RNA–Protein interactions for RNA: ENSMUST00000039144.6

Clstn1-201, Transcript of Calsyntenin-1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clstn1, Length 3,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn1-201ENSMUST00000039144 MpndQ3TV65 487 aa18.28■□□□□ 0.52
Clstn1-201ENSMUST00000039144 Zbtb22Q9Z0G7 638 aa18.28■□□□□ 0.52
Clstn1-201ENSMUST00000039144 Gnai1B2RSH2 354 aa18.27■□□□□ 0.52
Clstn1-201ENSMUST00000039144 Gnai3Q9DC51 354 aa18.27■□□□□ 0.52
Clstn1-201ENSMUST00000039144 Tjp1P39447 1745 aaKnown RBP18.27■□□□□ 0.52
Clstn1-201ENSMUST00000039144 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.27■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Gm10471E9Q1C7 252 aa18.26■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Erc2Q6PH08 957 aa18.26■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Nwd2Q6P5U7 1742 aa18.26■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Tbc1d31Q6NXY1 996 aa18.26■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Mrps27Q8BK72 415 aaKnown RBP18.26■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Lrp6O88572 1613 aa18.26■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Mx2Q9WVP9 655 aa18.26■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Tm6sf1P58749 370 aa18.25■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Adcy5P84309 1262 aa18.25■□□□□ 0.51
Clstn1-201ENSMUST00000039144 HnrnpuQ8VEK3 800 aaKnown RBP18.25■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Slc5a4bQ91ZP4 660 aa18.25■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Prkar2bP31324 416 aa18.25■□□□□ 0.51
Clstn1-201ENSMUST00000039144 ThemisQ8BGW0 636 aa18.25■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Fam43aQ8BUP8 424 aa18.25■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Chmp4bQ9D8B3 224 aaKnown RBP18.25■□□□□ 0.51
Clstn1-201ENSMUST00000039144 SrrtQ99MR6 875 aaKnown RBP18.24■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Cyp46a1Q9WVK8 500 aa18.24■□□□□ 0.51
Clstn1-201ENSMUST00000039144 EvcP57680 1005 aa18.23■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Nxf2Q4ZGD8 691 aa18.23■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Igsf1Q7TQA1 1317 aa18.23■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Snap23O09044 210 aa18.23■□□□□ 0.51
Clstn1-201ENSMUST00000039144 CgnP59242 1191 aa18.23■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Msh6P54276 1358 aaKnown RBP18.22■□□□□ 0.51
Clstn1-201ENSMUST00000039144 RestQ8VIG1 1082 aa18.22■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Zranb3Q6NZP1 1069 aa18.22■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Casc1Q6TDU8 730 aa18.22■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Cntnap1O54991 1385 aa18.22■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Mcm2P97310 904 aa18.21■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Tiam2Q6ZPF3 1715 aa18.21■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Rtf1A2AQ19 715 aaKnown RBP18.21■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Hvcn1Q3U2S8 269 aa18.21■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Kcnf1Q7TSH7 493 aa18.21■□□□□ 0.51
Clstn1-201ENSMUST00000039144 Tomm22Q9CPQ3 142 aa18.21■□□□□ 0.51
Clstn1-201ENSMUST00000039144 U2af2P26369 475 aaKnown RBP18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 EappQ5BU09 281 aa18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Tbc1d30Q69ZT9 766 aa18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Ddx54Q8K4L0 874 aaKnown RBP18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Kiaa0754Q69ZZ9 979 aa18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Zfp251Q6PCX8 632 aa18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Plcd3Q8K2J0 785 aa18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 PtmsQ9D0J8 101 aaKnown RBP18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Utp3Q9JI13 469 aaKnown RBP18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Zeb2Q9R0G7 1215 aa18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Zpr1Q62384 459 aa18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Filip1lQ6P6L0 1131 aa18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Samm50Q8BGH2 469 aa18.2■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Mst1rQ62190 1378 aa18.19■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Ltbp1Q8CG19 1712 aa18.19■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Nfatc2ipO09130 412 aa18.19■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Gtf3c5Q8R2T8 520 aa18.19■□□□□ 0.5
Clstn1-201ENSMUST00000039144 DpydQ8CHR6 1025 aa18.19■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Mcm3P25206 812 aaKnown RBP18.18■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Kif3aP28741 701 aa18.18■□□□□ 0.5
Clstn1-201ENSMUST00000039144 F2rP30558 430 aa18.18■□□□□ 0.5
Clstn1-201ENSMUST00000039144 4930572O03RikQ8C5Y0 211 aa18.18■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Abca3Q8R420 1704 aa18.18■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Elmsan1E9Q2I4 1089 aaKnown RBP18.18■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Nkx2-3P97334 362 aa18.18■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Ssfa2Q922B9 1252 aa18.18■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Hmox1P14901 289 aa18.18■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Aldh1l2Q8K009 923 aa18.18■□□□□ 0.5
Clstn1-201ENSMUST00000039144 LlphQ9D945 130 aaKnown RBP18.18■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Pdzd9Q9D9M4 266 aa18.18■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Zfp51Q3U4L8 781 aa18.17■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Foxp4Q9DBY0 795 aaKnown RBP18.17■□□□□ 0.5
Clstn1-201ENSMUST00000039144 St18Q80TY4 1045 aa18.17■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Ccar2Q8VDP4 922 aaKnown RBP18.17■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Phkg2Q9DB30 406 aa18.17■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Ccdc173A0JLY1 547 aa18.16■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Prim1P20664 417 aa18.16■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Bms1Q6PGF5 1284 aaKnown RBP18.16■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Cavin2Q63918 418 aaKnown RBP18.16■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Phf23Q8BSN5 401 aa18.16■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Glipr1l2Q9CQ35 332 aa18.15■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Ppfia3P60469 1194 aa18.15■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Jakmip1Q8BVL9 626 aa18.15■□□□□ 0.5
Clstn1-201ENSMUST00000039144 Mmel1Q9JLI3 765 aa18.15■□□□□ 0.5
Clstn1-201ENSMUST00000039144 FosbP13346 338 aa18.14■□□□□ 0.49
Clstn1-201ENSMUST00000039144 CebpzP53569 1052 aaKnown RBP18.14■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Ggnbp2Q5SV77 696 aa18.14■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Kcnh4A2A5F7 1018 aa18.14■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Stac3Q8BZ71 360 aa18.14■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Zfp804bA0A0G2JGH6 1343 aa18.14■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Brpf3B2KF05 1204 aaKnown RBP18.13■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Slx4ipQ9D7Y9 413 aa18.13■□□□□ 0.49
Clstn1-201ENSMUST00000039144 CrebrfQ8CDG5 640 aaKnown RBP18.13■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Chl1P70232 1209 aa18.13■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Pdzrn3Q69ZS0 1063 aa18.13■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Stk3Q9JI10 497 aa18.13■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Sema6bO54951 886 aa18.12■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Ptpdc1Q6NZK8 747 aa18.12■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Sass6Q80UK7 654 aa18.12■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Fam50bQ9WTJ8 334 aa18.12■□□□□ 0.49
Clstn1-201ENSMUST00000039144 Rnf123Q5XPI3 1314 aa18.12■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms