RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 GNL3LQ9NVN8 582 aaKnown RBP7.46□□□□□ -1.22
PRKDC-202ENST00000338368 MARCH6O60337 910 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 KLHL40Q2TBA0 621 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 IL2RBP14784 551 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 IMMTQ16891 758 aaKnown RBP7.45□□□□□ -1.22
PRKDC-202ENST00000338368 DDX17Q92841 729 aaKnown RBP7.45□□□□□ -1.22
PRKDC-202ENST00000338368 LMTK2Q8IWU2 1503 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 LRP2BPQ9P2M1 347 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 RTL1A6NKG5 1358 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 HECW2Q9P2P5 1572 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 CREBRFQ8IUR6 639 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 AIDAQ96BJ3 306 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 ATP2B1P20020 1258 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 ZNF396Q96N95 335 aaPredicted RBP7.45□□□□□ -1.22
PRKDC-202ENST00000338368 SLC52A2Q9HAB3 445 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 KIF24Q5T7B8 1368 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 KINO60870 393 aaKnown RBP7.45□□□□□ -1.22
PRKDC-202ENST00000338368 SPATA32Q96LK8 384 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 DDX11Q96FC9 970 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 ZNF652Q9Y2D9 606 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 A1BGP04217 495 aa7.45□□□□□ -1.22
PRKDC-202ENST00000338368 HMGB1P09429 215 aaKnown RBP7.45□□□□□ -1.22
PRKDC-202ENST00000338368 IL15P40933 162 aaPredicted RBP7.45□□□□□ -1.22
PRKDC-202ENST00000338368 SH2B1Q9NRF2 756 aaPredicted RBP7.45□□□□□ -1.22
PRKDC-202ENST00000338368 CFAP74Q9C0B2 1584 aa7.44□□□□□ -1.22
PRKDC-202ENST00000338368 RBM8AQ9Y5S9 174 aaKnown RBP7.44□□□□□ -1.22
PRKDC-202ENST00000338368 TPD52L1Q16890 204 aaPredicted RBP7.44□□□□□ -1.22
PRKDC-202ENST00000338368 NLRP1Q9C000 1473 aa7.44□□□□□ -1.22
PRKDC-202ENST00000338368 RAI14Q9P0K7 980 aa7.44□□□□□ -1.22
PRKDC-202ENST00000338368 RAD21O60216 631 aa7.44□□□□□ -1.22
PRKDC-202ENST00000338368 GJB2P29033 226 aa7.44□□□□□ -1.22
PRKDC-202ENST00000338368 SSH3Q8TE77 659 aa7.44□□□□□ -1.22
PRKDC-202ENST00000338368 NEK1Q96PY6 1258 aa7.44□□□□□ -1.22
PRKDC-202ENST00000338368 FBXW7Q969H0 707 aa7.44□□□□□ -1.22
PRKDC-202ENST00000338368 ZNF213O14771 459 aa7.44□□□□□ -1.22
PRKDC-202ENST00000338368 GDPD2Q9HCC8 539 aa7.44□□□□□ -1.22
PRKDC-202ENST00000338368 HOOK1Q9UJC3 728 aaKnown RBP7.44□□□□□ -1.22
PRKDC-202ENST00000338368 PHKG2P15735 406 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 CFAP45Q9UL16 551 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 STX6O43752 255 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 METTL22Q9BUU2 404 aaPredicted RBP7.43□□□□□ -1.22
PRKDC-202ENST00000338368 NGLY1Q96IV0 654 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 CCDC39Q9UFE4 941 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 NMIQ13287 307 aaPredicted RBP7.43□□□□□ -1.22
PRKDC-202ENST00000338368 MAP3K4Q9Y6R4 1608 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 SYCE3A1L190 88 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 GIGYF1O75420 1035 aaPredicted RBP7.43□□□□□ -1.22
PRKDC-202ENST00000338368 CCDC192P0DO97 292 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 TDO2P48775 406 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 PNPLA6Q8IY17 1366 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 KLHDC4Q8TBB5 520 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 CHD1O14646 1710 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 MTMR7Q9Y216 660 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 CCDC69A6NI79 296 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 PLBD2Q8NHP8 589 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 BICC1Q9H694 974 aaKnown RBP7.43□□□□□ -1.22
PRKDC-202ENST00000338368 CLTCL1P53675 1640 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 TFCP2Q12800 502 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 TCEANC2Q96MN5 208 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 NUP62CLQ9H1M0 184 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 BRMS1Q9HCU9 246 aa7.43□□□□□ -1.22
PRKDC-202ENST00000338368 PCDH11XQ9BZA7 1347 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 PCDH11YQ9BZA8 1340 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 GSPT1P15170 499 aaKnown RBP7.42□□□□□ -1.22
PRKDC-202ENST00000338368 ME1P48163 572 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 ZGPATQ8N5A5 531 aaKnown RBP7.42□□□□□ -1.22
PRKDC-202ENST00000338368 SLAIN2Q9P270 581 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 PES1O00541 588 aaKnown RBP7.42□□□□□ -1.22
PRKDC-202ENST00000338368 TRIM22Q8IYM9 498 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 SUCLG2Q96I99 432 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 TRIM5Q9C035 493 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 NAT10Q9H0A0 1025 aaKnown RBP7.42□□□□□ -1.22
PRKDC-202ENST00000338368 BTG4Q9NY30 223 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 USP16Q9Y5T5 823 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 ADGRB3O60242 1522 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 DDB1Q16531 1140 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 TET3O43151 1660 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 TNMDQ9H2S6 317 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 MAP3K12Q12852 859 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 JMYQ8N9B5 988 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 NUP133Q8WUM0 1156 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 BRF1Q92994 677 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 UQCRFS1P1P0C7P4 283 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 BEND3Q5T5X7 828 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 TRPM1Q7Z4N2 1603 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 NECAB1Q8N987 351 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 ACSBG1Q96GR2 724 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 CDC42BPAQ5VT25 1732 aa7.42□□□□□ -1.22
PRKDC-202ENST00000338368 ATP2B3Q16720 1220 aa7.41□□□□□ -1.22
PRKDC-202ENST00000338368 SCAND2PQ9GZW5 306 aaPredicted RBP7.41□□□□□ -1.22
PRKDC-202ENST00000338368 NAPBQ9H115 298 aa7.41□□□□□ -1.22
PRKDC-202ENST00000338368 ABCA9Q8IUA7 1624 aa7.41□□□□□ -1.22
PRKDC-202ENST00000338368 TMEM94Q12767 1356 aa7.41□□□□□ -1.22
PRKDC-202ENST00000338368 MCMDC2Q4G0Z9 681 aa7.41□□□□□ -1.22
PRKDC-202ENST00000338368 CAVIN4Q5BKX8 364 aa7.41□□□□□ -1.22
PRKDC-202ENST00000338368 HMG20BQ9P0W2 317 aa7.41□□□□□ -1.22
PRKDC-202ENST00000338368 TFIP11Q9UBB9 837 aaKnown RBP7.41□□□□□ -1.22
PRKDC-202ENST00000338368 CDKL5O76039 1030 aa7.41□□□□□ -1.22
PRKDC-202ENST00000338368 SLC3A2P08195 630 aaKnown RBP7.41□□□□□ -1.22
PRKDC-202ENST00000338368 GCKRQ14397 625 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms