RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 YNR065CP53751 1116 aa3.89□□□□□ -1.79
snR42snR42 ECM23Q02710 187 aa3.89□□□□□ -1.79
snR42snR42 HAS1Q03532 505 aaKnown RBP3.89□□□□□ -1.79
snR42snR42 CWC15Q03772 175 aaKnown RBP3.89□□□□□ -1.79
snR42snR42 YOR223WQ12015 292 aa3.89□□□□□ -1.79
snR42snR42 HKR1P41809 1802 aa3.88□□□□□ -1.79
snR42snR42 DAL5P15365 543 aa3.88□□□□□ -1.79
snR42snR42 WHI3P34761 661 aaKnown RBP3.88□□□□□ -1.79
snR42snR42 THI80P35202 319 aa3.88□□□□□ -1.79
snR42snR42 STV1P37296 890 aa3.88□□□□□ -1.79
snR42snR42 UBP12P39538 1254 aa3.88□□□□□ -1.79
snR42snR42 YIL089WP40500 205 aa3.88□□□□□ -1.79
snR42snR42 YJR008WP47085 338 aa3.88□□□□□ -1.79
snR42snR42 PRP42Q03776 544 aaKnown RBP3.88□□□□□ -1.79
snR42snR42 CSI1Q04368 295 aa3.88□□□□□ -1.79
snR42snR42 CDC45Q08032 650 aa3.88□□□□□ -1.79
snR42snR42 CBP1P07252 654 aa3.87□□□□□ -1.79
snR42snR42 HVG1P0CE11 249 aa3.87□□□□□ -1.79
snR42snR42 RPS7AP26786 190 aaKnown RBP3.87□□□□□ -1.79
snR42snR42 UBX7P38349 436 aa3.87□□□□□ -1.79
snR42snR42 SPL2P38839 148 aa3.87□□□□□ -1.79
snR42snR42 HXT8P40886 569 aa3.87□□□□□ -1.79
snR42snR42 DUS1P53759 423 aaKnown RBP3.87□□□□□ -1.79
snR42snR42 IRC4Q03036 179 aa3.87□□□□□ -1.79
snR42snR42 HDA2Q06629 674 aa3.87□□□□□ -1.79
snR42snR42 RRI2Q12348 645 aa3.87□□□□□ -1.79
snR42snR42 GPT2P36148 743 aa3.86□□□□□ -1.79
snR42snR42 PNT1P38969 423 aa3.86□□□□□ -1.79
snR42snR42 NUG1P40010 520 aaKnown RBP3.86□□□□□ -1.79
snR42snR42 RGD2P43556 714 aa3.86□□□□□ -1.79
snR42snR42 TOS4Q06266 489 aa3.86□□□□□ -1.79
snR42snR42 RVB2Q12464 471 aaKnown RBP3.86□□□□□ -1.79
snR42snR42 SAC3P46674 1301 aa3.86□□□□□ -1.79
snR42snR42 RAD2P07276 1031 aa3.85□□□□□ -1.79
snR42snR42 PRP6P19735 899 aaPredicted RBP3.85□□□□□ -1.79
snR42snR42 LCB1P25045 558 aaKnown RBP3.85□□□□□ -1.79
snR42snR42 RPT3P33298 428 aaKnown RBP3.85□□□□□ -1.79
snR42snR42 FLR1P38124 548 aa3.85□□□□□ -1.79
snR42snR42 ETP1P38748 585 aaKnown RBP3.85□□□□□ -1.79
snR42snR42 YNG2P38806 282 aaKnown RBP3.85□□□□□ -1.79
snR42snR42 OYE3P41816 400 aaPredicted RBP3.85□□□□□ -1.79
snR42snR42 ORC3P54790 616 aa3.85□□□□□ -1.79
snR42snR42 PUF6Q04373 656 aaKnown RBP3.85□□□□□ -1.79
snR42snR42 ACK1Q07622 623 aaPredicted RBP3.85□□□□□ -1.79
snR42snR42 PSF3Q12146 194 aa3.85□□□□□ -1.79
snR42snR42 GLO4Q12320 285 aa3.85□□□□□ -1.79
snR42snR42 TIF6Q12522 245 aaKnown RBP3.85□□□□□ -1.79
snR42snR42 MDL2P33311 773 aa3.84□□□□□ -1.79
snR42snR42 NTA1P40354 457 aa3.84□□□□□ -1.79
snR42snR42 YFH7P43591 353 aa3.84□□□□□ -1.79
snR42snR42 RRT6P53117 311 aaPredicted RBP3.84□□□□□ -1.79
snR42snR42 WRS1Q12109 432 aaKnown RBP3.84□□□□□ -1.79
snR42snR42 CSR2Q12734 1121 aa3.84□□□□□ -1.79
snR42snR42 FLO11P08640 1367 aa3.84□□□□□ -1.79
snR42snR42 FIG2P25653 1609 aa3.84□□□□□ -1.8
snR42snR42 RPS19AP07280 144 aaKnown RBP3.83□□□□□ -1.8
snR42snR42 RPS19BP07281 144 aaPredicted RBP3.83□□□□□ -1.8
snR42snR42 SEC18P18759 758 aaKnown RBP3.83□□□□□ -1.8
snR42snR42 ADP1P25371 1049 aa3.83□□□□□ -1.8
snR42snR42 TTI1P36097 1038 aa3.83□□□□□ -1.8
snR42snR42 SSF1P38789 453 aaPredicted RBP3.83□□□□□ -1.8
snR42snR42 FUN12P39730 1002 aaKnown RBP3.83□□□□□ -1.8
snR42snR42 YIR042CP40586 236 aa3.83□□□□□ -1.8
snR42snR42 YRB30P53107 440 aaPredicted RBP3.83□□□□□ -1.8
snR42snR42 SPO1P53541 631 aa3.83□□□□□ -1.8
snR42snR42 NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
snR42snR42 INM2Q05533 292 aa3.83□□□□□ -1.8
snR42snR42 PUN1Q06991 263 aa3.83□□□□□ -1.8
snR42snR42 YLL054CQ12244 843 aa3.83□□□□□ -1.8
snR42snR42 NCB2Q92317 146 aa3.83□□□□□ -1.8
snR42snR42 POM152P39685 1337 aa3.83□□□□□ -1.8
snR42snR42 ADR1P07248 1323 aa3.82□□□□□ -1.8
snR42snR42 PTK1P36002 662 aaPredicted RBP3.82□□□□□ -1.8
snR42snR42 YIL092WP40497 633 aa3.82□□□□□ -1.8
snR42snR42 MTC3P53077 123 aa3.82□□□□□ -1.8
snR42snR42 MSH6Q03834 1242 aa3.82□□□□□ -1.8
snR42snR42 DOT1Q04089 582 aaKnown RBP3.82□□□□□ -1.8
snR42snR42 PMA1P05030 918 aaKnown RBP3.81□□□□□ -1.8
snR42snR42 PIF1P07271 859 aa3.81□□□□□ -1.8
snR42snR42 SRS2P12954 1174 aa3.81□□□□□ -1.8
snR42snR42 APE3P37302 537 aaKnown RBP3.81□□□□□ -1.8
snR42snR42 YNL193WP53870 558 aa3.81□□□□□ -1.8
snR42snR42 RBA50Q04418 439 aa3.81□□□□□ -1.8
snR42snR42 GIN4Q12263 1142 aa3.81□□□□□ -1.8
snR42snR42 DUR1,2P32528 1835 aaKnown RBP3.81□□□□□ -1.8
snR42snR42 PFK2P16862 959 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
snR42snR42 IRS4P36115 615 aaKnown RBP3.8□□□□□ -1.8
snR42snR42 YBL028CP38202 106 aa3.8□□□□□ -1.8
snR42snR42 NMD2P38798 1089 aaKnown RBP3.8□□□□□ -1.8
snR42snR42 PIP2P52960 996 aa3.8□□□□□ -1.8
snR42snR42 NCS6P53088 359 aa3.8□□□□□ -1.8
snR42snR42 RPN7Q06103 429 aaKnown RBP3.8□□□□□ -1.8
snR42snR42 APC11Q12157 165 aa3.8□□□□□ -1.8
snR42snR42 GSC2P40989 1895 aa3.79□□□□□ -1.8
snR42snR42 PDR18P53756 1333 aa3.79□□□□□ -1.8
snR42snR42 RPS4AP0CX35 261 aaKnown RBP3.79□□□□□ -1.8
snR42snR42 RPS4BP0CX36 261 aaKnown RBP3.79□□□□□ -1.8
snR42snR42 RAD53P22216 821 aa3.79□□□□□ -1.8
snR42snR42 PYC2P32327 1180 aaKnown RBP3.79□□□□□ -1.8
snR42snR42 KTR2P33550 425 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 194.4 ms