Protein–RNA interactions for Protein: Q2VWQ2

Nell1, Protein kinase C-binding protein NELL1, mousemouse

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nell1Q2VWQ2 Gm25239-201ENSMUST00000174915 86 ntBASIC38.11■■■■□ 3.69
Nell1Q2VWQ2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
Nell1Q2VWQ2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Nell1Q2VWQ2 Gm24109-201ENSMUST00000175489 103 ntBASIC33.25■■■□□ 2.91
Nell1Q2VWQ2 Gm15042-201ENSMUST00000120212 883 ntBASIC32.86■■■□□ 2.85
Nell1Q2VWQ2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Nell1Q2VWQ2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Nell1Q2VWQ2 Gm15045-201ENSMUST00000117359 883 ntBASIC32.1■■■□□ 2.73
Nell1Q2VWQ2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Nell1Q2VWQ2 Gm23366-201ENSMUST00000175022 89 ntBASIC31.77■■■□□ 2.68
Nell1Q2VWQ2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Nell1Q2VWQ2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Nell1Q2VWQ2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.14■■■□□ 2.58
Nell1Q2VWQ2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.84■■■□□ 2.53
Nell1Q2VWQ2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Nell1Q2VWQ2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.81■■■□□ 2.52
Nell1Q2VWQ2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Nell1Q2VWQ2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Nell1Q2VWQ2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Nell1Q2VWQ2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Nell1Q2VWQ2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Nell1Q2VWQ2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
Nell1Q2VWQ2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Nell1Q2VWQ2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.27■■■□□ 2.44
Nell1Q2VWQ2 Gm25238-201ENSMUST00000174914 89 ntBASIC30.24■■■□□ 2.43
Nell1Q2VWQ2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Nell1Q2VWQ2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
Nell1Q2VWQ2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Nell1Q2VWQ2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.54■■■□□ 2.32
Nell1Q2VWQ2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Nell1Q2VWQ2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Nell1Q2VWQ2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
Nell1Q2VWQ2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Nell1Q2VWQ2 Psd-208ENSMUST00000224556 2034 ntBASIC29.42■■■□□ 2.3
Nell1Q2VWQ2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.28■■■□□ 2.28
Nell1Q2VWQ2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.2■■■□□ 2.26
Nell1Q2VWQ2 Gm25262-201ENSMUST00000174934 133 ntBASIC29.17■■■□□ 2.26
Nell1Q2VWQ2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Nell1Q2VWQ2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
Nell1Q2VWQ2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Nell1Q2VWQ2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Nell1Q2VWQ2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Nell1Q2VWQ2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.95■■■□□ 2.22
Nell1Q2VWQ2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Nell1Q2VWQ2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.89■■■□□ 2.22
Nell1Q2VWQ2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.85■■■□□ 2.21
Nell1Q2VWQ2 Gm27325-201ENSMUST00000175467 74 ntBASIC28.76■■■□□ 2.19
Nell1Q2VWQ2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Nell1Q2VWQ2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.66■■■□□ 2.18
Nell1Q2VWQ2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Nell1Q2VWQ2 Gm26115-201ENSMUST00000175605 87 ntBASIC28.63■■■□□ 2.17
Nell1Q2VWQ2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Nell1Q2VWQ2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
Nell1Q2VWQ2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.52■■■□□ 2.16
Nell1Q2VWQ2 Rab21-202ENSMUST00000218831 843 ntBASIC28.51■■■□□ 2.15
Nell1Q2VWQ2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.48■■■□□ 2.15
Nell1Q2VWQ2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Nell1Q2VWQ2 Gm8109-201ENSMUST00000194076 746 ntBASIC28.39■■■□□ 2.14
Nell1Q2VWQ2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.37■■■□□ 2.13
Nell1Q2VWQ2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Nell1Q2VWQ2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Nell1Q2VWQ2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Nell1Q2VWQ2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Nell1Q2VWQ2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Nell1Q2VWQ2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
Nell1Q2VWQ2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Nell1Q2VWQ2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Nell1Q2VWQ2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Nell1Q2VWQ2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.12■■■□□ 2.09
Nell1Q2VWQ2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Nell1Q2VWQ2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28■■■□□ 2.07
Nell1Q2VWQ2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.98■■■□□ 2.07
Nell1Q2VWQ2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Nell1Q2VWQ2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Nell1Q2VWQ2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.82■■■□□ 2.04
Nell1Q2VWQ2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Nell1Q2VWQ2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.75■■■□□ 2.03
Nell1Q2VWQ2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.74■■■□□ 2.03
Nell1Q2VWQ2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Nell1Q2VWQ2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Nell1Q2VWQ2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Nell1Q2VWQ2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.68■■■□□ 2.02
Nell1Q2VWQ2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Nell1Q2VWQ2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Nell1Q2VWQ2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Nell1Q2VWQ2 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.62■■■□□ 2.01
Nell1Q2VWQ2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Nell1Q2VWQ2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Nell1Q2VWQ2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Nell1Q2VWQ2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Nell1Q2VWQ2 Gm24804-201ENSMUST00000174982 85 ntBASIC27.49■■□□□ 1.99
Nell1Q2VWQ2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.46■■□□□ 1.99
Nell1Q2VWQ2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Nell1Q2VWQ2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.37■■□□□ 1.97
Nell1Q2VWQ2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Nell1Q2VWQ2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Nell1Q2VWQ2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
Nell1Q2VWQ2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.29■■□□□ 1.96
Nell1Q2VWQ2 Gm27322-201ENSMUST00000184007 104 ntBASIC27.28■■□□□ 1.96
Nell1Q2VWQ2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms