RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 SETDB2Q96T68 719 aa17.36■□□□□ 0.37
MRPL35-201ENST00000254644 PIP4K2AP48426 406 aaPredicted RBP17.35■□□□□ 0.37
MRPL35-201ENST00000254644 NPM2Q86SE8 214 aaKnown RBP17.34■□□□□ 0.37
MRPL35-201ENST00000254644 CCDC24Q8N4L8 307 aa17.34■□□□□ 0.37
MRPL35-201ENST00000254644 RRAGCQ9HB90 399 aa17.34■□□□□ 0.37
MRPL35-201ENST00000254644 GLTPD2A6NH11 291 aa17.33■□□□□ 0.36
MRPL35-201ENST00000254644 SRGNP10124 158 aa17.33■□□□□ 0.36
MRPL35-201ENST00000254644 FSTL1Q12841 308 aa17.33■□□□□ 0.36
MRPL35-201ENST00000254644 CNBD1Q8NA66 436 aa17.33■□□□□ 0.36
MRPL35-201ENST00000254644 KLRG2A4D1S0 409 aaPredicted RBP17.32■□□□□ 0.36
MRPL35-201ENST00000254644 STYK1Q6J9G0 422 aa17.32■□□□□ 0.36
MRPL35-201ENST00000254644 ZNF622Q969S3 477 aaKnown RBP eCLIP17.32■□□□□ 0.36
MRPL35-201ENST00000254644 LTBP3Q9NS15 1303 aa17.31■□□□□ 0.36
MRPL35-201ENST00000254644 CNKSR1Q969H4 720 aa17.31■□□□□ 0.36
MRPL35-201ENST00000254644 MIS18AQ9NYP9 233 aa17.31■□□□□ 0.36
MRPL35-201ENST00000254644 C21orf2O43822 256 aa17.3■□□□□ 0.36
MRPL35-201ENST00000254644 ST5P78524 1137 aa17.3■□□□□ 0.36
MRPL35-201ENST00000254644 C16orf71Q8IYS4 520 aaPredicted RBP17.3■□□□□ 0.36
MRPL35-201ENST00000254644 ZNF652Q9Y2D9 606 aa17.3■□□□□ 0.36
MRPL35-201ENST00000254644 POTECB2RU33 542 aa17.29■□□□□ 0.36
MRPL35-201ENST00000254644 NFE2L2Q16236 605 aa17.29■□□□□ 0.36
MRPL35-201ENST00000254644 PNISRQ8TF01 805 aaKnown RBP17.29■□□□□ 0.36
MRPL35-201ENST00000254644 C7orf43Q8WVR3 580 aa17.29■□□□□ 0.36
MRPL35-201ENST00000254644 MASTLQ96GX5 879 aa17.29■□□□□ 0.36
MRPL35-201ENST00000254644 EIF4A1P60842 406 aaKnown RBP17.28■□□□□ 0.36
MRPL35-201ENST00000254644 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
MRPL35-201ENST00000254644 NEFMP07197 916 aa17.27■□□□□ 0.36
MRPL35-201ENST00000254644 VEGFAP15692 232 aaPredicted RBP17.27■□□□□ 0.36
MRPL35-201ENST00000254644 HLFQ16534 295 aa17.27■□□□□ 0.36
MRPL35-201ENST00000254644 PRPF40BQ6NWY9 871 aaKnown RBP17.27■□□□□ 0.36
MRPL35-201ENST00000254644 TPTE2Q6XPS3 522 aa17.27■□□□□ 0.36
MRPL35-201ENST00000254644 SMC1BQ8NDV3 1235 aa17.26■□□□□ 0.35
MRPL35-201ENST00000254644 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
MRPL35-201ENST00000254644 NIP7Q9Y221 180 aaKnown RBP eCLIP17.26■□□□□ 0.35
MRPL35-201ENST00000254644 ERVV-1B6SEH8 477 aa17.25■□□□□ 0.35
MRPL35-201ENST00000254644 SOGA3Q5TF21 947 aa17.25■□□□□ 0.35
MRPL35-201ENST00000254644 IFFO2Q5TF58 517 aa17.25■□□□□ 0.35
MRPL35-201ENST00000254644 THUMPD2Q9BTF0 503 aaKnown RBP17.25■□□□□ 0.35
MRPL35-201ENST00000254644 TAOK3Q9H2K8 898 aa17.25■□□□□ 0.35
MRPL35-201ENST00000254644 ZNF219Q9P2Y4 722 aaPredicted RBP17.25■□□□□ 0.35
MRPL35-201ENST00000254644 SCN4AP35499 1836 aa17.24■□□□□ 0.35
MRPL35-201ENST00000254644 NPHP1O15259 732 aa17.24■□□□□ 0.35
MRPL35-201ENST00000254644 NPR1P16066 1061 aa17.24■□□□□ 0.35
MRPL35-201ENST00000254644 ERFEQ4G0M1 354 aa17.24■□□□□ 0.35
MRPL35-201ENST00000254644 RALBP1Q15311 655 aa17.23■□□□□ 0.35
MRPL35-201ENST00000254644 DPY19L2Q6NUT2 758 aa17.23■□□□□ 0.35
MRPL35-201ENST00000254644 PCNTO95613 3336 aa17.23■□□□□ 0.35
MRPL35-201ENST00000254644 MAP3K15Q6ZN16 1313 aa17.22■□□□□ 0.35
MRPL35-201ENST00000254644 HTRA3P83110 453 aa17.22■□□□□ 0.35
MRPL35-201ENST00000254644 JMYQ8N9B5 988 aa17.22■□□□□ 0.35
MRPL35-201ENST00000254644 KLRG1Q96E93 195 aa17.22■□□□□ 0.35
MRPL35-201ENST00000254644 SNED1Q8TER0 1413 aa17.21■□□□□ 0.35
MRPL35-201ENST00000254644 CRY2Q49AN0 593 aa17.21■□□□□ 0.35
MRPL35-201ENST00000254644 TTLL7Q6ZT98 887 aa17.21■□□□□ 0.35
MRPL35-201ENST00000254644 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
MRPL35-201ENST00000254644 RIC1Q4ADV7 1423 aa17.21■□□□□ 0.34
MRPL35-201ENST00000254644 ERBB4Q15303 1308 aa17.21■□□□□ 0.34
MRPL35-201ENST00000254644 MAPK8IP3Q9UPT6 1336 aa17.21■□□□□ 0.34
MRPL35-201ENST00000254644 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
MRPL35-201ENST00000254644 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
MRPL35-201ENST00000254644 BABAM1Q9NWV8 329 aa17.2■□□□□ 0.34
MRPL35-201ENST00000254644 RRP7AQ9Y3A4 280 aaKnown RBP17.2■□□□□ 0.34
MRPL35-201ENST00000254644 ALDH1B1P30837 517 aa17.19■□□□□ 0.34
MRPL35-201ENST00000254644 ZNF34Q8IZ26 560 aa17.19■□□□□ 0.34
MRPL35-201ENST00000254644 ANKRD36CQ5JPF3 1778 aa17.19■□□□□ 0.34
MRPL35-201ENST00000254644 UBN2Q6ZU65 1347 aa17.19■□□□□ 0.34
MRPL35-201ENST00000254644 ABCC12Q96J65 1359 aa17.18■□□□□ 0.34
MRPL35-201ENST00000254644 FAM177BA6PVY3 158 aa17.18■□□□□ 0.34
MRPL35-201ENST00000254644 DDNO94850 711 aaPredicted RBP17.18■□□□□ 0.34
MRPL35-201ENST00000254644 TMPOP42166 694 aaKnown RBP17.18■□□□□ 0.34
MRPL35-201ENST00000254644 RIPK4P57078 832 aa17.18■□□□□ 0.34
MRPL35-201ENST00000254644 FKBP4Q02790 459 aaKnown RBP eCLIP17.18■□□□□ 0.34
MRPL35-201ENST00000254644 PDIA6Q15084 440 aa17.18■□□□□ 0.34
MRPL35-201ENST00000254644 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
MRPL35-201ENST00000254644 NYXQ9GZU5 481 aa17.18■□□□□ 0.34
MRPL35-201ENST00000254644 MYL6BP14649 208 aa17.17■□□□□ 0.34
MRPL35-201ENST00000254644 HOXA10P31260 410 aaPredicted RBP17.17■□□□□ 0.34
MRPL35-201ENST00000254644 OLFM4Q6UX06 510 aa17.17■□□□□ 0.34
MRPL35-201ENST00000254644 GIGYF2Q6Y7W6 1299 aaKnown RBP17.17■□□□□ 0.34
MRPL35-201ENST00000254644 L3MBTL3Q96JM7 780 aaPredicted RBP17.17■□□□□ 0.34
MRPL35-201ENST00000254644 LAMB2P55268 1798 aa17.16■□□□□ 0.34
MRPL35-201ENST00000254644 KIF6Q6ZMV9 814 aa17.16■□□□□ 0.34
MRPL35-201ENST00000254644 NUTM1Q86Y26 1132 aa17.16■□□□□ 0.34
MRPL35-201ENST00000254644 RTKN2Q8IZC4 609 aa17.16■□□□□ 0.34
MRPL35-201ENST00000254644 TSPYL4Q9UJ04 414 aa17.16■□□□□ 0.34
MRPL35-201ENST00000254644 ADAMTSL1Q8N6G6 1762 aa17.15■□□□□ 0.34
MRPL35-201ENST00000254644 GTF2E1P29083 439 aaPredicted RBP17.15■□□□□ 0.34
MRPL35-201ENST00000254644 SUSD4Q5VX71 490 aa17.15■□□□□ 0.34
MRPL35-201ENST00000254644 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
MRPL35-201ENST00000254644 MYBBP1AQ9BQG0 1328 aaKnown RBP17.15■□□□□ 0.34
MRPL35-201ENST00000254644 NTSR2O95665 410 aa17.14■□□□□ 0.33
MRPL35-201ENST00000254644 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
MRPL35-201ENST00000254644 PSMD1Q99460 953 aa17.14■□□□□ 0.33
MRPL35-201ENST00000254644 FZD9O00144 591 aa17.13■□□□□ 0.33
MRPL35-201ENST00000254644 POTEIP0CG38 1075 aa17.13■□□□□ 0.33
MRPL35-201ENST00000254644 POTEJP0CG39 1038 aa17.13■□□□□ 0.33
MRPL35-201ENST00000254644 GPTP24298 496 aa17.13■□□□□ 0.33
MRPL35-201ENST00000254644 LMOD3Q0VAK6 560 aa17.13■□□□□ 0.33
MRPL35-201ENST00000254644 CC2D2BQ6DHV5 1058 aa17.13■□□□□ 0.33
MRPL35-201ENST00000254644 CHADLQ6NUI6 762 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms