RNA–Protein interactions for RNA: ENST00000301453.7

OTUB1-201, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,493 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-201ENST00000301453 TEFQ10587 303 aa19.64■□□□□ 0.73
OTUB1-201ENST00000301453 HSP90AB4PQ58FF6 505 aa19.64■□□□□ 0.73
OTUB1-201ENST00000301453 CASTP20810 708 aaKnown RBP19.63■□□□□ 0.73
OTUB1-201ENST00000301453 OS9Q13438 667 aaPredicted RBP19.63■□□□□ 0.73
OTUB1-201ENST00000301453 AKAP4Q5JQC9 854 aa19.63■□□□□ 0.73
OTUB1-201ENST00000301453 SYAP1Q96A49 352 aaPredicted RBP19.63■□□□□ 0.73
OTUB1-201ENST00000301453 HYPKQ9NX55 129 aa19.63■□□□□ 0.73
OTUB1-201ENST00000301453 MAP3K2Q9Y2U5 619 aa19.63■□□□□ 0.73
OTUB1-201ENST00000301453 STX6O43752 255 aa19.63■□□□□ 0.73
OTUB1-201ENST00000301453 CWF19L2Q2TBE0 894 aaKnown RBP19.62■□□□□ 0.73
OTUB1-201ENST00000301453 CCDC39Q9UFE4 941 aa19.62■□□□□ 0.73
OTUB1-201ENST00000301453 R3HCC1Q9Y3T6 440 aaKnown RBP19.62■□□□□ 0.73
OTUB1-201ENST00000301453 PXDNQ92626 1479 aa19.62■□□□□ 0.73
OTUB1-201ENST00000301453 TPRNQ4KMQ1 711 aa19.62■□□□□ 0.73
OTUB1-201ENST00000301453 DBF4Q9UBU7 674 aaPredicted RBP19.62■□□□□ 0.73
OTUB1-201ENST00000301453 LMO7Q8WWI1 1683 aa19.61■□□□□ 0.73
OTUB1-201ENST00000301453 RNMTO43148 476 aaKnown RBP19.61■□□□□ 0.73
OTUB1-201ENST00000301453 CLASRPQ8N2M8 674 aaKnown RBP19.61■□□□□ 0.73
OTUB1-201ENST00000301453 DIAPH3Q9NSV4 1193 aa19.61■□□□□ 0.73
OTUB1-201ENST00000301453 ST3GAL1Q11201 340 aa19.61■□□□□ 0.73
OTUB1-201ENST00000301453 COL9A3Q14050 684 aaPredicted RBP19.61■□□□□ 0.73
OTUB1-201ENST00000301453 PRPF40BQ6NWY9 871 aaKnown RBP19.61■□□□□ 0.73
OTUB1-201ENST00000301453 ECHDC1Q9NTX5 307 aa19.61■□□□□ 0.73
OTUB1-201ENST00000301453 GIGYF1O75420 1035 aaPredicted RBP19.6■□□□□ 0.73
OTUB1-201ENST00000301453 F13A1P00488 732 aa19.6■□□□□ 0.73
OTUB1-201ENST00000301453 DDX54Q8TDD1 881 aaKnown RBP19.6■□□□□ 0.73
OTUB1-201ENST00000301453 PDCL3Q9H2J4 239 aa19.6■□□□□ 0.73
OTUB1-201ENST00000301453 C9orf78Q9NZ63 289 aaPredicted RBP19.6■□□□□ 0.73
OTUB1-201ENST00000301453 CCDC83Q8IWF9 413 aa19.6■□□□□ 0.73
OTUB1-201ENST00000301453 KAZALD1Q96I82 304 aa19.6■□□□□ 0.73
OTUB1-201ENST00000301453 SMC3Q9UQE7 1217 aa19.6■□□□□ 0.73
OTUB1-201ENST00000301453 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.6■□□□□ 0.73
OTUB1-201ENST00000301453 FER1L4A9Z1Z3 1794 aa19.59■□□□□ 0.73
OTUB1-201ENST00000301453 MCM5P33992 734 aa19.59■□□□□ 0.73
OTUB1-201ENST00000301453 TERF1P54274 439 aa19.59■□□□□ 0.73
OTUB1-201ENST00000301453 PLEKHO1Q53GL0 409 aaPredicted RBP19.59■□□□□ 0.73
OTUB1-201ENST00000301453 KSR2Q6VAB6 950 aa19.59■□□□□ 0.73
OTUB1-201ENST00000301453 KCNB2Q92953 911 aa19.59■□□□□ 0.73
OTUB1-201ENST00000301453 JAKMIP1Q96N16 626 aaKnown RBP19.59■□□□□ 0.73
OTUB1-201ENST00000301453 ALDH1L1O75891 902 aa19.59■□□□□ 0.73
OTUB1-201ENST00000301453 HEG1Q9ULI3 1381 aa19.59■□□□□ 0.73
OTUB1-201ENST00000301453 PHF14O94880 888 aa19.58■□□□□ 0.73
OTUB1-201ENST00000301453 NECTIN1Q15223 517 aa19.58■□□□□ 0.73
OTUB1-201ENST00000301453 CCDC183Q5T5S1 534 aa19.58■□□□□ 0.73
OTUB1-201ENST00000301453 ZSWIM6Q9HCJ5 1215 aa19.58■□□□□ 0.73
OTUB1-201ENST00000301453 PDRG1Q9NUG6 133 aa19.58■□□□□ 0.73
OTUB1-201ENST00000301453 SASH1O94885 1247 aa19.58■□□□□ 0.72
OTUB1-201ENST00000301453 GJB2P29033 226 aa19.58■□□□□ 0.72
OTUB1-201ENST00000301453 PSME1Q06323 249 aa19.58■□□□□ 0.72
OTUB1-201ENST00000301453 ESCO1Q5FWF5 840 aa19.58■□□□□ 0.72
OTUB1-201ENST00000301453 FIBPO43427 364 aa19.57■□□□□ 0.72
OTUB1-201ENST00000301453 VPS53Q5VIR6 699 aa19.57■□□□□ 0.72
OTUB1-201ENST00000301453 AACSQ86V21 672 aa19.57■□□□□ 0.72
OTUB1-201ENST00000301453 MPNDQ8N594 471 aa19.57■□□□□ 0.72
OTUB1-201ENST00000301453 RUFY2Q8WXA3 655 aa19.57■□□□□ 0.72
OTUB1-201ENST00000301453 SUCLG2Q96I99 432 aa19.57■□□□□ 0.72
OTUB1-201ENST00000301453 CHMP4AQ9BY43 222 aa19.57■□□□□ 0.72
OTUB1-201ENST00000301453 ZMYND15Q9H091 742 aa19.57■□□□□ 0.72
OTUB1-201ENST00000301453 MTMR6Q9Y217 621 aa19.57■□□□□ 0.72
OTUB1-201ENST00000301453 IFIT2P09913 472 aaKnown RBP19.57■□□□□ 0.72
OTUB1-201ENST00000301453 UBE2HP62256 183 aa19.57■□□□□ 0.72
OTUB1-201ENST00000301453 FAM227BQ96M60 508 aa19.57■□□□□ 0.72
OTUB1-201ENST00000301453 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.57■□□□□ 0.723e-7■□□□□ 8.4
OTUB1-201ENST00000301453 EAF2Q96CJ1 260 aaPredicted RBP19.56■□□□□ 0.72
OTUB1-201ENST00000301453 DNM1Q05193 864 aaKnown RBP19.56■□□□□ 0.72
OTUB1-201ENST00000301453 ME3Q16798 604 aa19.56■□□□□ 0.72
OTUB1-201ENST00000301453 KCNH5Q8NCM2 988 aa19.56■□□□□ 0.72
OTUB1-201ENST00000301453 TM6SF1Q9BZW5 370 aa19.56■□□□□ 0.72
OTUB1-201ENST00000301453 EVI5LQ96CN4 794 aa19.55■□□□□ 0.72
OTUB1-201ENST00000301453 PKNOX2Q96KN3 472 aa19.55■□□□□ 0.72
OTUB1-201ENST00000301453 USP25Q9UHP3 1055 aa19.55■□□□□ 0.72
OTUB1-201ENST00000301453 CCDC171Q6TFL3 1326 aa19.55■□□□□ 0.72
OTUB1-201ENST00000301453 HCLS1P14317 486 aaPredicted RBP19.54■□□□□ 0.72
OTUB1-201ENST00000301453 AMOTQ4VCS5 1084 aa19.54■□□□□ 0.72
OTUB1-201ENST00000301453 NECAB1Q8N987 351 aa19.54■□□□□ 0.72
OTUB1-201ENST00000301453 CCDC8Q9H0W5 538 aaPredicted RBP19.54■□□□□ 0.72
OTUB1-201ENST00000301453 BICC1Q9H694 974 aaKnown RBP19.54■□□□□ 0.72
OTUB1-201ENST00000301453 TLR7Q9NYK1 1049 aaKnown RBP19.54■□□□□ 0.72
OTUB1-201ENST00000301453 ARHGEF25Q86VW2 580 aa19.54■□□□□ 0.72
OTUB1-201ENST00000301453 RBM8AQ9Y5S9 174 aaKnown RBP19.54■□□□□ 0.72
OTUB1-201ENST00000301453 CYP46A1Q9Y6A2 500 aa19.54■□□□□ 0.72
OTUB1-201ENST00000301453 GCP02774 474 aa19.53■□□□□ 0.72
OTUB1-201ENST00000301453 NMIQ13287 307 aaPredicted RBP19.53■□□□□ 0.72
OTUB1-201ENST00000301453 UVSSAQ2YD98 709 aa19.53■□□□□ 0.72
OTUB1-201ENST00000301453 C1orf141Q5JVX7 400 aa19.53■□□□□ 0.72
OTUB1-201ENST00000301453 FAM184AQ8NB25 1140 aa19.53■□□□□ 0.72
OTUB1-201ENST00000301453 CHD2O14647 1828 aaKnown RBP19.53■□□□□ 0.72
OTUB1-201ENST00000301453 PHRF1Q9P1Y6 1649 aaKnown RBP19.53■□□□□ 0.72
OTUB1-201ENST00000301453 GRM8O00222 908 aa19.53■□□□□ 0.72
OTUB1-201ENST00000301453 PTMAP06454 111 aaKnown RBP19.53■□□□□ 0.72
OTUB1-201ENST00000301453 NCAPD2Q15021 1401 aa19.53■□□□□ 0.72
OTUB1-201ENST00000301453 PDIA6Q15084 440 aa19.53■□□□□ 0.72
OTUB1-201ENST00000301453 CREB3L3Q68CJ9 461 aa19.53■□□□□ 0.72
OTUB1-201ENST00000301453 ERC1Q8IUD2 1116 aa19.53■□□□□ 0.72
OTUB1-201ENST00000301453 ZNF830Q96NB3 372 aaPredicted RBP19.53■□□□□ 0.72
OTUB1-201ENST00000301453 FUCA2Q9BTY2 467 aa19.53■□□□□ 0.72
OTUB1-201ENST00000301453 ADGRL3Q9HAR2 1447 aa19.53■□□□□ 0.72
OTUB1-201ENST00000301453 TPCN1Q9ULQ1 816 aa19.53■□□□□ 0.72
OTUB1-201ENST00000301453 RBM10P98175 930 aaKnown RBP19.52■□□□□ 0.72
OTUB1-201ENST00000301453 AIMP1Q12904 312 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms