RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 SctQ08535 133 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Yy2Q3TTC2 378 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Q3U4G0 281 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Nr1h4Q60641 488 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Szrd1Q6NXN1 152 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Znf728Q6P5C7 752 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Otub1Q7TQI3 271 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cstf2tQ8C7E9 632 aaKnown RBP14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Tp53bp2Q8CG79 1128 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gramd1cQ8CI52 457 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Fmo2Q8K2I3 535 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 GatbQ99JT1 557 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Wdr89Q9D0R9 386 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Hmgn3Q9DCB1 99 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 FastkQ9JIX9 511 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 A0A286YCH8 300 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 3110040M04RikA0A286YDK0 300 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 A0A286YE43 300 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 AU018091E9PWS4 684 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Vmn1r177E9PXM3 309 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gm7945F6QI24 236 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ccdc188F6WEU2 249 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 1700014D04RikJ3QMS2 983 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gm6337K7N6X9 211 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gm3115L7N285 211 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Psmb10O35955 273 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Zfp59P16373 634 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 FurinP23188 793 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Epb41P48193 858 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 VldlrP98156 873 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Tmem217Q14AF1 189 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Alg10bQ3UGP8 474 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Nkx6-3Q3UHX8 262 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Fcho2Q3UQN2 809 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Nxf3Q4ZGD9 553 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Xrcc1Q60596 631 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Krt72Q6IME9 520 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Mapre3Q6PER3 281 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Fads6Q80UG1 342 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Rtp2Q80ZI2 223 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Zfand1Q8BFR6 268 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Atg4bQ8BGE6 393 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Map4k5Q8BPM2 847 aaKnown RBP14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Pramef8Q8CE24 480 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Il23rQ8K4B4 644 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Snx11Q91WL6 271 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 TympQ99N42 471 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Art4Q9CRA0 300 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cep97Q9CZ62 856 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 NvlQ9DBY8 855 aaKnown RBP14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Stk25Q9Z2W1 426 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ankle1A8VU90 534 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gabrr3B2RXA8 464 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gm609E9Q573 300 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Klk1P15947 261 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Elk4P41158 430 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 AcadmP45952 421 aaKnown RBP14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 MybphP70402 483 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Dlk1Q09163 385 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Acss3Q14DH7 682 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Tmed1Q3V009 227 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 C1orf109Q499E6 217 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 C2cd4cC2CD4Q5HZI2 419 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Brinp2Q6DFY8 783 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Tvp23aQ6NVH0 222 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Slc39a9Q8BFU1 308 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Sdhaf3Q8BQU3 125 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 E330021D16RikQ8BW45 371 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 ExogQ8C163 368 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Abhd18Q8C1A9 464 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Colec12Q8K4Q8 742 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Slc8b1Q925Q3 585 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cntd1Q9D995 334 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 CalyQ9DCA7 226 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Spin2gA0A0N4SW15 236 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gm17067E9Q6S4 354 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Spin2eJ3QNQ0 234 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 P01654 111 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 P01656 111 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 P03977 111 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Krt1P04104 637 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 PlauP06869 433 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Rpl3P27659 403 aaKnown RBP14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 InhbcP55104 352 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Tas2r7P59530 312 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gbx1P82976 418 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Serpina3mQ03734 418 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gpr39Q5U431 456 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Olfr128Q7TRJ1 308 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Znf423Q80TS5 1292 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 StgQ8BM15 349 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cdh7Q8BM92 785 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Slc5a8Q8BYF6 611 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Rdh12Q8BYK4 316 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Yipf4Q8C407 246 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Zfpm2Q8CCH7 1151 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Irak2Q8CFA1 622 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Olfr1033Q8VFK5 310 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cdc42ep1Q91W92 409 aa14.04□□□□□ -0.16
Nup88-202ENSMUST00000108530 Pgm3Q9CYR6 542 aa14.04□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 76.6 ms