RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ARHGEF10O15013 1369 aa14.48□□□□□ -0.09
CHPF2-201ENST00000035307 NUCB1Q02818 461 aa14.48□□□□□ -0.09
CHPF2-201ENST00000035307 HSP90AB4PQ58FF6 505 aa14.48□□□□□ -0.09
CHPF2-201ENST00000035307 BICC1Q9H694 974 aaKnown RBP14.48□□□□□ -0.09
CHPF2-201ENST00000035307 SDSP20132 328 aa14.47□□□□□ -0.09
CHPF2-201ENST00000035307 HSP90AB3PQ58FF7 597 aa14.47□□□□□ -0.09
CHPF2-201ENST00000035307 ARHGAP45Q92619 1136 aa14.47□□□□□ -0.09
CHPF2-201ENST00000035307 CEP126Q9P2H0 1117 aa14.47□□□□□ -0.09
CHPF2-201ENST00000035307 CD163L1Q9NR16 1453 aa14.47□□□□□ -0.09
CHPF2-201ENST00000035307 KIF13AQ9H1H9 1805 aa14.47□□□□□ -0.09
CHPF2-201ENST00000035307 HCLS1P14317 486 aaPredicted RBP14.47□□□□□ -0.09
CHPF2-201ENST00000035307 GRPEL1Q9HAV7 217 aa14.47□□□□□ -0.09
CHPF2-201ENST00000035307 C1orf167Q5SNV9 1468 aa14.46□□□□□ -0.09
CHPF2-201ENST00000035307 HTATSF1O43719 755 aaKnown RBP14.46□□□□□ -0.09
CHPF2-201ENST00000035307 RHPN1Q8TCX5 695 aa14.46□□□□□ -0.09
CHPF2-201ENST00000035307 DDX21Q9NR30 783 aaKnown RBP eCLIP14.46□□□□□ -0.09
CHPF2-201ENST00000035307 JAG2Q9Y219 1238 aa14.46□□□□□ -0.09
CHPF2-201ENST00000035307 CEP170BQ9Y4F5 1589 aaPredicted RBP14.46□□□□□ -0.09
CHPF2-201ENST00000035307 METTL24Q5JXM2 366 aa14.46□□□□□ -0.09
CHPF2-201ENST00000035307 TCEANC2Q96MN5 208 aa14.46□□□□□ -0.09
CHPF2-201ENST00000035307 USP21Q9UK80 565 aa14.46□□□□□ -0.09
CHPF2-201ENST00000035307 ZNF853P0CG23 659 aa14.46□□□□□ -0.1
CHPF2-201ENST00000035307 SLC4A8Q2Y0W8 1093 aa14.46□□□□□ -0.1
CHPF2-201ENST00000035307 USP44Q9H0E7 712 aa14.46□□□□□ -0.1
CHPF2-201ENST00000035307 PCDH11XQ9BZA7 1347 aa14.45□□□□□ -0.1
CHPF2-201ENST00000035307 PCDH11YQ9BZA8 1340 aa14.45□□□□□ -0.1
CHPF2-201ENST00000035307 KIF1BPQ96EK5 621 aa14.45□□□□□ -0.1
CHPF2-201ENST00000035307 JAKMIP1Q96N16 626 aaKnown RBP14.45□□□□□ -0.1
CHPF2-201ENST00000035307 ZC3H13Q5T200 1668 aaKnown RBP14.45□□□□□ -0.1
CHPF2-201ENST00000035307 CHAF1AQ13111 956 aaPredicted RBP14.45□□□□□ -0.1
CHPF2-201ENST00000035307 HDAC1Q13547 482 aaPredicted RBP14.45□□□□□ -0.1
CHPF2-201ENST00000035307 DDX46Q7L014 1031 aaKnown RBP14.45□□□□□ -0.1
CHPF2-201ENST00000035307 ABCF2Q9UG63 623 aa14.45□□□□□ -0.1
CHPF2-201ENST00000035307 BMP2KLQ5H9B9 411 aa14.45□□□□□ -0.1
CHPF2-201ENST00000035307 CWC25Q9NXE8 425 aaPredicted RBP14.45□□□□□ -0.1
CHPF2-201ENST00000035307 FER1L4A9Z1Z3 1794 aa14.45□□□□□ -0.1
CHPF2-201ENST00000035307 IDH1O75874 414 aaKnown RBP14.44□□□□□ -0.1
CHPF2-201ENST00000035307 FAM13BQ9NYF5 915 aa14.44□□□□□ -0.1
CHPF2-201ENST00000035307 TIMM10P62072 90 aa14.44□□□□□ -0.1
CHPF2-201ENST00000035307 EDC3Q96F86 508 aaKnown RBP14.44□□□□□ -0.1
CHPF2-201ENST00000035307 RAD21O60216 631 aa14.44□□□□□ -0.1
CHPF2-201ENST00000035307 LDHAL6AQ6ZMR3 332 aa14.44□□□□□ -0.1
CHPF2-201ENST00000035307 SUCLG2Q96I99 432 aa14.44□□□□□ -0.1
CHPF2-201ENST00000035307 DZIP3Q86Y13 1208 aaKnown RBP14.43□□□□□ -0.1
CHPF2-201ENST00000035307 LRRC7Q96NW7 1537 aa14.43□□□□□ -0.1
CHPF2-201ENST00000035307 SYCE3A1L190 88 aa14.43□□□□□ -0.1
CHPF2-201ENST00000035307 LINS1Q8NG48 757 aa14.43□□□□□ -0.1
CHPF2-201ENST00000035307 RBM27Q9P2N5 1060 aaKnown RBP14.43□□□□□ -0.1
CHPF2-201ENST00000035307 ATP2B1P20020 1258 aa14.43□□□□□ -0.1
CHPF2-201ENST00000035307 TTC39AQ5SRH9 613 aa14.43□□□□□ -0.1
CHPF2-201ENST00000035307 PRPF40BQ6NWY9 871 aaKnown RBP14.43□□□□□ -0.1
CHPF2-201ENST00000035307 NIP7Q9Y221 180 aaKnown RBP eCLIP14.43□□□□□ -0.1
CHPF2-201ENST00000035307 PNPLA6Q8IY17 1366 aa14.43□□□□□ -0.1
CHPF2-201ENST00000035307 CASTP20810 708 aaKnown RBP14.42□□□□□ -0.1
CHPF2-201ENST00000035307 ATP8B2P98198 1209 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 RNF20Q5VTR2 975 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 SIRT2Q8IXJ6 389 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 FAM43AQ8N2R8 423 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 DDX11Q96FC9 970 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 KCNQ2O43526 872 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 ZPR1O75312 459 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 IFIT5Q13325 482 aaKnown RBP14.42□□□□□ -0.1
CHPF2-201ENST00000035307 RRP12Q5JTH9 1297 aaKnown RBP14.42□□□□□ -0.1
CHPF2-201ENST00000035307 CPLX1O14810 134 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 PDE1AP54750 535 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 CCDC83Q8IWF9 413 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 ZNF592Q92610 1267 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 R3HCC1Q9Y3T6 440 aaKnown RBP14.42□□□□□ -0.1
CHPF2-201ENST00000035307 ATP6V1DQ9Y5K8 247 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 CDK12Q9NYV4 1490 aaPredicted RBP14.42□□□□□ -0.1
CHPF2-201ENST00000035307 WDR17Q8IZU2 1322 aa14.42□□□□□ -0.1
CHPF2-201ENST00000035307 SMC5Q8IY18 1101 aa14.41□□□□□ -0.1
CHPF2-201ENST00000035307 SYNE4Q8N205 404 aa14.41□□□□□ -0.1
CHPF2-201ENST00000035307 GOLIM4O00461 696 aa14.41□□□□□ -0.1
CHPF2-201ENST00000035307 TTC22Q5TAA0 569 aa14.41□□□□□ -0.1
CHPF2-201ENST00000035307 DCTPP1Q9H773 170 aa14.41□□□□□ -0.1
CHPF2-201ENST00000035307 DIP2AQ14689 1571 aa14.41□□□□□ -0.1
CHPF2-201ENST00000035307 PLEKHM2Q8IWE5 1019 aa14.41□□□□□ -0.1
CHPF2-201ENST00000035307 SPC24Q8NBT2 197 aa14.41□□□□□ -0.1
CHPF2-201ENST00000035307 ARHGEF28Q8N1W1 1705 aaKnown RBP14.41□□□□□ -0.1
CHPF2-201ENST00000035307 BECN2A8MW95 431 aa14.4□□□□□ -0.1
CHPF2-201ENST00000035307 SAMD1Q6SPF0 538 aaPredicted RBP14.4□□□□□ -0.1
CHPF2-201ENST00000035307 PIGBQ92521 554 aa14.4□□□□□ -0.1
CHPF2-201ENST00000035307 ZGPATQ8N5A5 531 aaKnown RBP14.4□□□□□ -0.1
CHPF2-201ENST00000035307 GNPATO15228 680 aa14.4□□□□□ -0.1
CHPF2-201ENST00000035307 RAB11FIP4Q86YS3 637 aa14.39□□□□□ -0.11
CHPF2-201ENST00000035307 ZBTB1Q9Y2K1 713 aa14.39□□□□□ -0.11
CHPF2-201ENST00000035307 TFCP2Q12800 502 aa14.39□□□□□ -0.11
CHPF2-201ENST00000035307 UBE2Q2Q8WVN8 375 aa14.39□□□□□ -0.11
CHPF2-201ENST00000035307 TMX4Q9H1E5 349 aaPredicted RBP14.39□□□□□ -0.11
CHPF2-201ENST00000035307 HSP90AA2PQ14568 343 aaPredicted RBP14.38□□□□□ -0.11
CHPF2-201ENST00000035307 OVOS2A0A0J9YW53 1432 aa14.38□□□□□ -0.11
CHPF2-201ENST00000035307 OVOS2Q6IE36 1432 aa14.38□□□□□ -0.11
CHPF2-201ENST00000035307 CDC42BPGQ6DT37 1551 aa14.38□□□□□ -0.11
CHPF2-201ENST00000035307 CPA1P15085 419 aa14.38□□□□□ -0.11
CHPF2-201ENST00000035307 CSPP1Q1MSJ5 1256 aa14.38□□□□□ -0.11
CHPF2-201ENST00000035307 CCDC158Q5M9N0 1113 aa14.38□□□□□ -0.11
CHPF2-201ENST00000035307 CHAMP1Q96JM3 812 aa14.38□□□□□ -0.11
CHPF2-201ENST00000035307 CYP46A1Q9Y6A2 500 aa14.38□□□□□ -0.11
CHPF2-201ENST00000035307 GOLGA6L6A8MZA4 724 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms