RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR50, Length 90 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR50	snR50	POA1	P38218	177 aa		0.84	□□□□□ -2.27
snR50	snR50	CDC55	Q00362	526 aa		0.84	□□□□□ -2.27
snR50	snR50	RNT1	Q02555	471 aa		0.84	□□□□□ -2.27
snR50	snR50	YPL068C	Q02749	293 aa		0.84	□□□□□ -2.27
snR50	snR50	RIM13	Q03792	727 aa		0.84	□□□□□ -2.27
snR50	snR50	SVS1	Q12254	260 aa		0.84	□□□□□ -2.27
snR50	snR50	HCA4	P20448	770 aa	Known RBP	0.83	□□□□□ -2.28
snR50	snR50	AFG2	P32794	780 aa		0.83	□□□□□ -2.28
snR50	snR50	RRT14	P40470	206 aa		0.83	□□□□□ -2.28
snR50	snR50	URM1	P40554	99 aa	Predicted RBP	0.83	□□□□□ -2.28
snR50	snR50	MNL2	Q12205	849 aa		0.83	□□□□□ -2.28
snR50	snR50	MET6	P05694	767 aa	Known RBP	0.82	□□□□□ -2.28
snR50	snR50	ALG7	P07286	448 aa		0.82	□□□□□ -2.28
snR50	snR50	ACE2	P21192	770 aa		0.82	□□□□□ -2.28
snR50	snR50	KAR4	P25583	335 aa		0.82	□□□□□ -2.28
snR50	snR50	YHL017W	P38745	532 aa		0.82	□□□□□ -2.28
snR50	snR50	LTP1	P40347	161 aa		0.82	□□□□□ -2.28
snR50	snR50	YIL166C	P40445	542 aa		0.82	□□□□□ -2.28
snR50	snR50	DAK2	P43550	591 aa		0.82	□□□□□ -2.28
snR50	snR50	DAS1	P47005	663 aa		0.82	□□□□□ -2.28
snR50	snR50	NCS6	P53088	359 aa		0.82	□□□□□ -2.28
snR50	snR50	YCS4	Q06156	1176 aa		0.82	□□□□□ -2.28
snR50	snR50	PTC5	Q12511	572 aa		0.82	□□□□□ -2.28
snR50	snR50	TAF13	P11747	167 aa		0.81	□□□□□ -2.28
snR50	snR50	ATG19	P35193	415 aa		0.81	□□□□□ -2.28
snR50	snR50	BOL3	P39724	118 aa		0.81	□□□□□ -2.28
snR50	snR50	YFL054C	P43549	646 aa		0.81	□□□□□ -2.28
snR50	snR50	ACF4	P47129	309 aa		0.81	□□□□□ -2.28
snR50	snR50	ENT3	P47160	408 aa		0.81	□□□□□ -2.28
snR50	snR50	MON1	P53129	644 aa		0.81	□□□□□ -2.28
snR50	snR50	YNR063W	P53749	607 aa		0.81	□□□□□ -2.28
snR50	snR50	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	0.81	□□□□□ -2.28	not detected
snR50	snR50	TRS120	Q04183	1289 aa		0.81	□□□□□ -2.28
snR50	snR50	INP54	Q08227	384 aa	Known RBP	0.81	□□□□□ -2.28
snR50	snR50	NPC2	Q12408	173 aa		0.81	□□□□□ -2.28
snR50	snR50	THS1	P04801	734 aa	Known RBP	0.8	□□□□□ -2.28
snR50	snR50	SEC23	P15303	768 aa	Known RBP	0.8	□□□□□ -2.28
snR50	snR50	KAR2	P16474	682 aa	Known RBP	0.8	□□□□□ -2.28
snR50	snR50	CDC43	P18898	376 aa		0.8	□□□□□ -2.28
snR50	snR50	ORC2	P32833	620 aa		0.8	□□□□□ -2.28
snR50	snR50	ALG3	P38179	458 aa		0.8	□□□□□ -2.28
snR50	snR50	PEX28	P38848	579 aa		0.8	□□□□□ -2.28
snR50	snR50	YAP1801	P38856	637 aa		0.8	□□□□□ -2.28
snR50	snR50	ZRG8	P40021	1076 aa		0.8	□□□□□ -2.28
snR50	snR50	YGL140C	P53120	1219 aa		0.8	□□□□□ -2.28
snR50	snR50	ERG5	P54781	538 aa		0.8	□□□□□ -2.28
snR50	snR50	SEG1	Q04279	960 aa		0.8	□□□□□ -2.28
snR50	snR50	EST2	Q06163	884 aa		0.8	□□□□□ -2.28
snR50	snR50	SPE1	P08432	466 aa		0.79	□□□□□ -2.28
snR50	snR50	GEF1	P37020	779 aa		0.79	□□□□□ -2.28
snR50	snR50	RGD1	P38339	666 aa		0.79	□□□□□ -2.28
snR50	snR50	SAM37	P50110	327 aa		0.79	□□□□□ -2.28
snR50	snR50	PEX13	P80667	386 aa		0.79	□□□□□ -2.28
snR50	snR50	APM1	Q00776	475 aa	Predicted RBP	0.79	□□□□□ -2.28
snR50	snR50	NOC3	Q07896	663 aa	Predicted RBP	0.79	□□□□□ -2.28
snR50	snR50	HEM13	P11353	328 aa	Known RBP	0.78	□□□□□ -2.28
snR50	snR50	CPS1	P27614	576 aa		0.78	□□□□□ -2.28
snR50	snR50	SQT1	P35184	431 aa		0.78	□□□□□ -2.28
snR50	snR50	PPS1	P38148	807 aa		0.78	□□□□□ -2.28
snR50	snR50	CIC1	P38779	376 aa	Known RBP	0.78	□□□□□ -2.28
snR50	snR50	GEM1	P39722	662 aa		0.78	□□□□□ -2.28
snR50	snR50	QDR1	P40475	563 aa		0.78	□□□□□ -2.28
snR50	snR50	NET1	P47035	1189 aa		0.78	□□□□□ -2.28
snR50	snR50	RSM26	P47141	266 aa		0.78	□□□□□ -2.28
snR50	snR50	PSP2	P50109	593 aa	Known RBP	0.78	□□□□□ -2.28
snR50	snR50	HFM1	P51979	1187 aa		0.78	□□□□□ -2.28
snR50	snR50	ATG1	P53104	897 aa		0.78	□□□□□ -2.28
snR50	snR50	YGR012W	P53206	393 aa		0.78	□□□□□ -2.28
snR50	snR50	ADY4	Q05955	493 aa		0.78	□□□□□ -2.28
snR50	snR50	CDA1	Q06702	301 aa		0.78	□□□□□ -2.28
snR50	snR50	YER152C	P10356	443 aa		0.77	□□□□□ -2.29
snR50	snR50	HSF1	P10961	833 aa		0.77	□□□□□ -2.29
snR50	snR50	ENA1	P13587	1091 aa		0.77	□□□□□ -2.29
snR50	snR50	PTP1	P25044	335 aa		0.77	□□□□□ -2.29
snR50	snR50	DMC1	P25453	334 aa		0.77	□□□□□ -2.29
snR50	snR50	PRP40	P33203	583 aa	Known RBP	0.77	□□□□□ -2.29
snR50	snR50	GLO3	P38682	493 aa	Known RBP	0.77	□□□□□ -2.29
snR50	snR50	HRB1	P38922	454 aa	Known RBP RIP-Chip data	0.77	□□□□□ -2.29	not detected
snR50	snR50	ENA2	Q01896	1091 aa		0.77	□□□□□ -2.29
snR50	snR50	ULP1	Q02724	621 aa		0.77	□□□□□ -2.29
snR50	snR50	ADI1	Q03677	179 aa		0.77	□□□□□ -2.29
snR50	snR50	FRE5	Q08908	694 aa		0.77	□□□□□ -2.29
snR50	snR50	ACM1	Q08981	209 aa		0.77	□□□□□ -2.29
snR50	snR50	UPC2	Q12151	913 aa		0.77	□□□□□ -2.29
snR50	snR50	ENA5	Q12691	1091 aa		0.77	□□□□□ -2.29
snR50	snR50	RPN13	O13563	156 aa		0.76	□□□□□ -2.29
snR50	snR50	BI4	P03879	638 aa		0.76	□□□□□ -2.29
snR50	snR50	BAS1	P22035	811 aa		0.76	□□□□□ -2.29
snR50	snR50	KIN3	P22209	435 aa		0.76	□□□□□ -2.29
snR50	snR50	CAD1	P24813	409 aa	Known RBP	0.76	□□□□□ -2.29
snR50	snR50	STE14	P32584	239 aa		0.76	□□□□□ -2.29
snR50	snR50	SLA2	P33338	968 aa		0.76	□□□□□ -2.29
snR50	snR50	UGA2	P38067	497 aa		0.76	□□□□□ -2.29
snR50	snR50	CCC2	P38995	1004 aa		0.76	□□□□□ -2.29
snR50	snR50	MAF1	P41910	395 aa		0.76	□□□□□ -2.29
snR50	snR50	RIA1	P53893	1110 aa		0.76	□□□□□ -2.29
snR50	snR50	YPL109C	Q02981	657 aa		0.76	□□□□□ -2.29
snR50	snR50	YML083C	Q04526	418 aa		0.76	□□□□□ -2.29
snR50	snR50	YLL058W	Q12198	575 aa		0.76	□□□□□ -2.29
snR50	snR50	MET3	P08536	511 aa		0.75	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms