RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 ERICH4A6NGS2 130 aa18.41■□□□□ 0.54
SHTN1-201ENST00000260777 SSBP05455 408 aaKnown RBP eCLIP18.41■□□□□ 0.54
SHTN1-201ENST00000260777 RAB3GAP1Q15042 981 aa18.41■□□□□ 0.54
SHTN1-201ENST00000260777 SPA17Q15506 151 aa18.41■□□□□ 0.54
SHTN1-201ENST00000260777 PI4KAP1Q8N8J0 262 aa18.41■□□□□ 0.54
SHTN1-201ENST00000260777 ZNF287Q9HBT7 754 aa18.41■□□□□ 0.54
SHTN1-201ENST00000260777 ZNF608Q9ULD9 1512 aaPredicted RBP18.41■□□□□ 0.54
SHTN1-201ENST00000260777 HSP90AB3PQ58FF7 597 aa18.4■□□□□ 0.54
SHTN1-201ENST00000260777 CRACR2AQ9BSW2 395 aa18.4■□□□□ 0.54
SHTN1-201ENST00000260777 GOLGA8AA7E2F4 631 aa18.4■□□□□ 0.54
SHTN1-201ENST00000260777 PLCH2O75038 1416 aa18.4■□□□□ 0.54
SHTN1-201ENST00000260777 ATP10BO94823 1461 aa18.4■□□□□ 0.54
SHTN1-201ENST00000260777 TMOD3Q9NYL9 352 aa18.4■□□□□ 0.54
SHTN1-201ENST00000260777 PAXBP1Q9Y5B6 917 aa18.4■□□□□ 0.54
SHTN1-201ENST00000260777 GOLGA6L9A6NEM1 432 aa18.39■□□□□ 0.54
SHTN1-201ENST00000260777 HCLS1P14317 486 aaPredicted RBP18.39■□□□□ 0.54
SHTN1-201ENST00000260777 KIF4BQ2VIQ3 1234 aa18.39■□□□□ 0.54
SHTN1-201ENST00000260777 USP8P40818 1118 aa18.39■□□□□ 0.53
SHTN1-201ENST00000260777 FKBP15Q5T1M5 1219 aa18.39■□□□□ 0.53
SHTN1-201ENST00000260777 KLHL10Q6JEL2 608 aa18.39■□□□□ 0.53
SHTN1-201ENST00000260777 CTCFLQ8NI51 663 aaPredicted RBP18.39■□□□□ 0.53
SHTN1-201ENST00000260777 TRMT1Q9NXH9 659 aaKnown RBP18.39■□□□□ 0.53
SHTN1-201ENST00000260777 ATP8B2P98198 1209 aa18.39■□□□□ 0.53
SHTN1-201ENST00000260777 CCDC150Q8NCX0 1101 aa18.39■□□□□ 0.53
SHTN1-201ENST00000260777 PTCD1O75127 700 aaKnown RBP18.38■□□□□ 0.53
SHTN1-201ENST00000260777 TMC6Q7Z403 805 aa18.38■□□□□ 0.53
SHTN1-201ENST00000260777 ACEP12821 1306 aa18.38■□□□□ 0.53
SHTN1-201ENST00000260777 GOLGA6L7A0A1B0GV03 622 aa18.38■□□□□ 0.53
SHTN1-201ENST00000260777 MINDY4BA8MYZ0 360 aa18.38■□□□□ 0.53
SHTN1-201ENST00000260777 SLC5A1P13866 664 aa18.38■□□□□ 0.53
SHTN1-201ENST00000260777 CAVIN4Q5BKX8 364 aa18.38■□□□□ 0.53
SHTN1-201ENST00000260777 PIBF1Q8WXW3 757 aa18.38■□□□□ 0.53
SHTN1-201ENST00000260777 SYCP2Q9BX26 1530 aa18.38■□□□□ 0.53
SHTN1-201ENST00000260777 SHANK2Q9UPX8 1470 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 RLBP1P12271 317 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 TTF1Q15361 905 aaPredicted RBP18.37■□□□□ 0.53
SHTN1-201ENST00000260777 CENPHQ9H3R5 247 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 USP16Q9Y5T5 823 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 POTEB2H3BUK9 544 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 GOLIM4O00461 696 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 IFIT3O14879 490 aaKnown RBP18.37■□□□□ 0.53
SHTN1-201ENST00000260777 JAKMIP3Q5VZ66 844 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 GIMAP6Q6P9H5 292 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 USP48Q86UV5 1035 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 IQCA1Q86XH1 822 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 C8orf58Q8NAV2 365 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 DCTPP1Q9H773 170 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 ZBTB40Q9NUA8 1239 aa18.37■□□□□ 0.53
SHTN1-201ENST00000260777 ANKRD18BA2A2Z9 1011 aa18.36■□□□□ 0.53
SHTN1-201ENST00000260777 SNW1Q13573 536 aaKnown RBP18.36■□□□□ 0.53
SHTN1-201ENST00000260777 ZNF652Q9Y2D9 606 aa18.36■□□□□ 0.53
SHTN1-201ENST00000260777 CCDC171Q6TFL3 1326 aa18.36■□□□□ 0.53
SHTN1-201ENST00000260777 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
SHTN1-201ENST00000260777 HS1BP3Q53T59 392 aa18.36■□□□□ 0.53
SHTN1-201ENST00000260777 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.36■□□□□ 0.533e-6■■■■■ 67.1
SHTN1-201ENST00000260777 SEC63Q9UGP8 760 aaKnown RBP18.36■□□□□ 0.53
SHTN1-201ENST00000260777 ORC3Q9UBD5 711 aaPredicted RBP18.36■□□□□ 0.53
SHTN1-201ENST00000260777 CNPY2Q9Y2B0 182 aa18.36■□□□□ 0.53
SHTN1-201ENST00000260777 COL17A1Q9UMD9 1497 aaPredicted RBP18.36■□□□□ 0.53
SHTN1-201ENST00000260777 PER1O15534 1290 aaPredicted RBP18.35■□□□□ 0.53
SHTN1-201ENST00000260777 YEATS4O95619 227 aa18.35■□□□□ 0.53
SHTN1-201ENST00000260777 IARSP41252 1262 aaKnown RBP18.35■□□□□ 0.53
SHTN1-201ENST00000260777 CEP135Q66GS9 1140 aa18.35■□□□□ 0.53
SHTN1-201ENST00000260777 PANK2Q9BZ23 570 aa18.35■□□□□ 0.53
SHTN1-201ENST00000260777 FAM200AQ8TCP9 573 aa18.35■□□□□ 0.53
SHTN1-201ENST00000260777 FGFR1OPO95684 399 aaKnown RBP18.35■□□□□ 0.53
SHTN1-201ENST00000260777 PPP4R3BQ5MIZ7 849 aa18.35■□□□□ 0.53
SHTN1-201ENST00000260777 KANK3Q6NY19 840 aa18.35■□□□□ 0.53
SHTN1-201ENST00000260777 NCOA7Q8NI08 942 aa18.35■□□□□ 0.53
SHTN1-201ENST00000260777 TSG101Q99816 390 aa18.35■□□□□ 0.53
SHTN1-201ENST00000260777 PRDM10Q9NQV6 1147 aa18.35■□□□□ 0.53
SHTN1-201ENST00000260777 TNNQ9UQP3 1299 aa18.35■□□□□ 0.53
SHTN1-201ENST00000260777 TMEM132AQ24JP5 1023 aa18.34■□□□□ 0.53
SHTN1-201ENST00000260777 ZKSCAN5Q9Y2L8 839 aa18.34■□□□□ 0.53
SHTN1-201ENST00000260777 F13A1P00488 732 aa18.34■□□□□ 0.53
SHTN1-201ENST00000260777 CWC25Q9NXE8 425 aaPredicted RBP18.34■□□□□ 0.53
SHTN1-201ENST00000260777 UHRF1BP1Q6BDS2 1440 aa18.34■□□□□ 0.53
SHTN1-201ENST00000260777 ALDH1L1O75891 902 aa18.34■□□□□ 0.53
SHTN1-201ENST00000260777 NUP88Q99567 741 aaPredicted RBP18.34■□□□□ 0.53
SHTN1-201ENST00000260777 PYM1Q9BRP8 204 aaKnown RBP18.34■□□□□ 0.53
SHTN1-201ENST00000260777 BIN1O00499 593 aa18.34■□□□□ 0.53
SHTN1-201ENST00000260777 VAMP4O75379 141 aa18.34■□□□□ 0.53
SHTN1-201ENST00000260777 NOLC1Q14978 699 aaKnown RBP eCLIP18.34■□□□□ 0.53
SHTN1-201ENST00000260777 ZFYVE9O95405 1425 aa18.33■□□□□ 0.53
SHTN1-201ENST00000260777 SEPT11Q9NVA2 429 aaKnown RBP18.33■□□□□ 0.53
SHTN1-201ENST00000260777 USP5P45974 858 aa18.33■□□□□ 0.52
SHTN1-201ENST00000260777 CCDC102BQ68D86 513 aa18.33■□□□□ 0.52
SHTN1-201ENST00000260777 IFNL2Q8IZJ0 200 aa18.33■□□□□ 0.52
SHTN1-201ENST00000260777 TRMT112Q9UI30 125 aaKnown RBP18.33■□□□□ 0.52
SHTN1-201ENST00000260777 RBM8AQ9Y5S9 174 aaKnown RBP18.33■□□□□ 0.52
SHTN1-201ENST00000260777 WDR62O43379 1518 aa18.32■□□□□ 0.52
SHTN1-201ENST00000260777 ZMYM4Q5VZL5 1548 aa18.32■□□□□ 0.52
SHTN1-201ENST00000260777 PPP1R12BO60237 982 aaPredicted RBP18.32■□□□□ 0.52
SHTN1-201ENST00000260777 NEFHP12036 1026 aa18.32■□□□□ 0.52
SHTN1-201ENST00000260777 CATIPQ7Z7H3 387 aa18.32■□□□□ 0.52
SHTN1-201ENST00000260777 MKNK2Q9HBH9 465 aa18.32■□□□□ 0.52
SHTN1-201ENST00000260777 CALCOCO1Q9P1Z2 691 aa18.32■□□□□ 0.52
SHTN1-201ENST00000260777 INSRP06213 1382 aa18.32■□□□□ 0.52
SHTN1-201ENST00000260777 PPIP5K1Q6PFW1 1433 aa18.32■□□□□ 0.52
SHTN1-201ENST00000260777 SHTN1A0MZ66 631 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms