RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 PI4KAP1Q8N8J0 262 aa20.9■□□□□ 0.94
TRAM1-201ENST00000262213 HYPKQ9NX55 129 aa20.9■□□□□ 0.94
TRAM1-201ENST00000262213 FAM173BQ6P4H8 233 aa20.9■□□□□ 0.94
TRAM1-201ENST00000262213 CHPF2Q9P2E5 772 aa20.9■□□□□ 0.94
TRAM1-201ENST00000262213 LTKP29376 864 aa20.89■□□□□ 0.93
TRAM1-201ENST00000262213 MTMR6Q9Y217 621 aa20.89■□□□□ 0.93
TRAM1-201ENST00000262213 MAP3K5Q99683 1374 aa20.89■□□□□ 0.93
TRAM1-201ENST00000262213 KCNJ4P48050 445 aa20.89■□□□□ 0.93
TRAM1-201ENST00000262213 CAMK4Q16566 473 aa20.89■□□□□ 0.93
TRAM1-201ENST00000262213 PYCARDQ9ULZ3 195 aa20.88■□□□□ 0.93
TRAM1-201ENST00000262213 FMN2Q9NZ56 1722 aa20.88■□□□□ 0.93
TRAM1-201ENST00000262213 ZNF710Q8N1W2 664 aa20.88■□□□□ 0.93
TRAM1-201ENST00000262213 TCEANC2Q96MN5 208 aa20.88■□□□□ 0.93
TRAM1-201ENST00000262213 HTATSF1O43719 755 aaKnown RBP20.87■□□□□ 0.93
TRAM1-201ENST00000262213 PA2G4Q9UQ80 394 aaKnown RBP20.87■□□□□ 0.93
TRAM1-201ENST00000262213 NALCNQ8IZF0 1738 aa20.87■□□□□ 0.93
TRAM1-201ENST00000262213 HOXC9P31274 260 aa20.87■□□□□ 0.93
TRAM1-201ENST00000262213 KCNQ3O43525 872 aa20.86■□□□□ 0.93
TRAM1-201ENST00000262213 PRIMPOLQ96LW4 560 aa20.86■□□□□ 0.93
TRAM1-201ENST00000262213 CYP46A1Q9Y6A2 500 aa20.86■□□□□ 0.93
TRAM1-201ENST00000262213 TTC21AQ8NDW8 1320 aa20.86■□□□□ 0.93
TRAM1-201ENST00000262213 TMEM2Q9UHN6 1383 aa20.86■□□□□ 0.93
TRAM1-201ENST00000262213 DNAAF4Q8WXU2 420 aa20.86■□□□□ 0.93
TRAM1-201ENST00000262213 FUCA2Q9BTY2 467 aa20.86■□□□□ 0.93
TRAM1-201ENST00000262213 HMGN5P82970 282 aaKnown RBP20.85■□□□□ 0.93
TRAM1-201ENST00000262213 COL9A3Q14050 684 aaPredicted RBP20.85■□□□□ 0.93
TRAM1-201ENST00000262213 ME3Q16798 604 aa20.85■□□□□ 0.93
TRAM1-201ENST00000262213 KCNF1Q9H3M0 494 aa20.85■□□□□ 0.93
TRAM1-201ENST00000262213 ADAMTS13Q76LX8 1427 aa20.85■□□□□ 0.93
TRAM1-201ENST00000262213 TNRQ92752 1358 aa20.85■□□□□ 0.93
TRAM1-201ENST00000262213 EPB41L2O43491 1005 aaKnown RBP20.85■□□□□ 0.93
TRAM1-201ENST00000262213 CCDC94Q9BW85 323 aaPredicted RBP20.85■□□□□ 0.93
TRAM1-201ENST00000262213 GLRX3O76003 335 aaKnown RBP20.85■□□□□ 0.93
TRAM1-201ENST00000262213 CLASRPQ8N2M8 674 aaKnown RBP20.85■□□□□ 0.93
TRAM1-201ENST00000262213 LGR6Q9HBX8 967 aa20.85■□□□□ 0.93
TRAM1-201ENST00000262213 AMOTL2Q9Y2J4 779 aa20.85■□□□□ 0.93
TRAM1-201ENST00000262213 ST3GAL1Q11201 340 aa20.84■□□□□ 0.93
TRAM1-201ENST00000262213 RUFY2Q8WXA3 655 aa20.84■□□□□ 0.93
TRAM1-201ENST00000262213 KIF3AQ9Y496 699 aa20.84■□□□□ 0.93
TRAM1-201ENST00000262213 CBX1P83916 185 aa20.84■□□□□ 0.93
TRAM1-201ENST00000262213 BEND3Q5T5X7 828 aa20.84■□□□□ 0.93
TRAM1-201ENST00000262213 LARP1BQ659C4 914 aaKnown RBP20.84■□□□□ 0.93
TRAM1-201ENST00000262213 CKAP2LQ8IYA6 745 aa20.84■□□□□ 0.93
TRAM1-201ENST00000262213 PRDM4Q9UKN5 801 aa20.84■□□□□ 0.93
TRAM1-201ENST00000262213 IFIT2P09913 472 aaKnown RBP20.83■□□□□ 0.93
TRAM1-201ENST00000262213 TOPAZ1Q8N9V7 1692 aa20.83■□□□□ 0.92
TRAM1-201ENST00000262213 CCDC192P0DO97 292 aa20.82■□□□□ 0.92
TRAM1-201ENST00000262213 VPS53Q5VIR6 699 aa20.82■□□□□ 0.92
TRAM1-201ENST00000262213 CDC37L1Q7L3B6 337 aa20.82■□□□□ 0.92
TRAM1-201ENST00000262213 LIG1P18858 919 aa20.82■□□□□ 0.92
TRAM1-201ENST00000262213 TTC6Q86TZ1 520 aa20.82■□□□□ 0.92
TRAM1-201ENST00000262213 FAM227BQ96M60 508 aa20.82■□□□□ 0.92
TRAM1-201ENST00000262213 SPTLC3Q9NUV7 552 aa20.82■□□□□ 0.92
TRAM1-201ENST00000262213 TFIP11Q9UBB9 837 aaKnown RBP20.82■□□□□ 0.92
TRAM1-201ENST00000262213 TPCN1Q9ULQ1 816 aa20.82■□□□□ 0.92
TRAM1-201ENST00000262213 AACSQ86V21 672 aa20.81■□□□□ 0.92
TRAM1-201ENST00000262213 LUZP1Q86V48 1076 aa20.81■□□□□ 0.92
TRAM1-201ENST00000262213 ABTB2Q8N961 1025 aa20.81■□□□□ 0.92
TRAM1-201ENST00000262213 C9orf78Q9NZ63 289 aaPredicted RBP20.81■□□□□ 0.92
TRAM1-201ENST00000262213 RBM8AQ9Y5S9 174 aaKnown RBP20.81■□□□□ 0.92
TRAM1-201ENST00000262213 SETD1BQ9UPS6 1966 aaKnown RBP20.81■□□□□ 0.92
TRAM1-201ENST00000262213 STK3Q13188 491 aa20.81■□□□□ 0.92
TRAM1-201ENST00000262213 HSP90AB4PQ58FF6 505 aa20.81■□□□□ 0.92
TRAM1-201ENST00000262213 PPP4R3BQ5MIZ7 849 aa20.81■□□□□ 0.92
TRAM1-201ENST00000262213 KIAA1524Q8TCG1 905 aa20.81■□□□□ 0.92
TRAM1-201ENST00000262213 BCL2L12Q9HB09 334 aa20.81■□□□□ 0.92
TRAM1-201ENST00000262213 ECHDC1Q9NTX5 307 aa20.81■□□□□ 0.92
TRAM1-201ENST00000262213 ZKSCAN1P17029 563 aaPredicted RBP20.8■□□□□ 0.92
TRAM1-201ENST00000262213 PTGS1P23219 599 aa20.8■□□□□ 0.92
TRAM1-201ENST00000262213 ZSWIM6Q9HCJ5 1215 aa20.8■□□□□ 0.92
TRAM1-201ENST00000262213 ZHX1Q9UKY1 873 aaPredicted RBP20.8■□□□□ 0.92
TRAM1-201ENST00000262213 PXDNLA1KZ92 1463 aa20.8■□□□□ 0.92
TRAM1-201ENST00000262213 PTPRUQ92729 1446 aa20.8■□□□□ 0.92
TRAM1-201ENST00000262213 ZSCAN31Q96LW9 406 aaPredicted RBP20.8■□□□□ 0.92
TRAM1-201ENST00000262213 EIF4A1P60842 406 aaKnown RBP20.8■□□□□ 0.92
TRAM1-201ENST00000262213 DRC7Q8IY82 874 aa20.8■□□□□ 0.92
TRAM1-201ENST00000262213 SMAP1Q8IYB5 467 aaPredicted RBP20.8■□□□□ 0.92
TRAM1-201ENST00000262213 SH2B1Q9NRF2 756 aaPredicted RBP20.8■□□□□ 0.92
TRAM1-201ENST00000262213 CACNA1FO60840 1977 aa20.79■□□□□ 0.92
TRAM1-201ENST00000262213 RIOK3O14730 519 aaKnown RBP20.79■□□□□ 0.92
TRAM1-201ENST00000262213 CCDC8Q9H0W5 538 aaPredicted RBP20.79■□□□□ 0.92
TRAM1-201ENST00000262213 NUP62CLQ9H1M0 184 aa20.79■□□□□ 0.92
TRAM1-201ENST00000262213 TTC41PQ6P2S7 1318 aa20.79■□□□□ 0.92
TRAM1-201ENST00000262213 KRT85P78386 507 aa20.79■□□□□ 0.92
TRAM1-201ENST00000262213 CHAF1AQ13111 956 aaPredicted RBP20.79■□□□□ 0.92
TRAM1-201ENST00000262213 CREB3L3Q68CJ9 461 aa20.79■□□□□ 0.92
TRAM1-201ENST00000262213 BCL11BQ9C0K0 894 aaPredicted RBP20.79■□□□□ 0.92
TRAM1-201ENST00000262213 RGPD8O14715 1765 aaPredicted RBP20.79■□□□□ 0.92
TRAM1-201ENST00000262213 CCDC171Q6TFL3 1326 aa20.78■□□□□ 0.92
TRAM1-201ENST00000262213 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.78■□□□□ 0.92
TRAM1-201ENST00000262213 GOLGA6L4A6NEF3 574 aa20.78■□□□□ 0.92
TRAM1-201ENST00000262213 CEBPAP49715 358 aaPredicted RBP20.78■□□□□ 0.92
TRAM1-201ENST00000262213 NMIQ13287 307 aaPredicted RBP20.78■□□□□ 0.92
TRAM1-201ENST00000262213 MAP3K11Q16584 847 aa20.78■□□□□ 0.92
TRAM1-201ENST00000262213 CWF19L2Q2TBE0 894 aaKnown RBP20.78■□□□□ 0.92
TRAM1-201ENST00000262213 SPDYE4A6NLX3 237 aa20.78■□□□□ 0.92
TRAM1-201ENST00000262213 GPATCH3Q96I76 525 aa20.78■□□□□ 0.92
TRAM1-201ENST00000262213 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.78■□□□□ 0.92
TRAM1-201ENST00000262213 FER1L4A9Z1Z3 1794 aa20.78■□□□□ 0.92
TRAM1-201ENST00000262213 TYRO3Q06418 890 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms