RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-201ENST00000333371 PHRF1Q9P1Y6 1649 aaKnown RBP14.86□□□□□ -0.03
VPS33B-201ENST00000333371 WDR33Q9C0J8 1336 aaKnown RBP14.86□□□□□ -0.03
VPS33B-201ENST00000333371 RRP9O43818 475 aaKnown RBP14.85□□□□□ -0.03
VPS33B-201ENST00000333371 ADCK5Q3MIX3 580 aa14.85□□□□□ -0.03
VPS33B-201ENST00000333371 TPM2P07951 284 aa14.85□□□□□ -0.03
VPS33B-201ENST00000333371 CASTP20810 708 aaKnown RBP14.85□□□□□ -0.03
VPS33B-201ENST00000333371 PLEKHO1Q53GL0 409 aaPredicted RBP14.85□□□□□ -0.03
VPS33B-201ENST00000333371 CNTROBQ8N137 903 aa14.85□□□□□ -0.03
VPS33B-201ENST00000333371 IL17RAQ96F46 866 aa14.85□□□□□ -0.03
VPS33B-201ENST00000333371 ADCY9O60503 1353 aa14.85□□□□□ -0.03
VPS33B-201ENST00000333371 SLIT3O75094 1523 aa14.85□□□□□ -0.03
VPS33B-201ENST00000333371 CWF19L2Q2TBE0 894 aaKnown RBP14.85□□□□□ -0.03
VPS33B-201ENST00000333371 HS1BP3Q53T59 392 aa14.85□□□□□ -0.03
VPS33B-201ENST00000333371 ZNF530Q6P9A1 599 aaPredicted RBP14.85□□□□□ -0.03
VPS33B-201ENST00000333371 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.85□□□□□ -0.03
VPS33B-201ENST00000333371 ANKRD24Q8TF21 1146 aa14.85□□□□□ -0.03
VPS33B-201ENST00000333371 TRPM3Q9HCF6 1732 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-201ENST00000333371 CEMIPQ8WUJ3 1361 aa14.84□□□□□ -0.03
VPS33B-201ENST00000333371 FIBPO43427 364 aa14.84□□□□□ -0.03
VPS33B-201ENST00000333371 SYT1P21579 422 aa14.84□□□□□ -0.03
VPS33B-201ENST00000333371 ZNF830Q96NB3 372 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-201ENST00000333371 ZNF500O60304 480 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-201ENST00000333371 CCDC83Q8IWF9 413 aa14.84□□□□□ -0.03
VPS33B-201ENST00000333371 BTBD11A6QL63 1104 aa14.83□□□□□ -0.04
VPS33B-201ENST00000333371 TEFQ10587 303 aa14.83□□□□□ -0.04
VPS33B-201ENST00000333371 PRPF40BQ6NWY9 871 aaKnown RBP14.83□□□□□ -0.04
VPS33B-201ENST00000333371 TMEM94Q12767 1356 aa14.83□□□□□ -0.04
VPS33B-201ENST00000333371 PTMAP06454 111 aaKnown RBP14.83□□□□□ -0.04
VPS33B-201ENST00000333371 C1orf141Q5JVX7 400 aa14.83□□□□□ -0.04
VPS33B-201ENST00000333371 STX6O43752 255 aa14.82□□□□□ -0.04
VPS33B-201ENST00000333371 ZSCAN22P10073 491 aaPredicted RBP14.82□□□□□ -0.04
VPS33B-201ENST00000333371 AMOTQ4VCS5 1084 aa14.82□□□□□ -0.04
VPS33B-201ENST00000333371 USP25Q9UHP3 1055 aa14.82□□□□□ -0.04
VPS33B-201ENST00000333371 MAP3K2Q9Y2U5 619 aa14.82□□□□□ -0.04
VPS33B-201ENST00000333371 KDM3BQ7LBC6 1761 aa14.82□□□□□ -0.04
VPS33B-201ENST00000333371 AKAP4Q5JQC9 854 aa14.82□□□□□ -0.04
VPS33B-201ENST00000333371 JAKMIP1Q96N16 626 aaKnown RBP14.82□□□□□ -0.04
VPS33B-201ENST00000333371 DIAPH3Q9NSV4 1193 aa14.82□□□□□ -0.04
VPS33B-201ENST00000333371 LIMCH1Q9UPQ0 1083 aa14.82□□□□□ -0.04
VPS33B-201ENST00000333371 HCLS1P14317 486 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-201ENST00000333371 ZC3H6P61129 1189 aaKnown RBP14.81□□□□□ -0.04
VPS33B-201ENST00000333371 SYAP1Q96A49 352 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-201ENST00000333371 CCDC39Q9UFE4 941 aa14.81□□□□□ -0.04
VPS33B-201ENST00000333371 SMC3Q9UQE7 1217 aa14.81□□□□□ -0.04
VPS33B-201ENST00000333371 NECAB1Q8N987 351 aa14.81□□□□□ -0.04
VPS33B-201ENST00000333371 C9orf78Q9NZ63 289 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-201ENST00000333371 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.81□□□□□ -0.04
VPS33B-201ENST00000333371 TCEANC2Q96MN5 208 aa14.8□□□□□ -0.04
VPS33B-201ENST00000333371 HYPKQ9NX55 129 aa14.8□□□□□ -0.04
VPS33B-201ENST00000333371 GJB2P29033 226 aa14.8□□□□□ -0.04
VPS33B-201ENST00000333371 DNM1Q05193 864 aaKnown RBP14.8□□□□□ -0.04
VPS33B-201ENST00000333371 ST3GAL1Q11201 340 aa14.8□□□□□ -0.04
VPS33B-201ENST00000333371 FAM227BQ96M60 508 aa14.8□□□□□ -0.04
VPS33B-201ENST00000333371 RGPD5Q99666 1765 aa14.8□□□□□ -0.04
VPS33B-201ENST00000333371 GLRX3O76003 335 aaKnown RBP14.79□□□□□ -0.04
VPS33B-201ENST00000333371 F13A1P00488 732 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 AIMP1Q12904 312 aaKnown RBP14.79□□□□□ -0.04
VPS33B-201ENST00000333371 CLASRPQ8N2M8 674 aaKnown RBP14.79□□□□□ -0.04
VPS33B-201ENST00000333371 FAM13BQ9NYF5 915 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 PXDNQ92626 1479 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 LMO7Q8WWI1 1683 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 MST1RQ04912 1400 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 UQCRHLA0A096LP55 91 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 UQCRHP07919 91 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 HSPA2P54652 639 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 AACSQ86V21 672 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 VSIG10Q8N0Z9 540 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 C17orf53Q8N3J3 647 aaPredicted RBP14.79□□□□□ -0.04
VPS33B-201ENST00000333371 DDX17Q92841 729 aaKnown RBP14.79□□□□□ -0.04
VPS33B-201ENST00000333371 CCDC8Q9H0W5 538 aaPredicted RBP14.79□□□□□ -0.04
VPS33B-201ENST00000333371 AXIN2Q9Y2T1 843 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 CRYBG1Q9Y4K1 1723 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 STRCP1A6NGW2 1772 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 GIMAP6Q6P9H5 292 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 KLHDC4Q8TBB5 520 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 ARID3AQ99856 593 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 SIL1Q9H173 461 aa14.79□□□□□ -0.04
VPS33B-201ENST00000333371 TLR7Q9NYK1 1049 aaKnown RBP14.79□□□□□ -0.04
VPS33B-201ENST00000333371 MED1Q15648 1581 aaPredicted RBP14.78□□□□□ -0.04
VPS33B-201ENST00000333371 VPS37CA5D8V6 355 aaPredicted RBP14.78□□□□□ -0.04
VPS33B-201ENST00000333371 CADPS2Q86UW7 1296 aa14.78□□□□□ -0.04
VPS33B-201ENST00000333371 JARID2Q92833 1246 aaPredicted RBP14.78□□□□□ -0.04
VPS33B-201ENST00000333371 ECHDC1Q9NTX5 307 aa14.78□□□□□ -0.04
VPS33B-201ENST00000333371 PDRG1Q9NUG6 133 aa14.78□□□□□ -0.04
VPS33B-201ENST00000333371 TAF6LQ9Y6J9 622 aa14.78□□□□□ -0.04
VPS33B-201ENST00000333371 ALS2Q96Q42 1657 aa14.78□□□□□ -0.04
VPS33B-201ENST00000333371 IFIT2P09913 472 aaKnown RBP14.78□□□□□ -0.04
VPS33B-201ENST00000333371 PLCB2Q00722 1185 aa14.78□□□□□ -0.04
VPS33B-201ENST00000333371 CCDC183Q5T5S1 534 aa14.78□□□□□ -0.04
VPS33B-201ENST00000333371 FAM173BQ6P4H8 233 aa14.78□□□□□ -0.04
VPS33B-201ENST00000333371 CHMP4AQ9BY43 222 aa14.78□□□□□ -0.04
VPS33B-201ENST00000333371 CHMP3Q9Y3E7 222 aa14.78□□□□□ -0.04
VPS33B-201ENST00000333371 ME3Q16798 604 aa14.77□□□□□ -0.04
VPS33B-201ENST00000333371 TMEM87AQ8NBN3 555 aa14.77□□□□□ -0.04
VPS33B-201ENST00000333371 TTC12Q9H892 705 aaPredicted RBP14.77□□□□□ -0.04
VPS33B-201ENST00000333371 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.77□□□□□ -0.04
VPS33B-201ENST00000333371 DCCP43146 1447 aa14.77□□□□□ -0.04
VPS33B-201ENST00000333371 FERMT3Q86UX7 667 aa14.77□□□□□ -0.05
VPS33B-201ENST00000333371 KAZALD1Q96I82 304 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms