RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TNPO1Q92973 898 aaKnown RBP18.57■□□□□ 0.56
USP42-201ENST00000306177 CARD14Q9BXL6 1004 aa18.57■□□□□ 0.56
USP42-201ENST00000306177 LDHAL6AQ6ZMR3 332 aa18.57■□□□□ 0.56
USP42-201ENST00000306177 NPATQ14207 1427 aa18.57■□□□□ 0.56
USP42-201ENST00000306177 GOLGA8BA8MQT2 603 aa18.57■□□□□ 0.56
USP42-201ENST00000306177 NUCB1Q02818 461 aa18.57■□□□□ 0.56
USP42-201ENST00000306177 AXDND1Q5T1B0 1012 aaPredicted RBP18.57■□□□□ 0.56
USP42-201ENST00000306177 ZNF444Q8N0Y2 327 aaPredicted RBP18.57■□□□□ 0.56
USP42-201ENST00000306177 IFIT3O14879 490 aaKnown RBP18.56■□□□□ 0.56
USP42-201ENST00000306177 ERLIN1O75477 346 aa18.56■□□□□ 0.56
USP42-201ENST00000306177 MEIS3Q99687 375 aa18.56■□□□□ 0.56
USP42-201ENST00000306177 EPB41L2O43491 1005 aaKnown RBP18.56■□□□□ 0.56
USP42-201ENST00000306177 CHPF2Q9P2E5 772 aa18.56■□□□□ 0.56
USP42-201ENST00000306177 GOLGA8AA7E2F4 631 aa18.56■□□□□ 0.56
USP42-201ENST00000306177 C8orf58Q8NAV2 365 aa18.56■□□□□ 0.56
USP42-201ENST00000306177 FLT4P35916 1363 aa18.56■□□□□ 0.56
USP42-201ENST00000306177 ABCC1P33527 1531 aa18.56■□□□□ 0.56
USP42-201ENST00000306177 SSRP1Q08945 709 aaKnown RBP18.56■□□□□ 0.56
USP42-201ENST00000306177 SLF2Q8IX21 1173 aa18.55■□□□□ 0.56
USP42-201ENST00000306177 RPGRQ92834 1020 aaKnown RBP18.55■□□□□ 0.56
USP42-201ENST00000306177 CDC5LQ99459 802 aaKnown RBP18.55■□□□□ 0.56
USP42-201ENST00000306177 GUCY1B3Q02153 619 aa18.55■□□□□ 0.56
USP42-201ENST00000306177 ANKRD13DQ6ZTN6 518 aa18.55■□□□□ 0.56
USP42-201ENST00000306177 ZSCAN30Q86W11 494 aa18.55■□□□□ 0.56
USP42-201ENST00000306177 HMG20BQ9P0W2 317 aa18.55■□□□□ 0.56
USP42-201ENST00000306177 A0A1W2PP64 1363 aa18.55■□□□□ 0.56
USP42-201ENST00000306177 CTAGE5O15320 804 aa18.55■□□□□ 0.56
USP42-201ENST00000306177 TBC1D32Q96NH3 1257 aa18.55■□□□□ 0.56
USP42-201ENST00000306177 RHPN1Q8TCX5 695 aa18.55■□□□□ 0.56
USP42-201ENST00000306177 PIK3C2GO75747 1445 aa18.55■□□□□ 0.56
USP42-201ENST00000306177 SKIDA1Q1XH10 827 aa18.54■□□□□ 0.56
USP42-201ENST00000306177 IQCEQ6IPM2 695 aa18.54■□□□□ 0.56
USP42-201ENST00000306177 RBM10P98175 930 aaKnown RBP18.54■□□□□ 0.56
USP42-201ENST00000306177 TSHZ3Q63HK5 1081 aa18.54■□□□□ 0.56
USP42-201ENST00000306177 PCDHB15Q9Y5E8 787 aa18.54■□□□□ 0.56
USP42-201ENST00000306177 ZMYM3Q14202 1370 aa18.54■□□□□ 0.56
USP42-201ENST00000306177 GJB2P29033 226 aa18.53■□□□□ 0.56
USP42-201ENST00000306177 AKAP4Q5JQC9 854 aa18.53■□□□□ 0.56
USP42-201ENST00000306177 GOLGA6L10A6NI86 522 aa18.53■□□□□ 0.56
USP42-201ENST00000306177 SFPQP23246 707 aaKnown RBP eCLIP18.53■□□□□ 0.56
USP42-201ENST00000306177 CCT2P78371 535 aaKnown RBP18.53■□□□□ 0.56
USP42-201ENST00000306177 CCDC82Q8N4S0 544 aa18.53■□□□□ 0.56
USP42-201ENST00000306177 ARHGAP29Q52LW3 1261 aa18.53■□□□□ 0.56
USP42-201ENST00000306177 CATIPQ7Z7H3 387 aa18.53■□□□□ 0.56
USP42-201ENST00000306177 MRPL50Q8N5N7 158 aaKnown RBP18.53■□□□□ 0.56
USP42-201ENST00000306177 YTHDC2Q9H6S0 1430 aaKnown RBP18.53■□□□□ 0.56
USP42-201ENST00000306177 ZCRB1Q8TBF4 217 aaKnown RBP18.53■□□□□ 0.56
USP42-201ENST00000306177 UQCRHLA0A096LP55 91 aa18.53■□□□□ 0.56
USP42-201ENST00000306177 STX6O43752 255 aa18.53■□□□□ 0.56
USP42-201ENST00000306177 UQCRHP07919 91 aa18.53■□□□□ 0.56
USP42-201ENST00000306177 MTHFSDQ2M296 383 aaKnown RBP18.53■□□□□ 0.56
USP42-201ENST00000306177 ZNF397Q8NF99 534 aaPredicted RBP18.53■□□□□ 0.56
USP42-201ENST00000306177 NEK1Q96PY6 1258 aa18.52■□□□□ 0.56
USP42-201ENST00000306177 DDX19AQ9NUU7 478 aaKnown RBP18.52■□□□□ 0.56
USP42-201ENST00000306177 SEPT11Q9NVA2 429 aaKnown RBP18.52■□□□□ 0.56
USP42-201ENST00000306177 PBRM1Q86U86 1689 aa18.52■□□□□ 0.56
USP42-201ENST00000306177 ADGRL2O95490 1459 aa18.52■□□□□ 0.55
USP42-201ENST00000306177 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.55
USP42-201ENST00000306177 RAB34Q9BZG1 259 aa18.52■□□□□ 0.55
USP42-201ENST00000306177 SNRKQ9NRH2 765 aa18.52■□□□□ 0.55
USP42-201ENST00000306177 H0YHG0 523 aa18.52■□□□□ 0.55
USP42-201ENST00000306177 LEKR1Q6ZMV7 388 aa18.52■□□□□ 0.55
USP42-201ENST00000306177 KIAA1328Q86T90 577 aa18.52■□□□□ 0.55
USP42-201ENST00000306177 PPP1R12BO60237 982 aaPredicted RBP18.51■□□□□ 0.55
USP42-201ENST00000306177 ZFYVE9O95405 1425 aa18.51■□□□□ 0.55
USP42-201ENST00000306177 SLC39A6Q13433 755 aa18.51■□□□□ 0.55
USP42-201ENST00000306177 TNIP1Q15025 636 aa18.51■□□□□ 0.55
USP42-201ENST00000306177 KIF2AO00139 706 aaPredicted RBP18.51■□□□□ 0.55
USP42-201ENST00000306177 XAGE3Q8WTP9 111 aa18.51■□□□□ 0.55
USP42-201ENST00000306177 CCDC66A2RUB6 948 aa18.51■□□□□ 0.55
USP42-201ENST00000306177 ANKRD44Q8N8A2 993 aa18.51■□□□□ 0.55
USP42-201ENST00000306177 LARP6Q9BRS8 491 aaKnown RBP18.51■□□□□ 0.55
USP42-201ENST00000306177 CCDC194A0A1B0GVG4 234 aa18.51■□□□□ 0.55
USP42-201ENST00000306177 PER1O15534 1290 aaPredicted RBP18.5■□□□□ 0.55
USP42-201ENST00000306177 EIF3JO75822 258 aaKnown RBP18.5■□□□□ 0.55
USP42-201ENST00000306177 ALDH1L1O75891 902 aa18.5■□□□□ 0.55
USP42-201ENST00000306177 LRRC59Q96AG4 307 aaKnown RBP18.5■□□□□ 0.55
USP42-201ENST00000306177 COL17A1Q9UMD9 1497 aaPredicted RBP18.5■□□□□ 0.55
USP42-201ENST00000306177 ABCA5Q8WWZ7 1642 aa18.5■□□□□ 0.55
USP42-201ENST00000306177 NLRP5P59047 1200 aa18.5■□□□□ 0.55
USP42-201ENST00000306177 USP16Q9Y5T5 823 aa18.5■□□□□ 0.55
USP42-201ENST00000306177 UQCRFS1P1P0C7P4 283 aa18.5■□□□□ 0.55
USP42-201ENST00000306177 SDSP20132 328 aa18.5■□□□□ 0.55
USP42-201ENST00000306177 KLHL10Q6JEL2 608 aa18.5■□□□□ 0.55
USP42-201ENST00000306177 COPS6Q7L5N1 327 aa18.5■□□□□ 0.55
USP42-201ENST00000306177 NCOA7Q8NI08 942 aa18.5■□□□□ 0.55
USP42-201ENST00000306177 LDHCP07864 332 aa18.49■□□□□ 0.55
USP42-201ENST00000306177 KCNA6P17658 529 aa18.49■□□□□ 0.55
USP42-201ENST00000306177 IARSP41252 1262 aaKnown RBP18.49■□□□□ 0.55
USP42-201ENST00000306177 CCDC96Q2M329 555 aa18.49■□□□□ 0.55
USP42-201ENST00000306177 MAST1Q9Y2H9 1570 aa18.49■□□□□ 0.55
USP42-201ENST00000306177 TMEM266Q2M3C6 531 aa18.49■□□□□ 0.55
USP42-201ENST00000306177 TMEM67Q5HYA8 995 aa18.49■□□□□ 0.55
USP42-201ENST00000306177 FSIP1Q8NA03 581 aa18.49■□□□□ 0.55
USP42-201ENST00000306177 CNNM3Q8NE01 707 aa18.49■□□□□ 0.55
USP42-201ENST00000306177 NCKAP5LQ9HCH0 1330 aa18.49■□□□□ 0.55
USP42-201ENST00000306177 ATP7AQ04656 1500 aa18.49■□□□□ 0.55
USP42-201ENST00000306177 ZSCAN12O43309 604 aa18.49■□□□□ 0.55
USP42-201ENST00000306177 DDX46Q7L014 1031 aaKnown RBP18.49■□□□□ 0.55
USP42-201ENST00000306177 TSG101Q99816 390 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms