RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 DDB1Q16531 1140 aa7.86□□□□□ -1.15
SSX3-201ENST00000298396 MTHFSDQ2M296 383 aaKnown RBP7.86□□□□□ -1.15
SSX3-201ENST00000298396 VARS2Q5ST30 1063 aaKnown RBP7.86□□□□□ -1.15
SSX3-201ENST00000298396 PTF1AQ7RTS3 328 aa7.86□□□□□ -1.15
SSX3-201ENST00000298396 KRT27Q7Z3Y8 459 aa7.86□□□□□ -1.15
SSX3-201ENST00000298396 CCDC146Q8IYE0 955 aa7.86□□□□□ -1.15
SSX3-201ENST00000298396 ZCRB1Q8TBF4 217 aaKnown RBP7.86□□□□□ -1.15
SSX3-201ENST00000298396 NUDCQ9Y266 331 aa7.86□□□□□ -1.15
SSX3-201ENST00000298396 RREB1Q92766 1687 aa7.86□□□□□ -1.15
SSX3-201ENST00000298396 TUBGCP6Q96RT7 1819 aa7.85□□□□□ -1.15
SSX3-201ENST00000298396 PCDH11XQ9BZA7 1347 aa7.85□□□□□ -1.15
SSX3-201ENST00000298396 PCDH11YQ9BZA8 1340 aa7.85□□□□□ -1.15
SSX3-201ENST00000298396 PHKG2P15735 406 aa7.85□□□□□ -1.15
SSX3-201ENST00000298396 HS3ST6Q96QI5 342 aa7.85□□□□□ -1.15
SSX3-201ENST00000298396 SLC4A5Q9BY07 1137 aa7.85□□□□□ -1.15
SSX3-201ENST00000298396 TJP1Q07157 1748 aa7.84□□□□□ -1.15
SSX3-201ENST00000298396 NUP188Q5SRE5 1749 aa7.84□□□□□ -1.15
SSX3-201ENST00000298396 C5P01031 1676 aa7.84□□□□□ -1.15
SSX3-201ENST00000298396 SENP3-EIF4A1A0A087X0R7 540 aa7.84□□□□□ -1.15
SSX3-201ENST00000298396 A0A0G2JS52 829 aa7.84□□□□□ -1.15
SSX3-201ENST00000298396 EXOC5O00471 708 aa7.84□□□□□ -1.15
SSX3-201ENST00000298396 COL9A1P20849 921 aa7.84□□□□□ -1.15
SSX3-201ENST00000298396 PTPREP23469 700 aa7.84□□□□□ -1.15
SSX3-201ENST00000298396 MYT1Q01538 1121 aa7.84□□□□□ -1.15
SSX3-201ENST00000298396 MAP2K5Q13163 448 aa7.84□□□□□ -1.15
SSX3-201ENST00000298396 WDR43Q15061 677 aaKnown RBP eCLIP7.84□□□□□ -1.15
SSX3-201ENST00000298396 ZNF530Q6P9A1 599 aaPredicted RBP7.84□□□□□ -1.15
SSX3-201ENST00000298396 DDX54Q8TDD1 881 aaKnown RBP7.84□□□□□ -1.15
SSX3-201ENST00000298396 MYH14Q7Z406 1995 aaKnown RBP7.84□□□□□ -1.15
SSX3-201ENST00000298396 COL5A3P25940 1745 aaPredicted RBP7.83□□□□□ -1.16
SSX3-201ENST00000298396 CICQ96RK0 1608 aaPredicted RBP7.83□□□□□ -1.16
SSX3-201ENST00000298396 PLEKHO1Q53GL0 409 aaPredicted RBP7.83□□□□□ -1.16
SSX3-201ENST00000298396 FAM9BQ8IZU0 186 aa7.83□□□□□ -1.16
SSX3-201ENST00000298396 SPG7Q9UQ90 795 aa7.83□□□□□ -1.16
SSX3-201ENST00000298396 CEMIPQ8WUJ3 1361 aa7.83□□□□□ -1.16
SSX3-201ENST00000298396 MAP3K5Q99683 1374 aa7.83□□□□□ -1.16
SSX3-201ENST00000298396 ZNF831Q5JPB2 1677 aa7.83□□□□□ -1.16
SSX3-201ENST00000298396 FAM205CA6NFA0 338 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 ARHGAP33O14559 1287 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 KCNQ2O43526 872 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 TMPOP42166 694 aaKnown RBP7.82□□□□□ -1.16
SSX3-201ENST00000298396 PRSS12P56730 875 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 PDE3BQ13370 1112 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 NFE2L2Q16236 605 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 AMOTQ4VCS5 1084 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 AKAP4Q5JQC9 854 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 MPRIPQ6WCQ1 1025 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 IFNL2Q8IZJ0 200 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 IL17REQ8NFR9 667 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 RUNDC1Q96C34 613 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 LGR6Q9HBX8 967 aa7.82□□□□□ -1.16
SSX3-201ENST00000298396 RRP7AQ9Y3A4 280 aaKnown RBP7.82□□□□□ -1.16
SSX3-201ENST00000298396 APAF1O14727 1248 aa7.81□□□□□ -1.16
SSX3-201ENST00000298396 FECHP22830 423 aa7.81□□□□□ -1.16
SSX3-201ENST00000298396 DCTN1Q14203 1278 aa7.81□□□□□ -1.16
SSX3-201ENST00000298396 GAS2L2Q8NHY3 880 aa7.81□□□□□ -1.16
SSX3-201ENST00000298396 ACSBG1Q96GR2 724 aa7.81□□□□□ -1.16
SSX3-201ENST00000298396 ZBED2Q9BTP6 218 aa7.81□□□□□ -1.16
SSX3-201ENST00000298396 KCPQ6ZWJ8 1503 aa7.81□□□□□ -1.16
SSX3-201ENST00000298396 LAMB4A4D0S4 1761 aa7.81□□□□□ -1.16
SSX3-201ENST00000298396 RNMTO43148 476 aaKnown RBP7.8□□□□□ -1.16
SSX3-201ENST00000298396 FAM196AQ6ZSG2 479 aa7.8□□□□□ -1.16
SSX3-201ENST00000298396 MCM10Q7L590 875 aa7.8□□□□□ -1.16
SSX3-201ENST00000298396 CDCA7LQ96GN5 454 aa7.8□□□□□ -1.16
SSX3-201ENST00000298396 THUMPD2Q9BTF0 503 aaKnown RBP7.8□□□□□ -1.16
SSX3-201ENST00000298396 FAM198AQ9UFP1 575 aa7.8□□□□□ -1.16
SSX3-201ENST00000298396 UBR3Q6ZT12 1888 aa7.8□□□□□ -1.16
SSX3-201ENST00000298396 MAPK8IP3Q9UPT6 1336 aa7.79□□□□□ -1.16
SSX3-201ENST00000298396 GNAT3A8MTJ3 354 aa7.79□□□□□ -1.16
SSX3-201ENST00000298396 IRF6O14896 467 aa7.79□□□□□ -1.16
SSX3-201ENST00000298396 TRIM37O94972 964 aa7.79□□□□□ -1.16
SSX3-201ENST00000298396 RIPK4P57078 832 aa7.79□□□□□ -1.16
SSX3-201ENST00000298396 C1orf141Q5JVX7 400 aa7.79□□□□□ -1.16
SSX3-201ENST00000298396 PADI6Q6TGC4 694 aa7.79□□□□□ -1.16
SSX3-201ENST00000298396 PIGBQ92521 554 aa7.79□□□□□ -1.16
SSX3-201ENST00000298396 DCAF5Q96JK2 942 aa7.79□□□□□ -1.16
SSX3-201ENST00000298396 KCNK17Q96T54 332 aa7.79□□□□□ -1.16
SSX3-201ENST00000298396 SLC24A3Q9HC58 644 aa7.79□□□□□ -1.16
SSX3-201ENST00000298396 QSER1Q2KHR3 1735 aa7.78□□□□□ -1.16
SSX3-201ENST00000298396 TRIM6-TRIM34B2RNG4 842 aa7.78□□□□□ -1.16
SSX3-201ENST00000298396 NEUROD2Q15784 382 aa7.78□□□□□ -1.16
SSX3-201ENST00000298396 CCDC102AQ96A19 550 aa7.78□□□□□ -1.16
SSX3-201ENST00000298396 AK7Q96M32 723 aa7.78□□□□□ -1.16
SSX3-201ENST00000298396 PNNQ9H307 717 aaKnown RBP7.78□□□□□ -1.16
SSX3-201ENST00000298396 CACNA1FO60840 1977 aa7.78□□□□□ -1.16
SSX3-201ENST00000298396 ZNF521Q96K83 1311 aa7.78□□□□□ -1.16
SSX3-201ENST00000298396 ERVV-2B6SEH9 535 aa7.77□□□□□ -1.17
SSX3-201ENST00000298396 KCNQ3O43525 872 aa7.77□□□□□ -1.17
SSX3-201ENST00000298396 HTATSF1O43719 755 aaKnown RBP7.77□□□□□ -1.17
SSX3-201ENST00000298396 HSP90AB1P08238 724 aaKnown RBP7.77□□□□□ -1.17
SSX3-201ENST00000298396 PSEN2P49810 448 aa7.77□□□□□ -1.17
SSX3-201ENST00000298396 NFATC2IPQ8NCF5 419 aa7.77□□□□□ -1.17
SSX3-201ENST00000298396 SLC52A2Q9HAB3 445 aa7.77□□□□□ -1.17
SSX3-201ENST00000298396 TSKSQ9UJT2 592 aa7.77□□□□□ -1.17
SSX3-201ENST00000298396 ASAP1Q9ULH1 1129 aa7.77□□□□□ -1.17
SSX3-201ENST00000298396 ADGRG1Q9Y653 693 aa7.77□□□□□ -1.17
SSX3-201ENST00000298396 C4AP0C0L4 1744 aa7.77□□□□□ -1.17
SSX3-201ENST00000298396 C4BP0C0L5 1744 aa7.77□□□□□ -1.17
SSX3-201ENST00000298396 TK2O00142 265 aa7.76□□□□□ -1.17
SSX3-201ENST00000298396 SLC39A6Q13433 755 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms