RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SAP30O75446 220 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 KHDRBS3O75525 346 aaKnown RBP4.79□□□□□ -1.64
SSR3-208ENST00000496050 CEACAM1P13688 526 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 SRD5A2P31213 254 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 OR3A2P47893 321 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 SMSP52788 366 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 LCP2Q13094 533 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 SRSF9Q13242 221 aaKnown RBP eCLIP4.79□□□□□ -1.64
SSR3-208ENST00000496050 ITGA9Q13797 1035 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 PDE7AQ13946 482 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 TMEM132DQ14C87 1099 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 C5orf24Q7Z6I8 188 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 RABEPKQ7Z6M1 372 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 ZSCAN30Q86W11 494 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 HOGA1Q86XE5 327 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 LACC1Q8IV20 430 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 APLFQ8IW19 511 aaPredicted RBP4.79□□□□□ -1.64
SSR3-208ENST00000496050 RAB42Q8N4Z0 105 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 SMYD1Q8NB12 490 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 CLEC1AQ8NC01 280 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 MRGPRDQ8TDS7 321 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 ZNRF4Q8WWF5 429 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 FBXO17Q96EF6 278 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 EPSTI1Q96J88 318 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 NAP1L3Q99457 506 aaPredicted RBP4.79□□□□□ -1.64
SSR3-208ENST00000496050 TDRD1Q9BXT4 1180 aaKnown RBP4.79□□□□□ -1.64
SSR3-208ENST00000496050 TSPYL1Q9H0U9 437 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 ZNF71Q9NQZ8 489 aaPredicted RBP4.79□□□□□ -1.64
SSR3-208ENST00000496050 C2orf42Q9NWW7 574 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 POMT2Q9UKY4 750 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 SATB2Q9UPW6 733 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 WDR37Q9Y2I8 494 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 TMED7Q9Y3B3 224 aa4.79□□□□□ -1.64
SSR3-208ENST00000496050 TMEM129A0AVI4 362 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 C5orf51A6NDU8 294 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 NKX6-3A6NJ46 265 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 ZNF732B4DXR9 585 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 GSTA2P09210 222 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 SLC1A3P43003 542 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 OR1D5P58170 312 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 GFPT1Q06210 699 aaPredicted RBP4.78□□□□□ -1.64
SSR3-208ENST00000496050 CDH18Q13634 790 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 GRB14Q14449 540 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 CCDC92Q53HC0 331 aaPredicted RBP4.78□□□□□ -1.64
SSR3-208ENST00000496050 TCEAL6Q6IPX3 200 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 RAB12Q6IQ22 244 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 TATDN1Q6P1N9 297 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 CD164L2Q6UWJ8 174 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 RFPL4BQ6ZWI9 263 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 BTN2A1Q7KYR7 527 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 TRMT11Q7Z4G4 463 aaKnown RBP4.78□□□□□ -1.64
SSR3-208ENST00000496050 PTAR1Q7Z6K3 402 aaPredicted RBP4.78□□□□□ -1.64
SSR3-208ENST00000496050 SERPINA12Q8IW75 414 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 DDHD1Q8NEL9 900 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 OR5T2Q8NGG2 359 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 MAPK15Q8TD08 544 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 SAP25Q8TEE9 199 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 GATAD1Q8WUU5 269 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 FAM46BQ96A09 425 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 GUCD1Q96NT3 240 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 PGLYRP2Q96PD5 576 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 NEDD4LQ96PU5 975 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 FAM213AQ9BRX8 229 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 LRRC2Q9BYS8 371 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 MTIF3Q9H2K0 278 aaKnown RBP4.78□□□□□ -1.64
SSR3-208ENST00000496050 ZDHHC6Q9H6R6 413 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 VIPAS39Q9H9C1 493 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 IL19Q9UHD0 177 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 FOXA2Q9Y261 457 aaPredicted RBP4.78□□□□□ -1.64
SSR3-208ENST00000496050 MYH14Q7Z406 1995 aaKnown RBP4.78□□□□□ -1.64
SSR3-208ENST00000496050 DHX29Q7Z478 1369 aaKnown RBP4.78□□□□□ -1.64
SSR3-208ENST00000496050 DISP3Q9P2K9 1392 aa4.78□□□□□ -1.64
SSR3-208ENST00000496050 CCDC162PA2VCL2 907 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 SLC1A7O00341 560 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 IKBKBO14920 756 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 UMODP07911 640 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 CTNNA2P26232 953 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 SOX3P41225 446 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 LEPRP48357 1165 aaKnown RBP4.77□□□□□ -1.65
SSR3-208ENST00000496050 PAX9P55771 341 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 TSTA3Q13630 321 aaPredicted RBP4.77□□□□□ -1.65
SSR3-208ENST00000496050 EFTUD2Q15029 972 aaKnown RBP eCLIP4.77□□□□□ -1.654e-8■□□□□ 9.1
SSR3-208ENST00000496050 ZNF876PQ49A33 203 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 LRRC37A5PQ49AS3 106 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 CHMP1BQ7LBR1 199 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 ZNF410Q86VK4 478 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 OR6S1Q8NH40 331 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 GANCQ8TET4 914 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 CASP10Q92851 521 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 OMA1Q96E52 524 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 ZNF560Q96MR9 790 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 DDX50Q9BQ39 737 aaKnown RBP4.77□□□□□ -1.65
SSR3-208ENST00000496050 PIGQQ9BRB3 760 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 UBAC1Q9BSL1 405 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 TRIM7Q9C029 511 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 TNMDQ9H2S6 317 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 ZCCHC3Q9NUD5 404 aaKnown RBP4.77□□□□□ -1.65
SSR3-208ENST00000496050 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.77□□□□□ -1.65
SSR3-208ENST00000496050 ANO10Q9NW15 660 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms