RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.69■■□□□ 1.7
SNRPA-201ENST00000243563 PI4KAP2A4QPH2 592 aa25.69■■□□□ 1.7
SNRPA-201ENST00000243563 ZKSCAN2Q63HK3 967 aa25.69■■□□□ 1.7
SNRPA-201ENST00000243563 ATF7IPQ6VMQ6 1270 aa25.69■■□□□ 1.7
SNRPA-201ENST00000243563 DZIP3Q86Y13 1208 aaKnown RBP25.69■■□□□ 1.7
SNRPA-201ENST00000243563 PI4KAP1Q8N8J0 262 aa25.69■■□□□ 1.7
SNRPA-201ENST00000243563 SRP68Q9UHB9 627 aaKnown RBP25.69■■□□□ 1.7
SNRPA-201ENST00000243563 SLC15A2Q16348 729 aa25.68■■□□□ 1.7
SNRPA-201ENST00000243563 ARXQ96QS3 562 aa25.68■■□□□ 1.7
SNRPA-201ENST00000243563 PNPLA7Q6ZV29 1317 aa25.68■■□□□ 1.7
SNRPA-201ENST00000243563 HLFQ16534 295 aa25.67■■□□□ 1.7
SNRPA-201ENST00000243563 PANK1Q8TE04 598 aa25.67■■□□□ 1.7
SNRPA-201ENST00000243563 ARHGAP45Q92619 1136 aa25.67■■□□□ 1.7
SNRPA-201ENST00000243563 TFCP2L1Q9NZI6 479 aa25.67■■□□□ 1.7
SNRPA-201ENST00000243563 MAP3K2Q9Y2U5 619 aa25.67■■□□□ 1.7
SNRPA-201ENST00000243563 CAMTA2O94983 1202 aa25.66■■□□□ 1.7
SNRPA-201ENST00000243563 KSR2Q6VAB6 950 aa25.66■■□□□ 1.7
SNRPA-201ENST00000243563 ANKRD13DQ6ZTN6 518 aa25.66■■□□□ 1.7
SNRPA-201ENST00000243563 MAP3K15Q6ZN16 1313 aa25.66■■□□□ 1.7
SNRPA-201ENST00000243563 PLBD2Q8NHP8 589 aa25.66■■□□□ 1.7
SNRPA-201ENST00000243563 ABCC4O15439 1325 aa25.66■■□□□ 1.7
SNRPA-201ENST00000243563 SSFA2P28290 1259 aa25.65■■□□□ 1.7
SNRPA-201ENST00000243563 COL23A1Q86Y22 540 aaPredicted RBP25.65■■□□□ 1.7
SNRPA-201ENST00000243563 BCL2L12Q9HB09 334 aa25.65■■□□□ 1.7
SNRPA-201ENST00000243563 STK32BQ9NY57 414 aa25.65■■□□□ 1.7
SNRPA-201ENST00000243563 IRX6P78412 446 aaPredicted RBP25.64■■□□□ 1.7
SNRPA-201ENST00000243563 TRAPPC3LQ5T215 181 aa25.64■■□□□ 1.7
SNRPA-201ENST00000243563 KIF6Q6ZMV9 814 aa25.64■■□□□ 1.7
SNRPA-201ENST00000243563 PDGFDQ9GZP0 370 aaPredicted RBP25.64■■□□□ 1.7
SNRPA-201ENST00000243563 IPO8O15397 1037 aaKnown RBP25.63■■□□□ 1.69
SNRPA-201ENST00000243563 RIC3Q7Z5B4 369 aa25.63■■□□□ 1.69
SNRPA-201ENST00000243563 DNAAF4Q8WXU2 420 aa25.63■■□□□ 1.69
SNRPA-201ENST00000243563 API5Q9BZZ5 524 aaKnown RBP25.63■■□□□ 1.69
SNRPA-201ENST00000243563 USPL1Q5W0Q7 1092 aa25.63■■□□□ 1.69
SNRPA-201ENST00000243563 USP42Q9H9J4 1324 aaKnown RBP25.62■■□□□ 1.69
SNRPA-201ENST00000243563 PXDNLA1KZ92 1463 aa25.62■■□□□ 1.69
SNRPA-201ENST00000243563 DDX58O95786 925 aaKnown RBP25.62■■□□□ 1.69
SNRPA-201ENST00000243563 SLC4A10Q6U841 1118 aa25.62■■□□□ 1.69
SNRPA-201ENST00000243563 NARFQ9UHQ1 456 aa25.62■■□□□ 1.69
SNRPA-201ENST00000243563 A0A087WZG4 1122 aa25.61■■□□□ 1.69
SNRPA-201ENST00000243563 ADRA2BP18089 450 aa25.61■■□□□ 1.69
SNRPA-201ENST00000243563 CASZ1Q86V15 1759 aa25.61■■□□□ 1.69
SNRPA-201ENST00000243563 DZIP1LQ8IYY4 767 aaKnown RBP25.61■■□□□ 1.69
SNRPA-201ENST00000243563 TMEM57Q8N5G2 664 aa25.61■■□□□ 1.69
SNRPA-201ENST00000243563 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.6■■□□□ 1.69
SNRPA-201ENST00000243563 MYD88Q99836 296 aa25.6■■□□□ 1.69
SNRPA-201ENST00000243563 METTL22Q9BUU2 404 aaPredicted RBP25.6■■□□□ 1.69
SNRPA-201ENST00000243563 IGKV5-2P06315 115 aa25.59■■□□□ 1.69
SNRPA-201ENST00000243563 RFC4P35249 363 aa25.59■■□□□ 1.69
SNRPA-201ENST00000243563 GIGYF2Q6Y7W6 1299 aaKnown RBP25.59■■□□□ 1.69
SNRPA-201ENST00000243563 NPM2Q86SE8 214 aaKnown RBP25.59■■□□□ 1.69
SNRPA-201ENST00000243563 ERVV-1B6SEH8 477 aa25.59■■□□□ 1.69
SNRPA-201ENST00000243563 ATP5J2-PTCD1G3V325 749 aa25.59■■□□□ 1.69
SNRPA-201ENST00000243563 CWF19L2Q2TBE0 894 aaKnown RBP25.59■■□□□ 1.69
SNRPA-201ENST00000243563 BEND3Q5T5X7 828 aa25.59■■□□□ 1.69
SNRPA-201ENST00000243563 ATP10DQ9P241 1426 aa25.58■■□□□ 1.69
SNRPA-201ENST00000243563 COL24A1Q17RW2 1714 aa25.58■■□□□ 1.69
SNRPA-201ENST00000243563 HMGB2P26583 209 aaKnown RBP25.58■■□□□ 1.69
SNRPA-201ENST00000243563 FTSJ3Q8IY81 847 aaKnown RBP25.57■■□□□ 1.68
SNRPA-201ENST00000243563 COG6Q9Y2V7 657 aa25.57■■□□□ 1.68
SNRPA-201ENST00000243563 GYS1P13807 737 aa25.56■■□□□ 1.68
SNRPA-201ENST00000243563 FKBP8Q14318 412 aa25.56■■□□□ 1.68
SNRPA-201ENST00000243563 MSH5O43196 834 aa25.55■■□□□ 1.68
SNRPA-201ENST00000243563 ZPR1O75312 459 aa25.55■■□□□ 1.68
SNRPA-201ENST00000243563 GPTP24298 496 aa25.55■■□□□ 1.68
SNRPA-201ENST00000243563 TCIRG1Q13488 830 aa25.55■■□□□ 1.68
SNRPA-201ENST00000243563 PDE3AQ14432 1141 aa25.55■■□□□ 1.68
SNRPA-201ENST00000243563 INTS3Q68E01 1043 aaKnown RBP25.55■■□□□ 1.68
SNRPA-201ENST00000243563 UBN2Q6ZU65 1347 aa25.55■■□□□ 1.68
SNRPA-201ENST00000243563 TBC1D9BQ66K14 1250 aa25.55■■□□□ 1.68
SNRPA-201ENST00000243563 CRBNQ96SW2 442 aa25.55■■□□□ 1.68
SNRPA-201ENST00000243563 ISCA1Q9BUE6 129 aa25.55■■□□□ 1.68
SNRPA-201ENST00000243563 R3HDM1Q15032 1099 aaKnown RBP25.54■■□□□ 1.68
SNRPA-201ENST00000243563 ZNF34Q8IZ26 560 aa25.53■■□□□ 1.68
SNRPA-201ENST00000243563 NEURL1BA8MQ27 555 aa25.52■■□□□ 1.68
SNRPA-201ENST00000243563 FLAD1Q8NFF5 587 aa25.52■■□□□ 1.68
SNRPA-201ENST00000243563 PSDA5PKW4 1024 aaPredicted RBP25.52■■□□□ 1.68
SNRPA-201ENST00000243563 ITPRIPQ8IWB1 547 aa25.52■■□□□ 1.68
SNRPA-201ENST00000243563 LINS1Q8NG48 757 aa25.52■■□□□ 1.68
SNRPA-201ENST00000243563 SRCIN1Q9C0H9 1055 aa25.52■■□□□ 1.68
SNRPA-201ENST00000243563 MVPQ14764 893 aaKnown RBP25.51■■□□□ 1.67
SNRPA-201ENST00000243563 MSL1Q68DK7 614 aa25.51■■□□□ 1.67
SNRPA-201ENST00000243563 CLEC4GQ6UXB4 293 aa25.51■■□□□ 1.67
SNRPA-201ENST00000243563 BICDL1Q6ZP65 573 aa25.51■■□□□ 1.67
SNRPA-201ENST00000243563 CCT4P50991 539 aaKnown RBP25.5■■□□□ 1.67
SNRPA-201ENST00000243563 NLRP10Q86W26 655 aa25.5■■□□□ 1.67
SNRPA-201ENST00000243563 JARID2Q92833 1246 aaPredicted RBP25.5■■□□□ 1.67
SNRPA-201ENST00000243563 NEXNQ0ZGT2 675 aa25.49■■□□□ 1.67
SNRPA-201ENST00000243563 NIP7Q9Y221 180 aaKnown RBP eCLIP25.49■■□□□ 1.67
SNRPA-201ENST00000243563 ZNF652Q9Y2D9 606 aa25.49■■□□□ 1.67
SNRPA-201ENST00000243563 MS4A1P11836 297 aa25.48■■□□□ 1.67
SNRPA-201ENST00000243563 NFIXQ14938 502 aa25.48■■□□□ 1.67
SNRPA-201ENST00000243563 EXOC6Q8TAG9 804 aa25.48■■□□□ 1.67
SNRPA-201ENST00000243563 RGL2O15211 777 aa25.48■■□□□ 1.67
SNRPA-201ENST00000243563 GCKRQ14397 625 aa25.48■■□□□ 1.67
SNRPA-201ENST00000243563 HSP90AB3PQ58FF7 597 aa25.48■■□□□ 1.67
SNRPA-201ENST00000243563 SUSD4Q5VX71 490 aa25.48■■□□□ 1.67
SNRPA-201ENST00000243563 MEIS3Q99687 375 aa25.48■■□□□ 1.67
SNRPA-201ENST00000243563 DDX60Q8IY21 1712 aaKnown RBP25.47■■□□□ 1.67
SNRPA-201ENST00000243563 SOCS7O14512 581 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms