RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 FAM177A1Q8N128 213 aaPredicted RBP20.33■□□□□ 0.85
PCDHA13-201ENST00000289272 KIF4BQ2VIQ3 1234 aa20.33■□□□□ 0.84
PCDHA13-201ENST00000289272 ZNF165P49910 485 aa20.33■□□□□ 0.84
PCDHA13-201ENST00000289272 IRX3P78415 501 aaPredicted RBP20.33■□□□□ 0.84
PCDHA13-201ENST00000289272 ODF2Q5BJF6 829 aa20.33■□□□□ 0.84
PCDHA13-201ENST00000289272 ZSCAN16Q9H4T2 348 aaPredicted RBP20.33■□□□□ 0.84
PCDHA13-201ENST00000289272 BRPF1P55201 1214 aaPredicted RBP20.32■□□□□ 0.84
PCDHA13-201ENST00000289272 KIAA1328Q86T90 577 aa20.32■□□□□ 0.84
PCDHA13-201ENST00000289272 RRAGDQ9NQL2 400 aaPredicted RBP20.32■□□□□ 0.84
PCDHA13-201ENST00000289272 CEP126Q9P2H0 1117 aa20.32■□□□□ 0.84
PCDHA13-201ENST00000289272 ZNF652Q9Y2D9 606 aa20.32■□□□□ 0.84
PCDHA13-201ENST00000289272 SPDYE4A6NLX3 237 aa20.32■□□□□ 0.84
PCDHA13-201ENST00000289272 EHBP1Q8NDI1 1231 aa20.32■□□□□ 0.84
PCDHA13-201ENST00000289272 ARFGAP3Q9NP61 516 aa20.31■□□□□ 0.84
PCDHA13-201ENST00000289272 ZSCAN22P10073 491 aaPredicted RBP20.31■□□□□ 0.84
PCDHA13-201ENST00000289272 FLIIQ13045 1269 aa20.31■□□□□ 0.84
PCDHA13-201ENST00000289272 TAF4BQ92750 862 aa20.31■□□□□ 0.84
PCDHA13-201ENST00000289272 PHAXQ9H814 394 aaKnown RBP20.31■□□□□ 0.84
PCDHA13-201ENST00000289272 CAMK4Q16566 473 aa20.31■□□□□ 0.84
PCDHA13-201ENST00000289272 INTS4Q96HW7 963 aaKnown RBP20.31■□□□□ 0.84
PCDHA13-201ENST00000289272 LRRFIP2Q9Y608 721 aaKnown RBP20.31■□□□□ 0.84
PCDHA13-201ENST00000289272 DNAAF4Q8WXU2 420 aa20.3■□□□□ 0.84
PCDHA13-201ENST00000289272 CARD14Q9BXL6 1004 aa20.3■□□□□ 0.84
PCDHA13-201ENST00000289272 ZNF445P59923 1031 aa20.3■□□□□ 0.84
PCDHA13-201ENST00000289272 LARP1Q6PKG0 1096 aaKnown RBP20.3■□□□□ 0.84
PCDHA13-201ENST00000289272 GCC2Q8IWJ2 1684 aa20.3■□□□□ 0.84
PCDHA13-201ENST00000289272 ZC3H6P61129 1189 aaKnown RBP20.3■□□□□ 0.84
PCDHA13-201ENST00000289272 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.3■□□□□ 0.84
PCDHA13-201ENST00000289272 NPC1L1Q9UHC9 1359 aa20.29■□□□□ 0.84
PCDHA13-201ENST00000289272 FAM83GA6ND36 823 aa20.29■□□□□ 0.84
PCDHA13-201ENST00000289272 MYRIPQ8NFW9 859 aa20.29■□□□□ 0.84
PCDHA13-201ENST00000289272 ABCC10Q5T3U5 1492 aa20.29■□□□□ 0.84
PCDHA13-201ENST00000289272 CCAR1Q8IX12 1150 aaKnown RBP20.29■□□□□ 0.84
PCDHA13-201ENST00000289272 FAM177BA6PVY3 158 aa20.29■□□□□ 0.84
PCDHA13-201ENST00000289272 LMAN1P49257 510 aa20.29■□□□□ 0.84
PCDHA13-201ENST00000289272 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
PCDHA13-201ENST00000289272 UHRF1BP1LA0JNW5 1464 aa20.29■□□□□ 0.84
PCDHA13-201ENST00000289272 EIF4G3O43432 1585 aaKnown RBP20.28■□□□□ 0.84
PCDHA13-201ENST00000289272 CDK5RAP3Q96JB5 506 aa20.28■□□□□ 0.84
PCDHA13-201ENST00000289272 PBRM1Q86U86 1689 aa20.28■□□□□ 0.84
PCDHA13-201ENST00000289272 SPA17Q15506 151 aa20.28■□□□□ 0.84
PCDHA13-201ENST00000289272 CADPS2Q86UW7 1296 aa20.28■□□□□ 0.84
PCDHA13-201ENST00000289272 HMG20BQ9P0W2 317 aa20.28■□□□□ 0.84
PCDHA13-201ENST00000289272 PYM1Q9BRP8 204 aaKnown RBP20.27■□□□□ 0.84
PCDHA13-201ENST00000289272 NAA15Q9BXJ9 866 aaKnown RBP20.27■□□□□ 0.84
PCDHA13-201ENST00000289272 TMOD3Q9NYL9 352 aa20.27■□□□□ 0.84
PCDHA13-201ENST00000289272 TTC21AQ8NDW8 1320 aa20.27■□□□□ 0.84
PCDHA13-201ENST00000289272 CENPHQ9H3R5 247 aa20.27■□□□□ 0.84
PCDHA13-201ENST00000289272 CKAP4Q07065 602 aaKnown RBP20.27■□□□□ 0.83
PCDHA13-201ENST00000289272 U3KPZ7 1027 aaPredicted RBP20.27■□□□□ 0.83
PCDHA13-201ENST00000289272 RBM27Q9P2N5 1060 aaKnown RBP20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 IGHMBP2P38935 993 aaKnown RBP20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 KLHL34Q8N239 644 aa20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 CCDC69A6NI79 296 aa20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 USO1O60763 962 aaKnown RBP20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 PAFAH1B1P43034 410 aa20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 TMX3Q96JJ7 454 aa20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 AKAP2Q9Y2D5 859 aa20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 ACEP12821 1306 aa20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 HCLS1P14317 486 aaPredicted RBP20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 USHBP1Q8N6Y0 703 aa20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 CEP112Q8N8E3 955 aa20.26■□□□□ 0.83
PCDHA13-201ENST00000289272 YEATS4O95619 227 aa20.25■□□□□ 0.83
PCDHA13-201ENST00000289272 KANK3Q6NY19 840 aa20.25■□□□□ 0.83
PCDHA13-201ENST00000289272 DYDC1Q8WWB3 177 aa20.25■□□□□ 0.83
PCDHA13-201ENST00000289272 DBF4Q9UBU7 674 aaPredicted RBP20.25■□□□□ 0.83
PCDHA13-201ENST00000289272 KDM4AO75164 1064 aa20.25■□□□□ 0.83
PCDHA13-201ENST00000289272 MRPL50Q8N5N7 158 aaKnown RBP20.25■□□□□ 0.83
PCDHA13-201ENST00000289272 TEX13AQ9BXU3 409 aaPredicted RBP20.25■□□□□ 0.83
PCDHA13-201ENST00000289272 RASSF4Q9H2L5 321 aa20.25■□□□□ 0.83
PCDHA13-201ENST00000289272 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
PCDHA13-201ENST00000289272 FKBP4Q02790 459 aaKnown RBP eCLIP20.24■□□□□ 0.83
PCDHA13-201ENST00000289272 GIGYF2Q6Y7W6 1299 aaKnown RBP20.24■□□□□ 0.83
PCDHA13-201ENST00000289272 ERO1AQ96HE7 468 aa20.24■□□□□ 0.83
PCDHA13-201ENST00000289272 MAGI3Q5TCQ9 1506 aa20.24■□□□□ 0.83
PCDHA13-201ENST00000289272 FBLN1P23142 703 aa20.24■□□□□ 0.83
PCDHA13-201ENST00000289272 GJB2P29033 226 aa20.24■□□□□ 0.83
PCDHA13-201ENST00000289272 TMC6Q7Z403 805 aa20.24■□□□□ 0.83
PCDHA13-201ENST00000289272 KDM2BQ8NHM5 1336 aa20.24■□□□□ 0.83
PCDHA13-201ENST00000289272 ZMYM4Q5VZL5 1548 aa20.24■□□□□ 0.83
PCDHA13-201ENST00000289272 RLBP1P12271 317 aa20.24■□□□□ 0.83
PCDHA13-201ENST00000289272 SYCP1Q15431 976 aa20.24■□□□□ 0.83
PCDHA13-201ENST00000289272 MAST1Q9Y2H9 1570 aa20.23■□□□□ 0.83
PCDHA13-201ENST00000289272 ATP2B1P20020 1258 aa20.23■□□□□ 0.83
PCDHA13-201ENST00000289272 PIBF1Q8WXW3 757 aa20.23■□□□□ 0.83
PCDHA13-201ENST00000289272 SKILP12757 684 aa20.23■□□□□ 0.83
PCDHA13-201ENST00000289272 EIF5P55010 431 aaKnown RBP20.23■□□□□ 0.83
PCDHA13-201ENST00000289272 IKQ13123 557 aaPredicted RBP20.23■□□□□ 0.83
PCDHA13-201ENST00000289272 HYPKQ9NX55 129 aa20.23■□□□□ 0.83
PCDHA13-201ENST00000289272 TUBB2AQ13885 445 aa20.22■□□□□ 0.83
PCDHA13-201ENST00000289272 TUBB2BQ9BVA1 445 aa20.22■□□□□ 0.83
PCDHA13-201ENST00000289272 TRMT1Q9NXH9 659 aaKnown RBP20.22■□□□□ 0.83
PCDHA13-201ENST00000289272 PIK3R4Q99570 1358 aa20.22■□□□□ 0.83
PCDHA13-201ENST00000289272 ZNF500O60304 480 aaPredicted RBP20.22■□□□□ 0.83
PCDHA13-201ENST00000289272 SEPT7Q16181 437 aaKnown RBP20.22■□□□□ 0.83
PCDHA13-201ENST00000289272 TTC31Q49AM3 519 aaPredicted RBP20.22■□□□□ 0.83
PCDHA13-201ENST00000289272 MNAT1P51948 309 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 POLKQ9UBT6 870 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 TNNQ9UQP3 1299 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms