RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Prkar2bP31324 416 aa17.48■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Mcm6P97311 821 aa17.48■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Ccdc66Q6NS45 935 aa17.48■□□□□ 0.39
Ebf3-208ENSMUST00000210774 EcsitQ9QZH6 435 aa17.48■□□□□ 0.39
Ebf3-208ENSMUST00000210774 CenpjQ569L8 1344 aa17.47■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Rassf4Q8CB96 322 aa17.47■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Iqca1Q9CUL5 857 aa17.47■□□□□ 0.39
Ebf3-208ENSMUST00000210774 PplQ9R269 1755 aa17.47■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Smarce1O54941 411 aaKnown RBP17.47■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Hmx1O70218 332 aa17.47■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Frat2Q8K025 231 aa17.47■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Slc12a5Q91V14 1138 aa17.47■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Atp2b1G5E829 1220 aa17.46■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Cdk19Q8BWD8 501 aa17.46■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Vps33aQ9D2N9 598 aa17.46■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Ranbp1P34022 203 aaKnown RBP17.46■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Paxbp1P58501 919 aa17.46■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Rab11fip3Q8CHD8 1047 aa17.46■□□□□ 0.39
Ebf3-208ENSMUST00000210774 Prrc2bQ7TPM1 1486 aaKnown RBP17.46■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Actn3O88990 900 aaKnown RBP17.46■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Bicd2Q921C5 820 aa17.46■□□□□ 0.38
Ebf3-208ENSMUST00000210774 TnmdQ9EP64 317 aa17.46■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Lrrc7Q80TE7 1490 aa17.45■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Btn2a2A4QPC6 514 aa17.45■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Utp18Q5SSI6 552 aaKnown RBP17.45■□□□□ 0.38
Ebf3-208ENSMUST00000210774 PdcQ9QW08 244 aa17.45■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Recql4Q75NR7 1216 aaKnown RBP17.45■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Spag5Q7TME2 1165 aa17.44■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Myo1cQ9WTI7 1063 aa17.44■□□□□ 0.38
Ebf3-208ENSMUST00000210774 RargP18911 458 aaKnown RBP17.44■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Lrrc8aQ80WG5 810 aa17.44■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Mlh1Q9JK91 760 aa17.44■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Mcm10Q0VBD2 885 aa17.43■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Ptpdc1Q6NZK8 747 aa17.43■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Ppm1eQ80TL0 749 aa17.43■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Trap1aP19473 224 aa17.43■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Rfc1P35601 1131 aa17.42■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Psme1P97371 249 aa17.42■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Gjb2Q00977 226 aa17.42■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Rufy3Q9D394 469 aa17.42■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Cfdp1O88271 295 aaKnown RBP17.42■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Cfap58B2RW38 873 aa17.41■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Zkscan2G3X952 960 aa17.41■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Hmgn5Q9JL35 406 aa17.41■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Surf1P09925 306 aa17.41■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Ddx19aQ61655 478 aaKnown RBP17.41■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Tsr2Q8C8T8 191 aa17.41■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Ddx27Q921N6 760 aaKnown RBP17.4■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Golga5Q9QYE6 729 aa17.4■□□□□ 0.38
Ebf3-208ENSMUST00000210774 PtprmP28828 1452 aa17.4■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Wdr33Q8K4P0 1330 aaKnown RBP17.4■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Gsto1O09131 240 aa17.4■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Zkscan4Q5SZT6 480 aa17.4■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Ints3Q7TPD0 1041 aaKnown RBP17.4■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Gdap1l1Q8VE33 370 aa17.4■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Strn4P58404 760 aa17.4■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Tm6sf1P58749 370 aa17.4■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Sh3bgrQ9WUZ7 214 aa17.4■□□□□ 0.38
Ebf3-208ENSMUST00000210774 PalldQ9ET54 1408 aa17.39■□□□□ 0.38
Ebf3-208ENSMUST00000210774 Evi5lH3BKQ3 813 aa17.39■□□□□ 0.37
Ebf3-208ENSMUST00000210774 CrebrfQ8CDG5 640 aaKnown RBP17.39■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Lonp2Q9DBN5 852 aa17.39■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Arhgef28P97433 1693 aa17.39■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Vps18Q8R307 973 aa17.39■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Cabp2Q9JLK4 216 aa17.39■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Ap3b2Q9JME5 1082 aa17.39■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Speer4f2E9Q366 295 aa17.38■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Esyt1Q3U7R1 1092 aaKnown RBP17.38■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Nap1l3Q794H2 544 aa17.38■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Brd2Q7JJ13 798 aaKnown RBP17.38■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Kif24Q6NWW5 1356 aa17.38■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Gnai1B2RSH2 354 aa17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Ms4a1P19437 291 aa17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 H2afxP27661 143 aaKnown RBP17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Syt1P46096 421 aa17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Gnai3Q9DC51 354 aa17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Cep170bQ80U49 1574 aa17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Arap3Q8R5G7 1538 aa17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Znf568E9PYI1 671 aa17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Lnx1O70263 728 aa17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Nol10Q5RJG1 687 aaKnown RBP17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Creld2Q9CYA0 350 aa17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Klra1P20937 262 aa17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Slc52a2Q9D8F3 450 aa17.37■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Dip2aQ8BWT5 1523 aa17.36■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Chrm1P12657 460 aa17.36■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Lins1Q3U1D0 764 aa17.36■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Tsen34Q8BMZ5 316 aa17.36■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Ciz1Q8VEH2 845 aa17.36■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Snw1Q9CSN1 536 aaKnown RBP17.36■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Ccdc7Q9D541 371 aa17.36■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Ccdc102aQ3TMW1 549 aa17.36■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Dnaaf2Q8BPI1 814 aa17.36■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Tceanc2Q8R2M0 207 aa17.36■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Ncbp3Q8BZR9 615 aaKnown RBP17.35■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Igbp1bQ9QZ29 343 aa17.35■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Anapc15P60007 132 aa17.35■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Srgap3Q812A2 1099 aa17.35■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Trak2Q6P9N8 913 aa17.34■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Ttc27Q8CD92 847 aa17.34■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms