Protein–RNA interactions for Protein: Q8C407

Yipf4, Protein YIPF4, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yipf4Q8C407 Gm25239-201ENSMUST00000174915 86 ntBASIC37.15■■■■□ 3.54
Yipf4Q8C407 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Yipf4Q8C407 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Yipf4Q8C407 Gm15042-201ENSMUST00000120212 883 ntBASIC32.43■■■□□ 2.78
Yipf4Q8C407 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Yipf4Q8C407 Gm24109-201ENSMUST00000175489 103 ntBASIC32.2■■■□□ 2.75
Yipf4Q8C407 Gm15045-201ENSMUST00000117359 883 ntBASIC31.65■■■□□ 2.66
Yipf4Q8C407 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Yipf4Q8C407 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Yipf4Q8C407 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Yipf4Q8C407 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
Yipf4Q8C407 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Yipf4Q8C407 Gm23366-201ENSMUST00000175022 89 ntBASIC31.05■■■□□ 2.56
Yipf4Q8C407 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Yipf4Q8C407 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Yipf4Q8C407 Psd-208ENSMUST00000224556 2034 ntBASIC30.14■■■□□ 2.42
Yipf4Q8C407 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Yipf4Q8C407 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.06■■■□□ 2.4
Yipf4Q8C407 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
Yipf4Q8C407 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Yipf4Q8C407 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.83■■■□□ 2.37
Yipf4Q8C407 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.79■■■□□ 2.36
Yipf4Q8C407 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.78■■■□□ 2.36
Yipf4Q8C407 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Yipf4Q8C407 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Yipf4Q8C407 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Yipf4Q8C407 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Yipf4Q8C407 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Yipf4Q8C407 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Yipf4Q8C407 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Yipf4Q8C407 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
Yipf4Q8C407 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.37■■■□□ 2.29
Yipf4Q8C407 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Yipf4Q8C407 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Yipf4Q8C407 Gm25238-201ENSMUST00000174914 89 ntBASIC29.31■■■□□ 2.28
Yipf4Q8C407 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.18■■■□□ 2.26
Yipf4Q8C407 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Yipf4Q8C407 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Yipf4Q8C407 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Yipf4Q8C407 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Yipf4Q8C407 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Yipf4Q8C407 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
Yipf4Q8C407 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Yipf4Q8C407 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.64■■■□□ 2.18
Yipf4Q8C407 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.6■■■□□ 2.17
Yipf4Q8C407 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Yipf4Q8C407 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Yipf4Q8C407 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.42■■■□□ 2.14
Yipf4Q8C407 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Yipf4Q8C407 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Yipf4Q8C407 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.13
Yipf4Q8C407 Gm27325-201ENSMUST00000175467 74 ntBASIC28.38■■■□□ 2.13
Yipf4Q8C407 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Yipf4Q8C407 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.28■■■□□ 2.12
Yipf4Q8C407 Gm25262-201ENSMUST00000174934 133 ntBASIC28.17■■■□□ 2.1
Yipf4Q8C407 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Yipf4Q8C407 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.13■■■□□ 2.09
Yipf4Q8C407 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Yipf4Q8C407 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Yipf4Q8C407 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Yipf4Q8C407 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Yipf4Q8C407 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.96■■■□□ 2.07
Yipf4Q8C407 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Yipf4Q8C407 Rab21-202ENSMUST00000218831 843 ntBASIC27.93■■■□□ 2.06
Yipf4Q8C407 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.89■■■□□ 2.05
Yipf4Q8C407 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.86■■■□□ 2.05
Yipf4Q8C407 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Yipf4Q8C407 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Yipf4Q8C407 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Yipf4Q8C407 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.68■■■□□ 2.02
Yipf4Q8C407 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.68■■■□□ 2.02
Yipf4Q8C407 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Yipf4Q8C407 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.64■■■□□ 2.02
Yipf4Q8C407 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.62■■■□□ 2.01
Yipf4Q8C407 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.57■■■□□ 2
Yipf4Q8C407 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.57■■■□□ 2
Yipf4Q8C407 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
Yipf4Q8C407 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.54■■■□□ 2
Yipf4Q8C407 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Yipf4Q8C407 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.53■■■□□ 2
Yipf4Q8C407 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.52■■■□□ 2
Yipf4Q8C407 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.49■■□□□ 1.99
Yipf4Q8C407 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Yipf4Q8C407 Gm26115-201ENSMUST00000175605 87 ntBASIC27.48■■□□□ 1.99
Yipf4Q8C407 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
Yipf4Q8C407 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Yipf4Q8C407 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Yipf4Q8C407 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Yipf4Q8C407 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Yipf4Q8C407 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Yipf4Q8C407 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Yipf4Q8C407 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Yipf4Q8C407 Gm8109-201ENSMUST00000194076 746 ntBASIC27.31■■□□□ 1.96
Yipf4Q8C407 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Yipf4Q8C407 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Yipf4Q8C407 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Yipf4Q8C407 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.23■■□□□ 1.95
Yipf4Q8C407 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Yipf4Q8C407 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.21■■□□□ 1.95
Yipf4Q8C407 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.18■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms