RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 STX6O43752 255 aa11.99□□□□□ -0.49
HMGCR-201ENST00000287936 HSPA4P34932 840 aa11.99□□□□□ -0.49
HMGCR-201ENST00000287936 CCDC83Q8IWF9 413 aa11.99□□□□□ -0.49
HMGCR-201ENST00000287936 DIP2AQ14689 1571 aa11.98□□□□□ -0.49
HMGCR-201ENST00000287936 LARP1BQ659C4 914 aaKnown RBP11.98□□□□□ -0.49
HMGCR-201ENST00000287936 MYD88Q99836 296 aa11.98□□□□□ -0.49
HMGCR-201ENST00000287936 HS1BP3Q53T59 392 aa11.98□□□□□ -0.49
HMGCR-201ENST00000287936 IFNL2Q8IZJ0 200 aa11.98□□□□□ -0.49
HMGCR-201ENST00000287936 ZNF330Q9Y3S2 320 aaPredicted RBP11.98□□□□□ -0.49
HMGCR-201ENST00000287936 TPM3P06753 285 aa11.98□□□□□ -0.49
HMGCR-201ENST00000287936 NBPF7P0C2Y1 421 aaPredicted RBP11.98□□□□□ -0.49
HMGCR-201ENST00000287936 ZSCAN22P10073 491 aaPredicted RBP11.98□□□□□ -0.49
HMGCR-201ENST00000287936 BEND3Q5T5X7 828 aa11.98□□□□□ -0.49
HMGCR-201ENST00000287936 DNAJC2Q99543 621 aaKnown RBP11.98□□□□□ -0.49
HMGCR-201ENST00000287936 CCDC8Q9H0W5 538 aaPredicted RBP11.98□□□□□ -0.49
HMGCR-201ENST00000287936 DDX21Q9NR30 783 aaKnown RBP eCLIP11.98□□□□□ -0.49
HMGCR-201ENST00000287936 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
HMGCR-201ENST00000287936 C3P01024 1663 aa11.97□□□□□ -0.49
HMGCR-201ENST00000287936 BRD1O95696 1058 aa11.97□□□□□ -0.49
HMGCR-201ENST00000287936 BOLA2Q9H3K6 86 aa11.97□□□□□ -0.49
HMGCR-201ENST00000287936 ADGRL3Q9HAR2 1447 aa11.97□□□□□ -0.49
HMGCR-201ENST00000287936 PXDNLA1KZ92 1463 aa11.97□□□□□ -0.49
HMGCR-201ENST00000287936 MCM5P33992 734 aa11.97□□□□□ -0.49
HMGCR-201ENST00000287936 FMNL2Q96PY5 1086 aa11.97□□□□□ -0.49
HMGCR-201ENST00000287936 CCDC9Q9Y3X0 531 aaKnown RBP11.97□□□□□ -0.49
HMGCR-201ENST00000287936 NRKQ7Z2Y5 1582 aa11.97□□□□□ -0.49
HMGCR-201ENST00000287936 BICD2Q8TD16 824 aa11.96□□□□□ -0.49
HMGCR-201ENST00000287936 HMG20BQ9P0W2 317 aa11.96□□□□□ -0.49
HMGCR-201ENST00000287936 RGS12O14924 1447 aa11.96□□□□□ -0.49
HMGCR-201ENST00000287936 UBE2HP62256 183 aa11.96□□□□□ -0.5
HMGCR-201ENST00000287936 POLA2Q14181 598 aa11.96□□□□□ -0.5
HMGCR-201ENST00000287936 UVSSAQ2YD98 709 aa11.96□□□□□ -0.5
HMGCR-201ENST00000287936 NRDCO43847 1150 aa11.96□□□□□ -0.5
HMGCR-201ENST00000287936 SNRPA1P09661 255 aaKnown RBP11.96□□□□□ -0.5
HMGCR-201ENST00000287936 PRIM1P49642 420 aaKnown RBP11.96□□□□□ -0.5
HMGCR-201ENST00000287936 CCDC192P0DO97 292 aa11.95□□□□□ -0.5
HMGCR-201ENST00000287936 AK2P54819 239 aa11.95□□□□□ -0.5
HMGCR-201ENST00000287936 CUL4AQ13619 759 aa11.95□□□□□ -0.5
HMGCR-201ENST00000287936 VPS53Q5VIR6 699 aa11.95□□□□□ -0.5
HMGCR-201ENST00000287936 SNX14Q9Y5W7 946 aa11.95□□□□□ -0.5
HMGCR-201ENST00000287936 GJB2P29033 226 aa11.95□□□□□ -0.5
HMGCR-201ENST00000287936 CWF19L2Q2TBE0 894 aaKnown RBP11.95□□□□□ -0.5
HMGCR-201ENST00000287936 GAS2L3Q86XJ1 694 aa11.95□□□□□ -0.5
HMGCR-201ENST00000287936 PALD1Q9ULE6 856 aa11.95□□□□□ -0.5
HMGCR-201ENST00000287936 PA2G4Q9UQ80 394 aaKnown RBP11.95□□□□□ -0.5
HMGCR-201ENST00000287936 AKAP12Q02952 1782 aa11.95□□□□□ -0.5
HMGCR-201ENST00000287936 NCAPD2Q15021 1401 aa11.95□□□□□ -0.5
HMGCR-201ENST00000287936 RBM8AQ9Y5S9 174 aaKnown RBP11.94□□□□□ -0.5
HMGCR-201ENST00000287936 USP48Q86UV5 1035 aa11.94□□□□□ -0.5
HMGCR-201ENST00000287936 GIGYF1O75420 1035 aaPredicted RBP11.94□□□□□ -0.5
HMGCR-201ENST00000287936 SASS6Q6UVJ0 657 aa11.94□□□□□ -0.5
HMGCR-201ENST00000287936 ANKRD13DQ6ZTN6 518 aa11.94□□□□□ -0.5
HMGCR-201ENST00000287936 XAGE3Q8WTP9 111 aa11.94□□□□□ -0.5
HMGCR-201ENST00000287936 R3HCC1Q9Y3T6 440 aaKnown RBP11.94□□□□□ -0.5
HMGCR-201ENST00000287936 NRXN3Q9Y4C0 1643 aa11.94□□□□□ -0.5
HMGCR-201ENST00000287936 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
HMGCR-201ENST00000287936 A0A0G2JS52 829 aa11.94□□□□□ -0.5
HMGCR-201ENST00000287936 F13A1P00488 732 aa11.94□□□□□ -0.5
HMGCR-201ENST00000287936 PPP1R9BQ96SB3 815 aa11.94□□□□□ -0.5
HMGCR-201ENST00000287936 GDPD2Q9HCC8 539 aa11.94□□□□□ -0.5
HMGCR-201ENST00000287936 UBR1Q8IWV7 1749 aa11.93□□□□□ -0.5
HMGCR-201ENST00000287936 EVA1CP58658 441 aa11.93□□□□□ -0.5
HMGCR-201ENST00000287936 CCDC171Q6TFL3 1326 aa11.93□□□□□ -0.5
HMGCR-201ENST00000287936 PKP1Q13835 747 aa11.93□□□□□ -0.5
HMGCR-201ENST00000287936 KCNQ3O43525 872 aa11.93□□□□□ -0.5
HMGCR-201ENST00000287936 SCAND2PQ9GZW5 306 aaPredicted RBP11.93□□□□□ -0.5
HMGCR-201ENST00000287936 GOLGA6L19H0YKK7 550 aa11.93□□□□□ -0.5
HMGCR-201ENST00000287936 GNL2Q13823 731 aaKnown RBP11.93□□□□□ -0.5
HMGCR-201ENST00000287936 COPS6Q7L5N1 327 aa11.93□□□□□ -0.5
HMGCR-201ENST00000287936 TM6SF1Q9BZW5 370 aa11.93□□□□□ -0.5
HMGCR-201ENST00000287936 C19orf44Q9H6X5 657 aa11.93□□□□□ -0.5
HMGCR-201ENST00000287936 NMIQ13287 307 aaPredicted RBP11.92□□□□□ -0.5
HMGCR-201ENST00000287936 SF3A1Q15459 793 aaKnown RBP11.92□□□□□ -0.5
HMGCR-201ENST00000287936 ARHGEF25Q86VW2 580 aa11.92□□□□□ -0.5
HMGCR-201ENST00000287936 RBSNQ9H1K0 784 aa11.92□□□□□ -0.5
HMGCR-201ENST00000287936 BICC1Q9H694 974 aaKnown RBP11.92□□□□□ -0.5
HMGCR-201ENST00000287936 CEP170BQ9Y4F5 1589 aaPredicted RBP11.92□□□□□ -0.5
HMGCR-201ENST00000287936 UNC5CLQ8IV45 518 aa11.92□□□□□ -0.5
HMGCR-201ENST00000287936 ORAI2Q96SN7 254 aa11.92□□□□□ -0.5
HMGCR-201ENST00000287936 SLIT1O75093 1534 aa11.92□□□□□ -0.5
HMGCR-201ENST00000287936 A0A087WZG4 1122 aa11.92□□□□□ -0.5
HMGCR-201ENST00000287936 TPM4P67936 248 aa11.92□□□□□ -0.5
HMGCR-201ENST00000287936 CCDC73Q6ZRK6 1079 aa11.92□□□□□ -0.5
HMGCR-201ENST00000287936 NUP62CLQ9H1M0 184 aa11.92□□□□□ -0.5
HMGCR-201ENST00000287936 HMGB1P09429 215 aaKnown RBP11.91□□□□□ -0.5
HMGCR-201ENST00000287936 STK3Q13188 491 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 ZNF790Q6PG37 636 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 RUFY3Q7L099 469 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 SPATA32Q96LK8 384 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 CYP2E1P05181 493 aaPredicted RBP11.91□□□□□ -0.5
HMGCR-201ENST00000287936 SLC39A6Q13433 755 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 CREB3L3Q68CJ9 461 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
HMGCR-201ENST00000287936 CNPY2Q9Y2B0 182 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 TOM1L2Q6ZVM7 507 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 ARHGAP23Q9P227 1491 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 CCDC158Q5M9N0 1113 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 SUCLG2Q96I99 432 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 DCAF5Q96JK2 942 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 LSG1Q9H089 658 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms