST00000342669 DDNO94850 711 aaPredicted RBP13.3□□□□□ -0.28
SNRPD2-201ENST00000342669 FKBP4Q02790 459 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNRPD2-201ENST00000342669 MAP3K15Q6ZN16 1313 aa13.3□□□□□ -0.28
SNRPD2-201ENST00000342669 MYL6BP14649 208 aa13.29□□□□□ -0.28
SNRPD2-201ENST00000342669 TTLL7Q6ZT98 887 aa13.29□□□□□ -0.28
SNRPD2-201ENST00000342669 IQCA1LA6NCM1 817 aa13.28□□□□□ -0.28
SNRPD2-201ENST00000342669 RALBP1Q15311 655 aa13.28□□□□□ -0.28
SNRPD2-201ENST00000342669 CHADLQ6NUI6 762 aa13.28□□□□□ -0.28
SNRPD2-201ENST00000342669 ZNF277Q9NRM2 450 aaPredicted RBP13.28□□□□□ -0.28
SNRPD2-201ENST00000342669 TSPYL4Q9UJ04 414 aa13.28□□□□□ -0.28
SNRPD2-201ENST00000342669 GPTP24298 496 aa13.27□□□□□ -0.29
SNRPD2-201ENST00000342669 RIPK4P57078 832 aa13.27□□□□□ -0.29
SNRPD2-201ENST00000342669 OLFM4Q6UX06 510 aa13.27□□□□□ -0.29
SNRPD2-201ENST00000342669 NUTM1Q86Y26 1132 aa13.27□□□□□ -0.29
SNRPD2-201ENST00000342669 RPGRQ92834 1020 aaKnown RBP13.27□□□□□ -0.29
SNRPD2-201ENST00000342669 ZBTB3Q9H5J0 574 aa13.27□□□□□ -0.29
SNRPD2-201ENST00000342669 ERBB4Q15303 1308 aa13.27□□□□□ -0.29
SNRPD2-201ENST00000342669 IARSP41252 1262 aaKnown RBP13.26□□□□□ -0.29
SNRPD2-201ENST00000342669 CRY2Q49AN0 593 aa13.26□□□□□ -0.29
SNRPD2-201ENST00000342669 SYNE4Q8N205 404 aa13.26□□□□□ -0.29
SNRPD2-201ENST00000342669 ABCC12Q96J65 1359 aa13.26□□□□□ -0.29
SNRPD2-201ENST00000342669 L3MBTL3Q96JM7 780 aaPredicted RBP13.26□□□□□ -0.29
SNRPD2-201ENST00000342669 IBTKQ9P2D0 1353 aaPredicted RBP13.26□□□□□ -0.29
SNRPD2-201ENST00000342669 LMOD3Q0VAK6 560 aa13.25□□□□□ -0.29
SNRPD2-201ENST00000342669 SUSD4Q5VX71 490 aa13.25□□□□□ -0.29
SNRPD2-201ENST00000342669 CC2D2BQ6DHV5 1058 aa13.25□□□□□ -0.29
SNRPD2-201ENST00000342669 LDHDQ86WU2 507 aa13.25□□□□□ -0.29
SNRPD2-201ENST00000342669 TAF1DQ9H5J8 278 aaPredicted RBP13.25□□□□□ -0.29
SNRPD2-201ENST00000342669 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
SNRPD2-201ENST00000342669 RIC1Q4ADV7 1423 aa13.24□□□□□ -0.29
SNRPD2-201ENST00000342669 UBN2Q6ZU65 1347 aa13.24□□□□□ -0.29
SNRPD2-201ENST00000342669 ZNF541Q9H0D2 1346 aa13.24□□□□□ -0.29
SNRPD2-201ENST00000342669 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
SNRPD2-201ENST00000342669 POTEJP0CG39 1038 aa13.24□□□□□ -0.29
SNRPD2-201ENST00000342669 EIF2S2P20042 333 aaKnown RBP13.24□□□□□ -0.29
SNRPD2-201ENST00000342669 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
SNRPD2-201ENST00000342669 GRIPAP1Q4V328 841 aa13.24□□□□□ -0.29
SNRPD2-201ENST00000342669 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms