RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 SRGAP3O43295 1099 aa16.65■□□□□ 0.26
EGR1-201ENST00000239938 FLT4P35916 1363 aa16.64■□□□□ 0.25
EGR1-201ENST00000239938 SBNO1A3KN83 1393 aa16.64■□□□□ 0.25
EGR1-201ENST00000239938 GNAT3A8MTJ3 354 aa16.64■□□□□ 0.25
EGR1-201ENST00000239938 ME3Q16798 604 aa16.64■□□□□ 0.25
EGR1-201ENST00000239938 CNTROBQ8N137 903 aa16.64■□□□□ 0.25
EGR1-201ENST00000239938 UTP14CQ5TAP6 766 aaKnown RBP16.63■□□□□ 0.25
EGR1-201ENST00000239938 NECAB1Q8N987 351 aa16.63■□□□□ 0.25
EGR1-201ENST00000239938 FAM173BQ6P4H8 233 aa16.63■□□□□ 0.25
EGR1-201ENST00000239938 TTC6Q86TZ1 520 aa16.63■□□□□ 0.25
EGR1-201ENST00000239938 KIF1BPQ96EK5 621 aa16.63■□□□□ 0.25
EGR1-201ENST00000239938 ATP6V1DQ9Y5K8 247 aa16.63■□□□□ 0.25
EGR1-201ENST00000239938 FAM69CQ0P6D2 419 aa16.63■□□□□ 0.25
EGR1-201ENST00000239938 JAKMIP1Q96N16 626 aaKnown RBP16.63■□□□□ 0.25
EGR1-201ENST00000239938 PDRG1Q9NUG6 133 aa16.63■□□□□ 0.25
EGR1-201ENST00000239938 HTATSF1O43719 755 aaKnown RBP16.62■□□□□ 0.25
EGR1-201ENST00000239938 VPS53Q5VIR6 699 aa16.62■□□□□ 0.25
EGR1-201ENST00000239938 PRPF40BQ6NWY9 871 aaKnown RBP16.62■□□□□ 0.25
EGR1-201ENST00000239938 ANKRD7Q92527 254 aa16.62■□□□□ 0.25
EGR1-201ENST00000239938 ZSWIM6Q9HCJ5 1215 aa16.62■□□□□ 0.25
EGR1-201ENST00000239938 MRVI1Q9Y6F6 885 aa16.62■□□□□ 0.25
EGR1-201ENST00000239938 LIG1P18858 919 aa16.62■□□□□ 0.25
EGR1-201ENST00000239938 PTGS1P23219 599 aa16.62■□□□□ 0.25
EGR1-201ENST00000239938 PPP6R1Q9UPN7 881 aa16.62■□□□□ 0.25
EGR1-201ENST00000239938 MAP3K5Q99683 1374 aa16.62■□□□□ 0.25
EGR1-201ENST00000239938 AGLP35573 1532 aa16.62■□□□□ 0.25
EGR1-201ENST00000239938 CTIFO43310 598 aaKnown RBP16.61■□□□□ 0.25
EGR1-201ENST00000239938 CAMK4Q16566 473 aa16.61■□□□□ 0.25
EGR1-201ENST00000239938 VPS37CA5D8V6 355 aaPredicted RBP16.61■□□□□ 0.25
EGR1-201ENST00000239938 LUZP1Q86V48 1076 aa16.61■□□□□ 0.25
EGR1-201ENST00000239938 KCNB2Q92953 911 aa16.61■□□□□ 0.25
EGR1-201ENST00000239938 CHMP3Q9Y3E7 222 aa16.61■□□□□ 0.25
EGR1-201ENST00000239938 USP42Q9H9J4 1324 aaKnown RBP16.61■□□□□ 0.25
EGR1-201ENST00000239938 NWD1Q149M9 1564 aa16.61■□□□□ 0.25
EGR1-201ENST00000239938 HDGFL1Q5TGJ6 251 aa16.61■□□□□ 0.25
EGR1-201ENST00000239938 TPCN1Q9ULQ1 816 aa16.61■□□□□ 0.25
EGR1-201ENST00000239938 TAF7Q15545 349 aaPredicted RBP16.6■□□□□ 0.25
EGR1-201ENST00000239938 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
EGR1-201ENST00000239938 CDC37L1Q7L3B6 337 aa16.6■□□□□ 0.25
EGR1-201ENST00000239938 ADAMTS13Q76LX8 1427 aa16.6■□□□□ 0.25
EGR1-201ENST00000239938 CCDC192P0DO97 292 aa16.6■□□□□ 0.25
EGR1-201ENST00000239938 AMPHP49418 695 aa16.6■□□□□ 0.25
EGR1-201ENST00000239938 NECTIN1Q15223 517 aa16.6■□□□□ 0.25
EGR1-201ENST00000239938 KLHL34Q8N239 644 aa16.6■□□□□ 0.25
EGR1-201ENST00000239938 U2AF2P26368 475 aaKnown RBP eCLIP16.59■□□□□ 0.25
EGR1-201ENST00000239938 BEND3Q5T5X7 828 aa16.59■□□□□ 0.25
EGR1-201ENST00000239938 FERMT3Q86UX7 667 aa16.59■□□□□ 0.25
EGR1-201ENST00000239938 PDCL2Q8N4E4 241 aa16.59■□□□□ 0.25
EGR1-201ENST00000239938 NRBP1Q9UHY1 535 aa16.59■□□□□ 0.25
EGR1-201ENST00000239938 LRMPQ12912 555 aa16.59■□□□□ 0.25
EGR1-201ENST00000239938 FAM200AQ8TCP9 573 aa16.59■□□□□ 0.25
EGR1-201ENST00000239938 TYRO3Q06418 890 aa16.58■□□□□ 0.24
EGR1-201ENST00000239938 TM6SF1Q9BZW5 370 aa16.58■□□□□ 0.24
EGR1-201ENST00000239938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.58■□□□□ 0.24
EGR1-201ENST00000239938 SH2B1Q9NRF2 756 aaPredicted RBP16.58■□□□□ 0.24
EGR1-201ENST00000239938 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.24
EGR1-201ENST00000239938 CYP46A1Q9Y6A2 500 aa16.58■□□□□ 0.24
EGR1-201ENST00000239938 CKAP2LQ8IYA6 745 aa16.57■□□□□ 0.24
EGR1-201ENST00000239938 ZSCAN31Q96LW9 406 aaPredicted RBP16.57■□□□□ 0.24
EGR1-201ENST00000239938 PI4KAP2A4QPH2 592 aa16.57■□□□□ 0.24
EGR1-201ENST00000239938 GLRX3O76003 335 aaKnown RBP16.57■□□□□ 0.24
EGR1-201ENST00000239938 EIF2S2P20042 333 aaKnown RBP16.57■□□□□ 0.24
EGR1-201ENST00000239938 PI4KAP1Q8N8J0 262 aa16.57■□□□□ 0.24
EGR1-201ENST00000239938 TAF6LQ9Y6J9 622 aa16.57■□□□□ 0.24
EGR1-201ENST00000239938 TTC41PQ6P2S7 1318 aa16.57■□□□□ 0.24
EGR1-201ENST00000239938 PIK3C2AO00443 1686 aa16.57■□□□□ 0.24
EGR1-201ENST00000239938 ANXA1P04083 346 aa16.56■□□□□ 0.24
EGR1-201ENST00000239938 TPM3P06753 285 aa16.56■□□□□ 0.24
EGR1-201ENST00000239938 CCDC186Q7Z3E2 898 aa16.56■□□□□ 0.24
EGR1-201ENST00000239938 CBX8Q9HC52 389 aa16.56■□□□□ 0.24
EGR1-201ENST00000239938 RGPD8O14715 1765 aaPredicted RBP16.56■□□□□ 0.24
EGR1-201ENST00000239938 MAP3K11Q16584 847 aa16.56■□□□□ 0.24
EGR1-201ENST00000239938 LARP1BQ659C4 914 aaKnown RBP16.56■□□□□ 0.24
EGR1-201ENST00000239938 CHPF2Q9P2E5 772 aa16.56■□□□□ 0.24
EGR1-201ENST00000239938 TTC21AQ8NDW8 1320 aa16.56■□□□□ 0.24
EGR1-201ENST00000239938 NUP62CLQ9H1M0 184 aa16.56■□□□□ 0.24
EGR1-201ENST00000239938 DACT1Q9NYF0 836 aa16.56■□□□□ 0.24
EGR1-201ENST00000239938 NCBP1Q09161 790 aaKnown RBP16.55■□□□□ 0.24
EGR1-201ENST00000239938 FAM227BQ96M60 508 aa16.55■□□□□ 0.24
EGR1-201ENST00000239938 TCEANC2Q96MN5 208 aa16.55■□□□□ 0.24
EGR1-201ENST00000239938 ANO6Q4KMQ2 910 aa16.55■□□□□ 0.24
EGR1-201ENST00000239938 CREB3L3Q68CJ9 461 aa16.55■□□□□ 0.24
EGR1-201ENST00000239938 TFIP11Q9UBB9 837 aaKnown RBP16.55■□□□□ 0.24
EGR1-201ENST00000239938 PA2G4Q9UQ80 394 aaKnown RBP16.55■□□□□ 0.24
EGR1-201ENST00000239938 RBM8AQ9Y5S9 174 aaKnown RBP16.55■□□□□ 0.24
EGR1-201ENST00000239938 CCDC171Q6TFL3 1326 aa16.55■□□□□ 0.24
EGR1-201ENST00000239938 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
EGR1-201ENST00000239938 HOXC9P31274 260 aa16.54■□□□□ 0.24
EGR1-201ENST00000239938 DNAAF4Q8WXU2 420 aa16.54■□□□□ 0.24
EGR1-201ENST00000239938 ELP1O95163 1332 aa16.54■□□□□ 0.24
EGR1-201ENST00000239938 CHD2O14647 1828 aaKnown RBP16.54■□□□□ 0.24
EGR1-201ENST00000239938 TMEM2Q9UHN6 1383 aa16.54■□□□□ 0.24
EGR1-201ENST00000239938 GOLGA6L6A8MZA4 724 aa16.54■□□□□ 0.24
EGR1-201ENST00000239938 KCNQ3O43525 872 aa16.54■□□□□ 0.24
EGR1-201ENST00000239938 NAA30Q147X3 362 aaPredicted RBP16.54■□□□□ 0.24
EGR1-201ENST00000239938 USHBP1Q8N6Y0 703 aa16.54■□□□□ 0.24
EGR1-201ENST00000239938 ADCY9O60503 1353 aa16.54■□□□□ 0.24
EGR1-201ENST00000239938 KRT85P78386 507 aa16.54■□□□□ 0.24
EGR1-201ENST00000239938 CHAF1AQ13111 956 aaPredicted RBP16.54■□□□□ 0.24
EGR1-201ENST00000239938 PLA2G4DQ86XP0 818 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 207.8 ms