Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm25239-201ENSMUST00000174915 86 ntBASIC42.62■■■■■ 4.41
Ccdc188F6WEU2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.89■■■■□ 3.98
Ccdc188F6WEU2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
Ccdc188F6WEU2 Gm24109-201ENSMUST00000175489 103 ntBASIC37.48■■■■□ 3.59
Ccdc188F6WEU2 Gm15042-201ENSMUST00000120212 883 ntBASIC36.28■■■■□ 3.4
Ccdc188F6WEU2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.02■■■■□ 3.36
Ccdc188F6WEU2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.01■■■■□ 3.36
Ccdc188F6WEU2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Ccdc188F6WEU2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Ccdc188F6WEU2 Gm23366-201ENSMUST00000175022 89 ntBASIC35.4■■■■□ 3.26
Ccdc188F6WEU2 Gm15045-201ENSMUST00000117359 883 ntBASIC35.36■■■■□ 3.25
Ccdc188F6WEU2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.29■■■■□ 3.24
Ccdc188F6WEU2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Ccdc188F6WEU2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Ccdc188F6WEU2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.96■■■■□ 3.19
Ccdc188F6WEU2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.82■■■■□ 3.16
Ccdc188F6WEU2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Ccdc188F6WEU2 Gm25238-201ENSMUST00000174914 89 ntBASIC33.97■■■■□ 3.03
Ccdc188F6WEU2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.95■■■■□ 3.03
Ccdc188F6WEU2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Ccdc188F6WEU2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Ccdc188F6WEU2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.65■■■□□ 2.98
Ccdc188F6WEU2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Ccdc188F6WEU2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.11■■■□□ 2.89
Ccdc188F6WEU2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
Ccdc188F6WEU2 Gm25262-201ENSMUST00000174934 133 ntBASIC32.92■■■□□ 2.86
Ccdc188F6WEU2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.82■■■□□ 2.84
Ccdc188F6WEU2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.57■■■□□ 2.8
Ccdc188F6WEU2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.51■■■□□ 2.79
Ccdc188F6WEU2 Gm26115-201ENSMUST00000175605 87 ntBASIC32.5■■■□□ 2.79
Ccdc188F6WEU2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.45■■■□□ 2.79
Ccdc188F6WEU2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.42■■■□□ 2.78
Ccdc188F6WEU2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
Ccdc188F6WEU2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ccdc188F6WEU2 Gm8109-201ENSMUST00000194076 746 ntBASIC32.29■■■□□ 2.76
Ccdc188F6WEU2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Ccdc188F6WEU2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.12■■■□□ 2.73
Ccdc188F6WEU2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Ccdc188F6WEU2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc188F6WEU2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc188F6WEU2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ccdc188F6WEU2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ccdc188F6WEU2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Ccdc188F6WEU2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.69■■■□□ 2.66
Ccdc188F6WEU2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.65■■■□□ 2.66
Ccdc188F6WEU2 Rab21-202ENSMUST00000218831 843 ntBASIC31.64■■■□□ 2.66
Ccdc188F6WEU2 Gm27325-201ENSMUST00000175467 74 ntBASIC31.61■■■□□ 2.65
Ccdc188F6WEU2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ccdc188F6WEU2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.65
Ccdc188F6WEU2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Ccdc188F6WEU2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Ccdc188F6WEU2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.46■■■□□ 2.63
Ccdc188F6WEU2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ccdc188F6WEU2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.38■■■□□ 2.61
Ccdc188F6WEU2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.26■■■□□ 2.59
Ccdc188F6WEU2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
Ccdc188F6WEU2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Ccdc188F6WEU2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ccdc188F6WEU2 Gm24804-201ENSMUST00000174982 85 ntBASIC31.09■■■□□ 2.57
Ccdc188F6WEU2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.06■■■□□ 2.56
Ccdc188F6WEU2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ccdc188F6WEU2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ccdc188F6WEU2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ccdc188F6WEU2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc188F6WEU2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Ccdc188F6WEU2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ccdc188F6WEU2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ccdc188F6WEU2 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.81■■■□□ 2.52
Ccdc188F6WEU2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.72■■■□□ 2.51
Ccdc188F6WEU2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ccdc188F6WEU2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ccdc188F6WEU2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.64■■■□□ 2.5
Ccdc188F6WEU2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc188F6WEU2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.6■■■□□ 2.49
Ccdc188F6WEU2 Zfp131-205ENSMUST00000223812 663 ntBASIC30.59■■■□□ 2.49
Ccdc188F6WEU2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccdc188F6WEU2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccdc188F6WEU2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.53■■■□□ 2.48
Ccdc188F6WEU2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc188F6WEU2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
Ccdc188F6WEU2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.45■■■□□ 2.47
Ccdc188F6WEU2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ccdc188F6WEU2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc188F6WEU2 Gm27322-201ENSMUST00000184007 104 ntBASIC30.38■■■□□ 2.45
Ccdc188F6WEU2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc188F6WEU2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ccdc188F6WEU2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.32■■■□□ 2.44
Ccdc188F6WEU2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Ccdc188F6WEU2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
Ccdc188F6WEU2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc188F6WEU2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.13■■■□□ 2.41
Ccdc188F6WEU2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.12■■■□□ 2.41
Ccdc188F6WEU2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc188F6WEU2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc188F6WEU2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ccdc188F6WEU2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc188F6WEU2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc188F6WEU2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.07■■■□□ 2.4
Ccdc188F6WEU2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.07■■■□□ 2.4
Ccdc188F6WEU2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.02■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms