RNA–Protein interactions for RNA: ENSMUST00000113870.2

Tsc1-204, Transcript of Hamartin, mouse

APPRIS P3 TSL 1 (best) BASIC

Gene Tsc1, Length 7,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Tsc1-204	ENSMUST00000113870	Bms1	Q6PGF5	1284 aa	Known RBP	11.37	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Apol7c	Q8C6E1	369 aa		11.37	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Ssx2ip	Q8VC66	615 aa		11.37	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Adnp	Q9Z103	1108 aa	Known RBP	11.37	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Rasal2	E9PW37	1286 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Gjc1	P28229	396 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Fam177a1	Q8BR63	207 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Ca8	P28651	291 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Lyar	Q08288	388 aa	Known RBP	11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Gpkow	Q56A08	488 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Smarcc1	P97496	1104 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Cfap57	Q9D180	1249 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Sos1	Q62245	1319 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Ccdc6	D3YZP9	469 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Vps41	Q5KU39	853 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Ppp1r9b	Q6R891	817 aa	Known RBP	11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Rapgef3	Q8VCC8	918 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Rcan3	Q9JKK0	239 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Arl1	P61211	181 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Hs2st1	Q8R3H7	356 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Lamc3	Q9R0B6	1581 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Mcm3	P25206	812 aa	Known RBP	11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Gimap5	Q8BWF2	308 aa		11.36	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Ces1a	E9PYP1	563 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Stmn4	P63042	189 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Vezt	Q3ZK22	780 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Atp10d	Q8K2X1	1416 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Gse1	Q3U3C9	1213 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Limch1	Q3UH68	1057 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Ehbp1	Q69ZW3	1231 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Pkd2l2	Q9JLG4	621 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Sh2d4b	A6X942	431 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Epb41l2	O70318	988 aa	Known RBP	11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Ncapd3	Q6ZQK0	1506 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Rbm27	Q5SFM8	1060 aa	Known RBP	11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Cep135	Q6P5D4	1140 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Krt23	Q99PS0	422 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Tacc3	Q9JJ11	631 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Cdr1	E9Q0B4	517 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Mtus1	Q5HZI1	1210 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Taok3	Q8BYC6	898 aa		11.35	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Mnat1	P51949	309 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Fam107b	Q3TGF2	131 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Maco1	Q7TQE6	664 aa	Known RBP	11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Tbc1d7	Q9D0K0	293 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Igbp1b	Q9QZ29	343 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Dzip1l	Q499E4	774 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Cfap100	Q80VN0	613 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Cep19	Q9CQA8	163 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Ltv1	Q6NSQ7	470 aa	Known RBP	11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Sec62	Q8BU14	398 aa	Known RBP	11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Baiap2l1	Q9DBJ3	514 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Bag3	Q9JLV1	577 aa	Known RBP	11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Psmc4	P54775	418 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Ssrp1	Q08943	708 aa	Known RBP	11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Ccdc129	Q14B48	1034 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Specc1l	Q2KN98	1118 aa	Known RBP	11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Clip2	Q9Z0H8	1047 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Atp2b1	G5E829	1220 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Krt15	Q61414	452 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Tmod2	Q9JKK7	351 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Top2b	Q64511	1612 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Trap1a	P19473	224 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Pdcl2	Q78Y63	240 aa		11.34	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Tmem266	Q8BZB3	538 aa		11.33	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Zbtb22	Q9Z0G7	638 aa		11.33	□□□□□ -0.59
Tsc1-204	ENSMUST00000113870	Pus7	B7ZNL8	666 aa	Known RBP	11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Klc3	Q91W40	508 aa		11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Ktn1	Q61595	1327 aa	Known RBP	11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Bicd1	Q8BR07	835 aa		11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Plagl1	Q9JLQ4	704 aa		11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Ccdc12	Q8R344	166 aa	Known RBP	11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Diaph1	O08808	1255 aa		11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Cct2	P80314	535 aa	Known RBP	11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Usp37	Q8C0R0	979 aa		11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Mx2	Q9WVP9	655 aa		11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Fer	P70451	823 aa		11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Tmpo	Q61033	693 aa	Known RBP	11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Slc52a2	Q9D8F3	450 aa		11.33	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Adcy5	P84309	1262 aa		11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Ift74	Q8BKE9	600 aa		11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Aqr	Q8CFQ3	1481 aa	Known RBP	11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Zfx	P17012	799 aa		11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Snx25	Q3ZT31	840 aa		11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Kcnh5	Q920E3	988 aa		11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Riok3	Q9DBU3	519 aa	Known RBP	11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Wdr63	B2RY71	923 aa		11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Zscan29	E9Q5B4	869 aa		11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Mrpl44	Q9CY73	333 aa	Known RBP	11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Klhl10	Q9D5V2	608 aa		11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Fam204a	Q8C6C7	236 aa		11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Bin1	O08539	588 aa	Known RBP	11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Mapkbp1	Q6NS57	1503 aa		11.32	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Bloc1s2	Q9CWG9	143 aa		11.31	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Wwc1	Q5SXA9	1104 aa		11.31	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Jmjd4	Q8BFT6	427 aa		11.31	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Krt79	Q8VED5	531 aa		11.31	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Usp11	Q99K46	921 aa		11.31	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Haus2	Q9CQS9	234 aa		11.31	□□□□□ -0.6
Tsc1-204	ENSMUST00000113870	Mroh7	A2AVR2	1279 aa		11.31	□□□□□ -0.6

Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms