RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Cfap73J3QPZ5 306 aa15.55■□□□□ 0.08
Notch1-201ENSMUST00000028288 Slc12a5Q91V14 1138 aa15.55■□□□□ 0.08
Notch1-201ENSMUST00000028288 Rnf41Q8BH75 317 aa15.55■□□□□ 0.08
Notch1-201ENSMUST00000028288 4921504E06RikQ8CET2 560 aa15.55■□□□□ 0.08
Notch1-201ENSMUST00000028288 Zbtb21E9Q444 1094 aa15.55■□□□□ 0.08
Notch1-201ENSMUST00000028288 Nucb2P81117 420 aa15.55■□□□□ 0.08
Notch1-201ENSMUST00000028288 Ccdc155Q80VJ8 648 aa15.55■□□□□ 0.08
Notch1-201ENSMUST00000028288 Nop53Q8BK35 484 aaKnown RBP15.55■□□□□ 0.08
Notch1-201ENSMUST00000028288 Cdca7Q9D0M2 382 aa15.55■□□□□ 0.08
Notch1-201ENSMUST00000028288 Slc7a3P70423 618 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Olr1Q9EQ09 363 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Ktn1Q61595 1327 aaKnown RBP15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Naip7Q9JIB3 1402 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Naip6Q9JIB6 1403 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Mcm10Q0VBD2 885 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Ccdc12Q8R344 166 aaKnown RBP15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Cetn2Q9R1K9 172 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Ppfia3P60469 1194 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Klhdc4Q921I2 584 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Cfap53Q9D439 514 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Api5O35841 504 aaKnown RBP15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Srgap1Q91Z69 1062 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Samd9lQ69Z37 1561 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Krt23Q99PS0 422 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Zhx1P70121 873 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Homer1Q9Z2Y3 366 aa15.54■□□□□ 0.08
Notch1-201ENSMUST00000028288 Metap2O08663 478 aaKnown RBP15.53■□□□□ 0.08
Notch1-201ENSMUST00000028288 Mast1Q9R1L5 1570 aa15.53■□□□□ 0.08
Notch1-201ENSMUST00000028288 Sil1Q9EPK6 465 aa15.53■□□□□ 0.08
Notch1-201ENSMUST00000028288 Ano10Q8BH79 659 aa15.53■□□□□ 0.08
Notch1-201ENSMUST00000028288 Gpatch8A2A6A1 1505 aa15.53■□□□□ 0.08
Notch1-201ENSMUST00000028288 Ampd3O08739 766 aa15.53■□□□□ 0.08
Notch1-201ENSMUST00000028288 Vps18Q8R307 973 aa15.53■□□□□ 0.08
Notch1-201ENSMUST00000028288 Rrbp1Q99PL5 1605 aaKnown RBP15.53■□□□□ 0.08
Notch1-201ENSMUST00000028288 Duxf3A0A0N4SV92 674 aa15.52■□□□□ 0.08
Notch1-201ENSMUST00000028288 Baiap2l1Q9DBJ3 514 aa15.52■□□□□ 0.08
Notch1-201ENSMUST00000028288 Chd1lQ9CXF7 900 aa15.52■□□□□ 0.08
Notch1-201ENSMUST00000028288 Nphp3Q7TNH6 1325 aa15.52■□□□□ 0.08
Notch1-201ENSMUST00000028288 Hand2Q61039 217 aa15.52■□□□□ 0.08
Notch1-201ENSMUST00000028288 Kdm5bQ80Y84 1544 aa15.52■□□□□ 0.08
Notch1-201ENSMUST00000028288 Fancd2Q80V62 1450 aa15.52■□□□□ 0.07
Notch1-201ENSMUST00000028288 Naa15Q80UM3 865 aaKnown RBP15.52■□□□□ 0.07
Notch1-201ENSMUST00000028288 Ercc3P49135 783 aa15.52■□□□□ 0.07
Notch1-201ENSMUST00000028288 RalylQ8BTF8 293 aa15.52■□□□□ 0.07
Notch1-201ENSMUST00000028288 Calml4Q91WQ9 153 aa15.52■□□□□ 0.07
Notch1-201ENSMUST00000028288 Lman1Q9D0F3 517 aa15.52■□□□□ 0.07
Notch1-201ENSMUST00000028288 Smarcc1P97496 1104 aa15.52■□□□□ 0.07
Notch1-201ENSMUST00000028288 Chpf2Q3UU43 768 aa15.52■□□□□ 0.07
Notch1-201ENSMUST00000028288 LlphQ9D945 130 aaKnown RBP15.52■□□□□ 0.07
Notch1-201ENSMUST00000028288 Zbtb3Q91X45 518 aa15.51■□□□□ 0.07
Notch1-201ENSMUST00000028288 Liat1Q810M6 228 aa15.51■□□□□ 0.07
Notch1-201ENSMUST00000028288 Smc1aQ9CU62 1233 aaKnown RBP15.51■□□□□ 0.07
Notch1-201ENSMUST00000028288 InsrP15208 1372 aa15.51■□□□□ 0.07
Notch1-201ENSMUST00000028288 Dapk3O54784 448 aa15.51■□□□□ 0.07
Notch1-201ENSMUST00000028288 Gng11P61953 73 aa15.51■□□□□ 0.07
Notch1-201ENSMUST00000028288 Atp7aQ64430 1491 aa15.51■□□□□ 0.07
Notch1-201ENSMUST00000028288 Traf3ip1Q149C2 625 aa15.51■□□□□ 0.07
Notch1-201ENSMUST00000028288 Tbc1d2bQ3U0J8 965 aa15.51■□□□□ 0.07
Notch1-201ENSMUST00000028288 Cdan1Q8CC12 1239 aa15.51■□□□□ 0.07
Notch1-201ENSMUST00000028288 Kdm3aQ6PCM1 1323 aa15.5■□□□□ 0.07
Notch1-201ENSMUST00000028288 Nkx1-2P42580 305 aa15.5■□□□□ 0.07
Notch1-201ENSMUST00000028288 Znf287Q9EQB9 759 aa15.5■□□□□ 0.07
Notch1-201ENSMUST00000028288 Gjc1P28229 396 aa15.5■□□□□ 0.07
Notch1-201ENSMUST00000028288 GphnQ8BUV3 769 aaKnown RBP15.5■□□□□ 0.07
Notch1-201ENSMUST00000028288 Vps37cQ8R105 352 aa15.5■□□□□ 0.07
Notch1-201ENSMUST00000028288 Lrriq1Q0P5X1 1673 aa15.5■□□□□ 0.07
Notch1-201ENSMUST00000028288 Gm10563F6WIE4 79 aa15.5■□□□□ 0.07
Notch1-201ENSMUST00000028288 GmnnO88513 206 aa15.5■□□□□ 0.07
Notch1-201ENSMUST00000028288 Fam107bQ3TGF2 131 aa15.5■□□□□ 0.07
Notch1-201ENSMUST00000028288 Stat1P42225 749 aa15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Gnat3Q3V3I2 354 aa15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Cul5Q9D5V5 780 aa15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Kdm5cP41230 1554 aa15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Vps16Q920Q4 839 aa15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Cdk13Q69ZA1 1511 aaKnown RBP15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Nap1l2P51860 460 aa15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Ddx46Q569Z5 1032 aaKnown RBP15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Brd3Q8K2F0 726 aaKnown RBP15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Syt10Q9R0N4 523 aa15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Smco2Q9DA21 347 aa15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Hdhd2Q3UGR5 259 aa15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Cdca8Q8BHX3 289 aa15.49■□□□□ 0.07
Notch1-201ENSMUST00000028288 Klhl10Q9D5V2 608 aa15.48■□□□□ 0.07
Notch1-201ENSMUST00000028288 Lrrc9Q8CDN9 1456 aa15.48■□□□□ 0.07
Notch1-201ENSMUST00000028288 Cyp7a1Q64505 503 aa15.48■□□□□ 0.07
Notch1-201ENSMUST00000028288 Snx13Q6PHS6 957 aa15.48■□□□□ 0.07
Notch1-201ENSMUST00000028288 Ppfia1B2RXQ2 1266 aa15.48■□□□□ 0.07
Notch1-201ENSMUST00000028288 Klc3Q91W40 508 aa15.48■□□□□ 0.07
Notch1-201ENSMUST00000028288 Ppip5k1A2ARP1 1436 aa15.48■□□□□ 0.07
Notch1-201ENSMUST00000028288 Cwc25Q9DBF7 416 aa15.48■□□□□ 0.07
Notch1-201ENSMUST00000028288 Nf2P46662 596 aa15.47■□□□□ 0.07
Notch1-201ENSMUST00000028288 Mex3cQ05A36 652 aaKnown RBP15.47■□□□□ 0.07
Notch1-201ENSMUST00000028288 Trim27Q62158 513 aa15.47■□□□□ 0.07
Notch1-201ENSMUST00000028288 Fam135bQ9DAI6 1403 aa15.47■□□□□ 0.07
Notch1-201ENSMUST00000028288 Mug2P28666 1451 aa15.47■□□□□ 0.07
Notch1-201ENSMUST00000028288 Myd88P22366 296 aa15.47■□□□□ 0.07
Notch1-201ENSMUST00000028288 Cfap157Q0VFX2 523 aa15.47■□□□□ 0.07
Notch1-201ENSMUST00000028288 Nol11Q8BJW5 723 aaKnown RBP15.47■□□□□ 0.07
Notch1-201ENSMUST00000028288 Iffo1Q8BXL9 562 aa15.47■□□□□ 0.07
Notch1-201ENSMUST00000028288 Hs2st1Q8R3H7 356 aa15.47■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms