RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Rpn1Q91YQ5 608 aaKnown RBP10.99□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Q9CR55 154 aa10.99□□□□□ -0.65
Upf3b-201ENSMUST00000076265 CenphQ9QYM8 241 aa10.99□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Tdrd9Q14BI7 1383 aa10.99□□□□□ -0.65
Upf3b-201ENSMUST00000076265 OvosQ3UU35 1456 aa10.99□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Tspan7Q62283 249 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Vps72Q62481 368 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Nr6a1Q64249 495 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Peg3Q3URU2 1571 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 AU015836B2RUM3 263 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Ankrd33bQ3U0L2 486 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Sez6lQ6P1D5 963 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Prr18Q6PAN7 307 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Rnf168Q80XJ2 565 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 ClasrpQ8CFC7 668 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Slfn14V9GXG1 899 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Kidins220E9Q9B7 1793 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Ptch1Q61115 1434 aa10.98□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Gm5483B2RV77 97 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Klhl33G3UW92 533 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Sept2P42208 361 aaKnown RBP10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Rassf1Q99MK9 340 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Pus10Q9D3U0 527 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Yeats2Q3TUF7 1407 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Tiam1Q60610 1591 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Zfp788E9Q980 884 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Ppfia3P60469 1194 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 EnahQ03173 802 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Rexo1Q7TT28 1213 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 SowahdQ8BY98 327 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 SynpoQ8CC35 929 aaKnown RBP10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 GnalQ8CGK7 381 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 UvssaQ9D479 717 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Qser1A2BIE1 1698 aa10.97□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Stat1P42225 749 aa10.96□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Ccdc125Q5U465 500 aa10.96□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Kif2bQ8C0N1 668 aa10.96□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Mrpl11Q9CQF0 192 aaKnown RBP10.96□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Gm6268A2A3U9 297 aa10.96□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Trappc10Q3TLI0 1259 aa10.96□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Slfnl1Q8BHW9 410 aa10.96□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Smc2Q8CG48 1191 aaKnown RBP10.96□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Abcc3B2RX12 1523 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Ccdc146E9Q9F7 977 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Tnni2P13412 182 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Nell1Q2VWQ2 810 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Osbpl2Q8BX94 484 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Trim52Q8CDV4 233 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Golga2Q921M4 999 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Cyb5rlB1AS42 316 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Prrt4B2RU40 902 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Gspt2Q149F3 632 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Ssh1Q76I79 1042 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Triml1Q8BVP1 470 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Tut1Q8R3F9 869 aa10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Kif14L0N7N1 1674 aaKnown RBP10.95□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Atp10aO54827 1508 aa10.94□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Pdcd11Q6NS46 1862 aaKnown RBP10.94□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Clk1P22518 483 aa10.94□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Cypt1Q8CH20 168 aa10.94□□□□□ -0.66
Upf3b-201ENSMUST00000076265 MrgbpQ9DAT2 204 aa10.94□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Sart1Q9Z315 806 aaKnown RBP10.94□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Adamtsl3G3UXC7 1706 aa10.94□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Kdm5cP41230 1554 aa10.94□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Ccnb3Q810T2 1396 aa10.94□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Inf2Q0GNC1 1273 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 MarsQ68FL6 902 aaKnown RBP10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Msl1Q6PDM1 616 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Dars2Q8BIP0 653 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Paf1Q8K2T8 535 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 SrrtQ99MR6 875 aaKnown RBP10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 EspnQ9ET47 871 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Lmtk2Q3TYD6 1471 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Brwd3A2AHJ4 1799 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Ccdc85cE9Q6B2 420 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Zc3h7bF8VPP8 982 aaKnown RBP10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Cyp2c68K7N6C2 491 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Yap1P46938 488 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Hoxc13P50207 328 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Usp5P56399 858 aaKnown RBP10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Setd4P58467 439 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Gm5591Q8CDK1 855 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Vps37aQ8CHS8 397 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Kdm4bQ91VY5 1086 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Sytl1Q99N80 567 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Cwc25Q9DBF7 416 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Gm32742A0A1B0GT42 1604 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Adcy10Q8C0T9 1614 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Caskin1Q6P9K8 1431 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 NpatQ8BMA5 1420 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Dip2cE9PWR4 1557 aa10.93□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Arhgef40Q3UPH7 1517 aa10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Ttc30a2A2AKQ8 664 aa10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Zfp277E9Q6D6 583 aaKnown RBP10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Spata31E9QAF0 1014 aa10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Ankrd65F6YK91 380 aa10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Pou3f3P31361 497 aa10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Prpf38aQ4FK66 312 aaKnown RBP10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Ube2q1Q7TSS2 422 aa10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Dnajc6Q80TZ3 938 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 119.3 ms