RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 GABPAQ06546 454 aa11.8□□□□□ -0.52
SLF2-201ENST00000238961 RASA3Q14644 834 aa11.8□□□□□ -0.52
SLF2-201ENST00000238961 MNAT1P51948 309 aa11.8□□□□□ -0.52
SLF2-201ENST00000238961 CCDC83Q8IWF9 413 aa11.8□□□□□ -0.52
SLF2-201ENST00000238961 PSPC1Q8WXF1 523 aaKnown RBP11.8□□□□□ -0.52
SLF2-201ENST00000238961 TOP1P11387 765 aaKnown RBP11.79□□□□□ -0.52
SLF2-201ENST00000238961 SETDB1Q15047 1291 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 PLVAPQ9BX97 442 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 CLIP2Q9UDT6 1046 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 AFG3L2Q9Y4W6 797 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 HMGB2P26583 209 aaKnown RBP11.79□□□□□ -0.52
SLF2-201ENST00000238961 TSHZ2Q9NRE2 1034 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 HYPKQ9NX55 129 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 SWAP70Q9UH65 585 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 PDE1CQ14123 709 aaPredicted RBP11.79□□□□□ -0.52
SLF2-201ENST00000238961 PTPN14Q15678 1187 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 CAMK4Q16566 473 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 CEP126Q9P2H0 1117 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 RAB3GAP2Q9H2M9 1393 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 HSF2BPO75031 334 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 ZFYP08048 801 aaPredicted RBP11.79□□□□□ -0.52
SLF2-201ENST00000238961 CALML4Q96GE6 196 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 PDRG1Q9NUG6 133 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 SFPQP23246 707 aaKnown RBP eCLIP11.79□□□□□ -0.52
SLF2-201ENST00000238961 AACSQ86V21 672 aa11.79□□□□□ -0.52
SLF2-201ENST00000238961 RANBP6O60518 1105 aaKnown RBP11.78□□□□□ -0.52
SLF2-201ENST00000238961 XRCC6P12956 609 aaKnown RBP eCLIP11.78□□□□□ -0.52
SLF2-201ENST00000238961 EEF2P13639 858 aaKnown RBP11.78□□□□□ -0.52
SLF2-201ENST00000238961 PRR16Q569H4 304 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 RBM28Q9NW13 759 aaKnown RBP11.78□□□□□ -0.52
SLF2-201ENST00000238961 MSL1Q68DK7 614 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 CCDC110Q8TBZ0 833 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 RUNDC1Q96C34 613 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 TTC12Q9H892 705 aaPredicted RBP11.78□□□□□ -0.52
SLF2-201ENST00000238961 GOLGA8AA7E2F4 631 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 GOLGA8BA8MQT2 603 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 PPP4R4Q6NUP7 873 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 CTCFLQ8NI51 663 aaPredicted RBP11.78□□□□□ -0.52
SLF2-201ENST00000238961 RPGRQ92834 1020 aaKnown RBP11.78□□□□□ -0.52
SLF2-201ENST00000238961 VAT1LQ9HCJ6 419 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 JADE2Q9NQC1 790 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 MGEA5O60502 916 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 PSMD6Q15008 389 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 UACAQ9BZF9 1416 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 IDEP14735 1019 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 GSDMBQ8TAX9 411 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 RAB3IPQ96QF0 476 aaPredicted RBP11.78□□□□□ -0.52
SLF2-201ENST00000238961 PLCB3Q01970 1234 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 VPS52Q8N1B4 723 aa11.78□□□□□ -0.52
SLF2-201ENST00000238961 TMEM110-MUSTN1A8MSY1 372 aa11.77□□□□□ -0.52
SLF2-201ENST00000238961 PPP2R5CQ13362 524 aa11.77□□□□□ -0.52
SLF2-201ENST00000238961 GAS2L2Q8NHY3 880 aa11.77□□□□□ -0.52
SLF2-201ENST00000238961 CCDC65Q8IXS2 484 aa11.77□□□□□ -0.52
SLF2-201ENST00000238961 C1orf115Q9H7X2 142 aa11.77□□□□□ -0.52
SLF2-201ENST00000238961 CCDC194A0A1B0GVG4 234 aa11.77□□□□□ -0.53
SLF2-201ENST00000238961 ATXN8OSP0DMR3 200 aa11.77□□□□□ -0.53
SLF2-201ENST00000238961 JAKMIP1Q96N16 626 aaKnown RBP11.77□□□□□ -0.53
SLF2-201ENST00000238961 TRIM7Q9C029 511 aa11.77□□□□□ -0.53
SLF2-201ENST00000238961 CASQ2O14958 399 aaPredicted RBP11.77□□□□□ -0.53
SLF2-201ENST00000238961 IFI16Q16666 785 aaKnown RBP11.77□□□□□ -0.53
SLF2-201ENST00000238961 NOP9Q86U38 636 aaKnown RBP11.77□□□□□ -0.53
SLF2-201ENST00000238961 DNAAF4Q8WXU2 420 aa11.77□□□□□ -0.53
SLF2-201ENST00000238961 CABP5Q9NP86 173 aa11.77□□□□□ -0.53
SLF2-201ENST00000238961 ATP2A1O14983 1001 aa11.77□□□□□ -0.53
SLF2-201ENST00000238961 METTL24Q5JXM2 366 aa11.77□□□□□ -0.53
SLF2-201ENST00000238961 CCDC50Q8IVM0 306 aa11.77□□□□□ -0.53
SLF2-201ENST00000238961 ZNF652Q9Y2D9 606 aa11.77□□□□□ -0.53
SLF2-201ENST00000238961 DIXDC1Q155Q3 683 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 CCDC172P0C7W6 258 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 GTF2F1P35269 517 aaKnown RBP eCLIP11.76□□□□□ -0.53
SLF2-201ENST00000238961 CCDC77Q9BR77 488 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 PHAXQ9H814 394 aaKnown RBP11.76□□□□□ -0.53
SLF2-201ENST00000238961 FAM114A2Q9NRY5 505 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 KRT13P13646 458 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 PROSER2Q86WR7 435 aaPredicted RBP11.76□□□□□ -0.53
SLF2-201ENST00000238961 A0A087WZG4 1122 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 TACC1O75410 805 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 ATF7IPQ6VMQ6 1270 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 PANK1Q8TE04 598 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 NUF2Q9BZD4 464 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 GIPC1O14908 333 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 AMPD3Q01432 767 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 SLF2Q8IX21 1173 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 PRDM10Q9NQV6 1147 aa11.76□□□□□ -0.53
SLF2-201ENST00000238961 STMN1P16949 149 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 PLS1Q14651 629 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 IMPG2Q9BZV3 1241 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 RASAL2Q9UJF2 1139 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 SPG7Q9UQ90 795 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 HMGB1P1B2RPK0 211 aaPredicted RBP11.75□□□□□ -0.53
SLF2-201ENST00000238961 CWC27Q6UX04 472 aaKnown RBP11.75□□□□□ -0.53
SLF2-201ENST00000238961 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.75□□□□□ -0.53
SLF2-201ENST00000238961 NCAPD3P42695 1498 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 LPXNO60711 386 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 CCDC170Q8IYT3 715 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 KIF18AQ8NI77 898 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 TBCAO75347 108 aaKnown RBP11.75□□□□□ -0.53
SLF2-201ENST00000238961 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 MCM10Q7L590 875 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 RNF34Q969K3 372 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms